Cucsat.G18280 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18280
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Alanine-tRNA ligase
Location	ctg3345: 4664786 .. 4666962 (-)
RNA-Seq Expression	Cucsat.G18280
Synteny	Cucsat.G18280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTTGGTATAAAACTAGTTTTTTTCCTCAAAAAAGAGAAAAAGAAAAGGGCTCATCAAGGGGTCAAGAGCCAGCGGGCGCATCGACCAAAACCCAGGGGCGGGGCTTAGTGAAACCAAGTTTTTGAGAATTTTGCAATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAACCAATCATCTCCTTCCTATCACCATCAATCTTCTTCATCAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAATACGCTGCTCAACAGGCGCTGCTATACCAACGGGCTATCGACCACTCTTTGGAGTCTGCCATTGAAGTCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTTTCCTCATTTTCAGAAGGCAGTTGTAATTTCTCCATCTCTTATTATTACTTTTGTTTTTTTTTTCTCTCCCGTTGTTCTTTGTTTAGTTTTCAATTAAGGATGGATGTTAGTTTAGGTCTCCAAGAAAAGGGGTTGAAAGGTTTTGAATCGTTACTCAAGGTATTGGACTGTAGTCTATTCGTAGATGATTTGGTTGACCGATGCTTGTATATCTAATAGTTAAAATAGCTCCAATGGTGGCCGTTGGCAAGGGTTGGAGTCTCTCCTCATACCGATTTTGAGGTTAAAAAATTCGAATCTTTAAGTGAGTTTAATGCCAAAAACTCTGTAATGTCTCCTGGGGACTAGGGGAGTAAAGCTGAATAATCGAACTCGAGACCTAGCCTGTTGAACGAATATTTTATGGCTCTCTTTAAAGTTTTTTTTACCACAATTGTTGGCTTTGGACATAAATGAAGATTGCATCTAATGACTAGCTCGGCTGCTTGAGTTATGTTTGAAATGTGCTGGAATTTAGTGAGCCAACGTATGTCCCCATGCATTTCTTAAGTCCAATTGATGTTTTTGGCAAATTGAAGAGTTAGTTCATAATTTTTTCTTTCAAGGATTGCATATGAAAATGTTTTTCTTGCCTCTTGAGGGTTGTATATTTTTACACCAAAATAGAGCATTGAAAATGGATGATTCAAGAACATTCCCAGTGGATGTTTCTTTTCCTTTAAAAATTCTAGAATTTCTCTCTTCTCATATCTTCTAAAGAATGGCTCTGATCGTGCTAGCCCGTAAATGCCCTTTTGATGCCTTAAAAGGGTGATCAGTGAACAACATTATGATTTACGCAATTGTGTCCAATGGACCAGCAATATGCCAACCAACAGTCTAGATTTCAGCTTATCCTTTTTGTAAAGTCAGCATCAGGAAGGAGAAATTTGATGCAAAGGGCATTTTTTTTTTTCACAACCTATCCAGCGAATTGAGGCAGGAGTGGACAATTCCCATAGTAGAAACTTGACTCTCTTTGGACTAGGAAACTTTCACAATTGTTTGAAGAGACCAAAGTTATTCCTGGTATGGTGTGATATTAAGGATTTGACAGTAAAAAATCCACTGTTATCCAAATTCCAGATCTAAATGTCCTCCCTCAGTGTGAGGAAGAATGAGAATGGGGATGAGTTGATGGATGGAGACCTTTTCGGAAATTTCATCCTCAAGGTTGCTTCTAAAGTTCAGCACCATAGACGAGTCAATCAAATATTTTTGGAATTTCAGATGCCAGTTATATGCTTGTTTTTTCTTGGCTTGATGGCATTTACATGTCCTAATCATTTACATCTCTTGTTTCCCACAATAAATAGTTGTGATTTATATTATTTTATTTTGTTTTCTTGCTAAACTAAATGATTCATACTTTTTATAATGAAAATCTCATTTGATAGCACCTTGTTCATTCTCTGTTTGCCTACTTTTGGCTTCTCTGTTTTTTTTTCTTATTTTATTGAACATTATGCTCTAGACTTATCATTTTATGCATTGAAAACATGCCTCTAGGATTCCTTTTGGGAGGCGAAGTCCGAACTTGCTGCTTATGAGAATTTAGTATTTGGAAAAATTAGAGGTTAGTTCCTCATATATCATTGTGATGGAAAATTGATTTTACCTTCCTTCGTTTTTTTCTTTTATTTTTTGTACTCGAATTTTTAAATAACTGAAAACTGTTTTGAATTTTTTCTGCAGATGGTATTCTTGTTGCTGCATCACATCCACTGATCAGTTGTGGAGTTGCAACTGGAATGGGTTTCTTAGTCTTTAAAAGTATGATATCATTTATTGATGGGTTTTAATTTGATGATAAGATTTTTTAATGCATAGTTATAAATTAATAGATTCGTTTACTTGAAATACACTTATGTCTAATAATTTTTCTATATTTCATATCTTCCAATATTAATTGCTTTCTTATGATACCAAATCATTCAAGTATGTCCGAAATGAGTCTGGATTTTTATGTGATTAAATCTTCGAAAAGCTCTCACATTATTCCACTACAATAAATTCACAGTTCACCTAGATTTTGAGGCTGCTTTTGTAGTGAGTACATGGAAATTGTAACATTCTGAATCTTGAATATTTACTTTTCAACAGTGTTTTAATGTTCTGTGTAATCCTGCAGAGCCCAGAAATTTCTTATACTACAAAACCATTCGACTTTTCGTGAATGAAGAGGTGAGCAAATTTTAATCTATCTGTTATGTGATATTACCTTCTTTCTGTAAGCTTAGACTTTTGGGTTGATTGGTATTTTAAGGGGATGTCCAAGAGCTTCTATGTTCAAACGTCTATAGTGTTATTTCACCTCCAATTATTATTGATTTTTACATGTTGGATCTTCTACATTTTTCAAGCCCACAGGAGGGAGATTGTTCAATGGTATAATATTAGATTTACTTTTACCCATAAACTTAAACTTTTGGGTCAGGCGGTGATTTAAGACTTCCATAACTACAAAAGAGAAAAAAGCCAAAAAAGAAAAAAAGTATAAGTGGAACTCCAACTTTGACGAATTAATTAATTAATTTTTTCTGTTATTCCAACTTTTACAAATTTTATCATGGAAAATCATATCTATATATTGGTTTTGCAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGGCAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTCTTAAGTCCTCAATTCATTATCGCTGATTGAAATATTAGTAAAATTGTCACATGAATACCTTTGATTATATATTTCTCCTTTCTGTATTAGAGATGTTGAGGTTAGGTAAGGGAGAAAGGAAATTCGTTATTGGAATCTTATTCCTTCCAAGGGATTTTCTTCTACATCTCTTTTGCAGTACGTACTAGATCCTTCTTCATTTAGAGAGTTTGTTTTCTCTGTTCTTTGGGAGGTGAACATCCCAACGAAGATGAAGTCTTCTTTGGGATTGTTTTGATGTTTGGTCCTTGGAAATATCTTCTTGTTGGGGCAACCATTTGCACCCTGTTTGCTCTGGCTTTTCACTTTTGATACCTATCTGACAGTAGGGATCTTTAACCGAGGTAAGTTGACTTTGCTCACATGTCAATGACATATACCTAAGCAAGGACGTGGTAACATGATTGGACTAACCGTATAAAAGAAGCTCACAATGGAATGACTATCATTATGGATTGTAGGGTTCAACCAAAAACCATCCAGAAAGGAATTATATTTCTCTTTTGTACTACTTGCAGCTCGAATTCGTCAGTTTTCCATGTTTTGAAACGTTTGTACTCTAAGAATGAAAAATTATTTTCTTTTCTATAATTTTCATTTCAGAAAAGAACACTTCAAGCTGAAGATGAATTGATACGAGGAAGAACAAAACTCAGGTTTGCTCAATATTTGTTGCTAATAGGCTGTTAGATATAATACCCTTATTGGTACCCCTTCTCATTTCTTTTTCTCTTGCAGGCAAGCAGGAAAACAAATTGAAGGTGTGATTCAGTCGGCTCATAAAATTGAAAGAAAGGCAAGAGGTATACAAATGAATTCTCTAGCCATGTTAAAATTGAAGAATGGTTAGAAAAATGCATGAAAATTTTGCTACATCTCAGCTCACGCTATTTTTTGTGTGCCATGACATCAGGTTTAAAAGATATTCTTGCAGATCTTCCCACTAGGGAAGCTTCACGATTTAGGACACAGGTGAGTGTTCCATTTGACTCTGCACTTTTTTGTTAGTGTTGCATCCTCGTTGAGTGAGCTTTCTGAATTCTCTCTTCCAAAGTATTGATTGAATAGTTTGGTCAGAATTTGGTTAGAAGAAACTTCAAAGTAGCAGCCTACCAACTTTAGTTTTTTCCTCGCAGTTCTATATTTTTTATAGTCATCAATCCCCCATCCTGTTTTGGTAATTCTCATTTGTGATGTATTGAAAACCCAGCGTGTGAGTGTGCACTAGATGAAATAAGCTCATTTTTTACTCCACATGAATCAATTGTAATATAAAACTTTTATTTCATCAATTTTAAACCTTATACTAGGATATGCAACCCTTTCCTCTCTCCTAGTCTCCCTTAAACCCTAAACCTCACCGTTATCCGTTGTCATCGTCCCTCTGCTGTTAGTCGATTTCTTGCGCTGCTGTTCGGTGACCAGCATGTTCTCTTTCAATTTTTCTTCTCTCGCCTTGCTTGACAGATCTTGGGCCCCTTCTCCTCCTAATCTTCTCCTCACCCTAAAATGCTAACCCTCCCTGCCCGCCGTCCCTTTCTGCTGACATTGCTAGTTGTTACCCTTTCACTGTTCACTTGTCTTTCATCAATCGTTTCTGTCGCTGTTTGCCGGTCGATTTTCCCCTTCCCCTTTTCTCATCTCCTCACCTTGTGCAGCTCTTGTGGAAGTTCTATTCTGTATTTTGTTCTTTTTGGGTTTTCTTGTAGCTGTTTCTTTTTTGTTTTTTAATTTTTACCACCTTGTGGAGTTTGTATCTTTGAGTTCCAATCTCTTTTTCATTTATTCAATGAAAGTTTTGTTTTTTTTGTTTTTATTTGTATAAATATTTTTATGTTTATGTTTTTAATTTTTTTAATCTTATCCTCGAGTTTGTAATGCATTTCACATCCTCAGTTCAGTTGGATGTGAATCATGTGACGCACGGACAGCCTCTCTTAATTGTGTTATTCTGTTGCTAGAATTGAGGATTAGGCTCTAAGTATTTTCATGATTGGGGCTGGGCATTTATTTGACATGATATTGGTTGCTTTGTCAATTAAATTTTCTATGCTTTAGTGCTTGGTTCACGAGTGATATTAATTCAGAGACTTGTTCTAGTTCAAGGTTTAAATCCATGAAATTGAAAGGTTAAAATTGTTAAAAACAATTGGTATAAATCAAACATTTCCCTATATATTTCCATATACACTAATCTTGGAATCTGCATTTGCAGGTCTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGGTTAAGCAAGGAGGTCTCAAAAATAAGCAACTATGGCATCTCTGTCTGATAAATTCAAATCAAACATTTGACTCAGCCTCAACAATATTACTCCATCCCAGAATTCACTTGATATGGTCTGAAACCACTACCTGCATATCCTTTCTCATCAGTTGGTAGAAGGATGAGTTCTTTTTCTTGTTTTTAAAGTGCTCGACCAAAATAAGTTTTTAAGTTTTTCTGTTGAGTTACACCACTGAAAGGTGAATCTGATTGTTCAGTACAATAATTGTAGATGCAATATCAATAGAGTTGGTCCTTTCGATAGAATGGTAATTCCTTCTAACAAAGTGTACTTGTTACAAGAATTGTGAGTTCAGCGAGCAGTGCTCATTCTGCATTTACTTAATACTACTTATAGACCAAATGGTAATCGTGTTTGTTGAAAATGTCGTTACTGTGAGATGAGTATCTTGGAATACAAAATGGATACTCATTAATATTCAGATTGGCACCAGCTAAAACAACCACTCTTT

