Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGCCACTCCATTCTTTCTCTGTCCTATAAAATCCACTCTGCTTCGTCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTTCCACAAGGATTTAGCAATGGCTACTGCTGAGGTAAATTTGGCTTCCCATAACTATGCATAATGTTTCTCTCTCTCTGCTTTTTTTTCTTCTTTAAATTAATCATAATTAAAAATCATATAACTATGTTTCTCGATACATTTGAACTTCTTTTATATATGGATATGTGAAATTCTTTTTAAATATTTTGAATAAATTTGGAACTGGGTCATTGTTCTTTGCAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAGGTTGAGGAAGAAGAAGCTCCGCCTCCGGTGGAAGAAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCAGTGGAAGAGGCAGAAACTCCGGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGAAGTAGTAGAAGAAGAGGAAAAGGAAGAGAATAAAACAGAAGAGGCAGCTGAGGTTGTGGTGGAGGAAGAGACGAAAGCACCGGTGGAGGAGGCAGAGGAGAAGGCCGTGGAAGTGAAGCCTGCAGAAGAAGCAGAAGAGAAGGCAGAAGAAGAGGTTGGAGCAGAGAAGGTTGAGTAATTAAAACCTGAATACATATTATTGGGTGTAATATGAAAAAAGTGAATGGAGGGTGGTTTGAGAAATTTGGTAACTTTAAATTGTAGAGAGTTTTGTTTTTGTAATATGAAAAGTGGTTGATTGAATGGGGATTGAAATGGAGTGTAGTAAGCTATAAAAGGAGTATAGGGATTGGGGAACTTTGTATTTCTGTTTCTTGGATGTCTGTTCACAGTTGCAAATTTTTTCTTTTTTGCTAGTTTGTTTATTATAATAACTTGCAAGTTATAATATCTATATATATATATATACTTGTTTCTTTTTTTTAAAAAATAATATATTATTATTTCAATATTGTGATTTTGTTGATTCTCTTCTCCTAAACATATAATGATCAATAAATATATATATAGAGAA
Coding sequence (CDS)
GCCACTCCATTCTTTCTCTGTCCTATAAAATCCACTCTGCTTCGTCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTTCCACAAGGATTTAGCAATGGCTACTGCTGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAGGTTGAGGAAGAAGAAGCTCCGCCTCCGGTGGAAGAAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCAGTGGAAGAGGCAGAAACTCCGGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGAAGTAGTAGAAGAAGAGGAAAAGGAAGAGAATAAAACAGAAGAGGCAGCTGAGGTTGTGGTGGAGGAAGAGACGAAAGCACCGGTGGAGGAGGCAGAGGAGAAGGCCGTGGAAGTGAAGCCTGCAGAAGAAGCAGAAGAGAAGGCAGAAGAAGAGGTTGGAGCAGAGAAGGTTGAGTAA
Protein sequence
ATPFFLCPIKSTLLRHSSIPSFLSLLQFLLLFHKDLAMATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEAEEKAVEVKPAEEAEEKAEEEVGAEKVE
Homology
BLAST of Cucsat.G18274 vs. NCBI nr
Match:
XP_004140479.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothetical protein Csa_004785 [Cucumis sativus])
HSP 1 Score: 220 bits (560), Expect = 2.25e-70
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV
Sbjct: 1 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEA 157
EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEA
Sbjct: 61 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEA 120
Query: 158 EEKAVEVKPAEEAEEKAEEEVGAEKVE 184
EEKAVEVKPAEEAEEKAEEEVGAEKVE
Sbjct: 121 EEKAVEVKPAEEAEEKAEEEVGAEKVE 147
BLAST of Cucsat.G18274 vs. NCBI nr
Match:
XP_008455963.1 (PREDICTED: patellin-1-like [Cucumis melo])
HSP 1 Score: 164 bits (414), Expect = 4.46e-48
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1 MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 157
EE ETPVE ETKEVVVEEE+KEEKNEEE VVEEEEKEE KTEEAAE V EETKA
Sbjct: 61 EETETPVEFETKEVVVEEESKEEKNEEE-VVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
Query: 158 PVEEAEE-KAVEV---KPAEEAEEKAEEEVGAEKVE 184
PVEE EE KAVEV KP EE EEK EEEV AEK E
Sbjct: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
BLAST of Cucsat.G18274 vs. NCBI nr
Match:
KAA0053292.1 (patellin-1-like [Cucumis melo var. makuwa])
HSP 1 Score: 164 bits (414), Expect = 3.71e-46
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1 MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 157
EE ETPVE ETKEVVVEEE+KEEKNEEE VVEEEEKEE KTEEAAE V EETKA
Sbjct: 61 EETETPVEFETKEVVVEEESKEEKNEEE-VVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
Query: 158 PVEEAEE-KAVEV---KPAEEAEEKAEEEVGAEKVE 184
PVEE EE KAVEV KP EE EEK EEEV AEK E
Sbjct: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
BLAST of Cucsat.G18274 vs. NCBI nr
Match:
XP_038900947.1 (cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benincasa hispida])
HSP 1 Score: 134 bits (336), Expect = 1.83e-36
Identity = 107/152 (70.39%), Postives = 110/152 (72.37%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVV PET LPEEATEV VEVPPPKVEEEEAPPP DPPAEEVAKEE+ TDPPA
Sbjct: 1 MATAEVVPPETVLPEEATEV--VEVPPPKVEEEEAPPPAAVDPPAEEVAKEEEATDPPAA 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETK-----A 157
EE ETPVEVETKEVVVEEE KEEK EEEE K EEA E VVEEE+K A
Sbjct: 61 EETETPVEVETKEVVVEEEPKEEKKEEEE----------KEEEAGEAVVEEESKPAEAEA 120
Query: 158 PVEEAEEKAVEVKPAEEAEEKAEEEVGAEKVE 184
P EE + VE KP EE EEK EEE AEK E
Sbjct: 121 PAEEEAVEVVEEKPVEETEEKPEEEPAAEKAE 140
BLAST of Cucsat.G18274 vs. NCBI nr
Match:
KAG6604898.1 (hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 69.7 bits (169), Expect = 2.66e-11
Identity = 95/175 (54.29%), Postives = 103/175 (58.86%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVT E AL EE TE V+VPP KVEEE AP V DPPAEE+AKEE A
Sbjct: 1 MATAEVVTQEAALQEEVTE---VQVPPLKVEEE-APAAV--DPPAEELAKEE------AA 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEE- 157
E AE PVEVETKEVV EEE +EE+ +EE V EE K EAAEV EE+ +AP E
Sbjct: 61 EVAEPPVEVETKEVVAEEEEEEEEAKEEVV------EEKKEVEAAEVEAEEKEEAPAESE 120
Query: 158 ------------------------AEEKAVEVKP--AEEAEEK-AEEEVGAEKVE 184
AEE+AVEVK AEEAEEK AEEE AEK E
Sbjct: 121 PAVAAAAEEEEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEPAAEKAE 157
BLAST of Cucsat.G18274 vs. ExPASy TrEMBL
Match:
A0A0A0KAS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1)
HSP 1 Score: 220 bits (560), Expect = 1.09e-70
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV
Sbjct: 1 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEA 157
EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEA
Sbjct: 61 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEEA 120
Query: 158 EEKAVEVKPAEEAEEKAEEEVGAEKVE 184
EEKAVEVKPAEEAEEKAEEEVGAEKVE
Sbjct: 121 EEKAVEVKPAEEAEEKAEEEVGAEKVE 147
BLAST of Cucsat.G18274 vs. ExPASy TrEMBL
Match:
A0A1S3C239 (patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1)
HSP 1 Score: 164 bits (414), Expect = 2.16e-48
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1 MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 157
EE ETPVE ETKEVVVEEE+KEEKNEEE VVEEEEKEE KTEEAAE V EETKA
Sbjct: 61 EETETPVEFETKEVVVEEESKEEKNEEE-VVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
Query: 158 PVEEAEE-KAVEV---KPAEEAEEKAEEEVGAEKVE 184
PVEE EE KAVEV KP EE EEK EEEV AEK E
Sbjct: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
BLAST of Cucsat.G18274 vs. ExPASy TrEMBL
Match:
A0A5A7UC23 (Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001030 PE=4 SV=1)
HSP 1 Score: 164 bits (414), Expect = 1.79e-46
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1 MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 157
EE ETPVE ETKEVVVEEE+KEEKNEEE VVEEEEKEE KTEEAAE V EETKA
Sbjct: 61 EETETPVEFETKEVVVEEESKEEKNEEE-VVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
Query: 158 PVEEAEE-KAVEV---KPAEEAEEKAEEEVGAEKVE 184
PVEE EE KAVEV KP EE EEK EEEV AEK E
Sbjct: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155
BLAST of Cucsat.G18274 vs. ExPASy TrEMBL
Match:
A0A6J1I4V1 (fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469887 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 1.62e-11
Identity = 94/172 (54.65%), Postives = 99/172 (57.56%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVT E AL EE TE VEVPP KVEEE P DPPAEEVAKEE A
Sbjct: 1 MATAEVVTQEPALQEEVTE---VEVPPLKVEEEA---PAAADPPAEEVAKEE------AA 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEE- 157
E AE PVEVETKEVV +EE +E K EEVVEE K EAAEV EE+ +AP E
Sbjct: 61 EVAEPPVEVETKEVVAKEEEEEAK---EEVVEE-----KKEVEAAEVEAEEKEEAPAESE 120
Query: 158 ---------------------AEEKAVEVKP--AEEAEEK-AEEEVGAEKVE 184
AEE+A EVK AEEAEEK AEEE AEK E
Sbjct: 121 PAVAEEEEEEEEEAKPEAEPAAEEEAAEVKETGAEEAEEKPAEEEPAAEKAE 152
BLAST of Cucsat.G18274 vs. ExPASy TrEMBL
Match:
A0A6J1G7J6 (enolase-phosphatase E1-like OS=Cucurbita moschata OX=3662 GN=LOC111451476 PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 5.85e-09
Identity = 91/170 (53.53%), Postives = 95/170 (55.88%), Query Frame = 0
Query: 38 MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 97
MATAEVVT E AL EE TE VEVPP KVEEE PAEEVAKEE A
Sbjct: 1 MATAEVVTQEAALQEEVTE---VEVPPLKVEEEA---------PAEEVAKEE------AA 60
Query: 98 EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKAPVEE- 157
E AE PV VETKEVV EEE +EE EE VVEE K EAAEV EE+ +A E
Sbjct: 61 EVAEPPVAVETKEVVAEEEEEEEAKEE--VVEE-----KKEVEAAEVEAEEKEEAAAESE 120
Query: 158 -------------------AEEKAVEVKP--AEEAEEK-AEEEVGAEKVE 184
AEE+AVEVK AEEAEEK AEEE AEK E
Sbjct: 121 PAVAAEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_004140479.1 | 2.25e-70 | 100.00 | cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothe... | [more] |
XP_008455963.1 | 4.46e-48 | 82.05 | PREDICTED: patellin-1-like [Cucumis melo] | [more] |
KAA0053292.1 | 3.71e-46 | 82.05 | patellin-1-like [Cucumis melo var. makuwa] | [more] |
XP_038900947.1 | 1.83e-36 | 70.39 | cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benin... | [more] |
KAG6604898.1 | 2.66e-11 | 54.29 | hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KAS3 | 1.09e-70 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1 | [more] |
A0A1S3C239 | 2.16e-48 | 82.05 | patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1 | [more] |
A0A5A7UC23 | 1.79e-46 | 82.05 | Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G0010... | [more] |
A0A6J1I4V1 | 1.62e-11 | 54.65 | fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A6J1G7J6 | 5.85e-09 | 53.53 | enolase-phosphatase E1-like OS=Cucurbita moschata OX=3662 GN=LOC111451476 PE=4 S... | [more] |