Coding sequence (CDS)

ATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAACCAATCATCTCCTTCCTATCACCATCAATCTTCTTCATCAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAATACGCTGCTCAACAGGCGCTGCTATACCAACGGGCTATCGACCACTCTTTGGAGTCTGCCATTGAAGTCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTTTCCTCATTTTCAGAAGGATTCCTTTTGGGAGGCGAAGTCCGAACTTGCTGCTTATGAGAATTTAGTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCACTGATCAGTTGTGGAGTTGCAACTGGAATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCATTCGACTTTTCGTGAATGAAGAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGGCAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTCTTAAGTCCTCAATTCATTATCGCTGA

Protein sequence

MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIEVSKSRLSQIRSTSFPHFQKDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVATGMGFLVFKKPRNFLYYKTIRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEVGLYISLKSSIHYR

Homology

[Close]

BLAST of Cucsat.G18280 vs. NCBI nr
Match: XP_011656868.1 (RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 244 bits (623), Expect = 4.31e-79
Identity = 129/135 (95.56%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQSSPSYHHQSSS KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQKDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120
           IEVSKSRLSQIRSTSFPHFQKDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQKDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 121 TGMGFLVFKSMISFI 135
           TGMGFLVFK   +F+
Sbjct: 121 TGMGFLVFKKPRNFL 135

[Close]

BLAST of Cucsat.G18280 vs. NCBI nr
Match: XP_011656867.1 (RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothetical protein Csa_005221 [Cucumis sativus])

HSP 1 Score: 239 bits (610), Expect = 4.33e-77
Identity = 129/137 (94.16%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQSSPSYHHQSSS KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           IEVSKSRLSQIRSTSFPHFQK  DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQKAVDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKSMISFI 135
           VATGMGFLVFK   +F+
Sbjct: 121 VATGMGFLVFKKPRNFL 137

[Close]

BLAST of Cucsat.G18280 vs. NCBI nr
Match: XP_008459726.1 (PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo])

HSP 1 Score: 238 bits (608), Expect = 8.72e-77
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQSSPSYHH+SSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           IE SKSRLSQIRSTS+PHFQK  DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKSMISFI 135
           VATGMGFLVFK   SF+
Sbjct: 121 VATGMGFLVFKKPRSFL 137

[Close]

BLAST of Cucsat.G18280 vs. NCBI nr
Match: TYK24760.1 (uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (599), Expect = 1.90e-75
Identity = 126/135 (93.33%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 3   MDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 62
           MDAGSSSSQENQSSPSYHH+SSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  VSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 122
            SKSRLSQIRSTS+PHFQK  DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGFLVFKSMISFI 135
           TGMGFLVFK   SF+
Sbjct: 121 TGMGFLVFKKPRSFL 135

[Close]

BLAST of Cucsat.G18280 vs. NCBI nr
Match: XP_038875078.1 (LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida])

HSP 1 Score: 210 bits (535), Expect = 2.09e-65
Identity = 114/137 (83.21%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           +AMDAGS SSQENQSSPSYHH+SS  KPQSLEDLAK  AEYAAQQALLY RAIDH L+SA
Sbjct: 24  LAMDAGSPSSQENQSSPSYHHESSPGKPQSLEDLAKRLAEYAAQQALLYXRAIDHXLKSA 83

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           IE SKSRLSQIRSTS+PHFQK  D FWE KSELAAYEN++FGKIRDGILVAASHPLISCG
Sbjct: 84  IEASKSRLSQIRSTSYPHFQKAIDFFWEGKSELAAYENVLFGKIRDGILVAASHPLISCG 143

Query: 121 VATGMGFLVFKSMISFI 135
           VATGMGFLVFK   +F+
Sbjct: 144 VATGMGFLVFKKPRNFL 160

[Close]

BLAST of Cucsat.G18280 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 4.22e-77
Identity = 128/137 (93.43%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQSSPSYHH+SSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           IE SKSRLSQIRSTS+PHFQK  DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKSMISFI 135
           VATGMGFLVFK   SF+
Sbjct: 121 VATGMGFLVFKKPRSFL 137

[Close]

BLAST of Cucsat.G18280 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 9.22e-76
Identity = 126/135 (93.33%), Postives = 129/135 (95.56%), Query Frame = 0


Query: 3   MDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 62
           MDAGSSSSQENQSSPSYHH+SSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  VSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 122
            SKSRLSQIRSTS+PHFQK  DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGFLVFKSMISFI 135
           TGMGFLVFK   SF+
Sbjct: 121 TGMGFLVFKKPRSFL 135

[Close]

BLAST of Cucsat.G18280 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 2.34e-59
Identity = 106/137 (77.37%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSS ENQSS S HH+SS  KPQ+LEDLAK WA YAAQQA+LYQ AI+HSLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           +E SKSRLSQIRSTS+PHFQK  DSF + KSE+A +ENL FGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKSMISFI 135
           VATGMG LVFK   +F+
Sbjct: 121 VATGMGLLVFKKPRNFL 137

[Close]

BLAST of Cucsat.G18280 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1)

HSP 1 Score: 191 bits (484), Expect = 2.69e-58
Identity = 104/137 (75.91%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSS EN SS S HH+SS  KPQ+LEDLAK W  YAAQQA+LYQ AI+HSLESA
Sbjct: 1   MAMDAGSSSSLENPSSLSNHHESSPGKPQALEDLAKSWVGYAAQQAMLYQLAINHSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           +E SKSRLSQIRSTS+PHFQK  DSF + KSE+A +ENL+FGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLLFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKSMISFI 135
           VATGMG LVFK   +F+
Sbjct: 121 VATGMGLLVFKKPRNFL 137

[Close]

BLAST of Cucsat.G18280 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 1.42e-55
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSSPSYHHQSSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MA D+GSSSS+E  SS S  ++SSS KPQSL  LAKPWA+YAA QALLYQR ID SLESA
Sbjct: 1   MATDSGSSSSEEELSSSSPLNESSSGKPQSLASLAKPWADYAAHQALLYQRTIDDSLESA 60

Query: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120
           I+ SKSRLSQIRSTS PH QK  DSF +AKSELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IQASKSRLSQIRSTSHPHLQKTIDSFQDAKSELAAYENLLFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKSMISFI 135
           VATG+GFLV K   +F+
Sbjct: 121 VATGLGFLVLKKPRNFL 137

The following BLAST results are available for this feature:

BLAST of Cucsat.G18280 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G18280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656868.1	4.31e-79	95.56	RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus]	[more]
XP_011656867.1	4.33e-77	94.16	RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothe...	[more]
XP_008459726.1	8.72e-77	93.43	PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo]	[more]
TYK24760.1	1.90e-75	93.33	uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa]	[more]
XP_038875078.1	2.09e-65	83.21	LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida]	[more]

BLAST of Cucsat.G18280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAD0	4.22e-77	93.43	uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=...	[more]
A0A5D3DNB0	9.22e-76	93.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1H5U3	2.34e-59	77.37	uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1L5I2	2.69e-58	75.91	uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304...	[more]
A0A6J1DXH1	1.42e-55	75.91	uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR34554:SF1	ALANINE-TRNA LIGASE	coord: 3..177
None	No IPR available	PANTHER	PTHR34554	RGS1-HXK1-INTERACTING PROTEIN 1	coord: 3..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18280.T3	Cucsat.G18280.T3	mRNA
Cucsat.G18280.T2	Cucsat.G18280.T2	mRNA
Cucsat.G18280.T1	Cucsat.G18280.T1	mRNA
Cucsat.G18280.T6	Cucsat.G18280.T6	mRNA
Cucsat.G18280.T5	Cucsat.G18280.T5	mRNA
Cucsat.G18280.T4	Cucsat.G18280.T4	mRNA
Cucsat.G18280.T7	Cucsat.G18280.T7	mRNA
Cucsat.G18280.T9	Cucsat.G18280.T9	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity