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Cucsat.G18235 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTATACAATTTTCCCACTTACATTCCAAAAATAGAATATCAAACCGAAGTCGGAAGGGTTTGTTTTCGCTTACGGTAAATTCGAAGAGAAGCGAGTAACGGAGAGATGTTTACTTAAATAAATCCCCTGTTTAAGAAACATTTCATTCTTTCTCTTCGCAATTAAGGAATCTATCTACTTCAAGCAGAACGAACGAACACTTGGGGAAGAAATTGAAGGGTCTGATTTGCCGGCTTCAATGGCTGTCGCCGATGAGAAATCAGGCCCCGATGGGAAGGTTTGGTCCCTTTGCAGTATTCCCTTTTGGCAAAACAGCAATGCTCCGTCTTCTTCTTCTTCTTCTTCTTCCTCTTCGTCGTCGTCTGTTATTCATAGAGTTCATCTGCAAAGTAATGGGCATAAACCAGCAGAGCATTCGAGTTCTCATCCTGGAGTGGTTTCGGCAATTGCAAAATCTCTATGCCCTACTAAACGAAGGCTTCGTCTGGATCCTTCCAACAAGCTCTACTTTCCATGTATGTCTCTGGTGGCTCTTCTCTCTTGTGCTTTGGTTAATTTCCCGCCTCATGGGTTACTTGGTTTTTGGTTTATTTATACGGTTTTGGTGTTTCCTTGATTAAGGTAGTTGATTGTTTCATCTGGGTGGTCATGTTTCTGTGTTCATAATGAGATTTTTGTTGCCTTTCCGTTTTGTTCTTGTGTTTGGTTTCTGAAGGATAGAAAAGCCTGTGTGGTTTTTTGCCCTTTTCCTCTTTCTCATTGTGGAAGCTCTAATGTTTTGGTTTCTTGCTTTTCGGAACCGGCAATAGATTGAGTTATAAAGGAAGTTAATGTGTTCATTTTGTCATCCTCCCCTGGTTTTTGGTGAAGCTTGAAAAGGATGATATAATTCATGTCTACTTAGTCACTCTCTAAAATATGTTGTCTAAATTTTAAACTAATGCACTAAAAAACGATCTGTTATTGTTTGGGTTTATAGAATGTTGTTTCTTTTCTTTTCTTTTAGTTCATTTTTTCAGATCGCCTCCTCTCTATGTAGTTATAAAGGATAGATTGTTTCGTCCTCGAACAAGAATGGGGCCCTTGAATTGCATATATTGCTTGTTGCATCATTTTAGTTGTTGAGTAGGCATGTTTTTCCTCACTATTGTGTTCTGATTTCATTCTTTCTTATCTTCTTTCCCCTTAAAGTTGAACCTGGGAAGCAGGTCAAGAGTGCTATTGAGATAAAGAATACAAGCAAGAATCATGTGGCTTTCAAAGTATGGAGCATTTTCCGCTTGAACTTTTATCAGTATGAATAGTTTAATTATAGATGCCGAAGTACCTTTGTTGTTTTGATCTACTCGATGCAGCCATCTTACCTGTGACCCCTTAAATTGTTGTAGTTCCAAACGACCGCACCGAAGAGCTGCTACATGCGTCCTCCTGGTGGTATACTTGCTCCTGATGAAAGTATTATTGCAACCGGTAAGACACTTGTGTTTGATCCGTATCCCCAGAATTAACATTGCAAGTAGAAGCAATGTAATTTAATCATCTGAAATTTTACTGAGGTTCCTGTCTCTGTGACTTGACTTCAGTATTCAAGTTTGTGGAGCCACTAGACAACAATGACAAACATGTAGATCATAAGAGAAGGGTTAAGTTCAAGATTGTGAGCTTGAAAGTGAAGAGCGACTTGGATTACGTGCCTGAGCTGGTATGTCTTGCATTCTCAATTCGCAATTGGTCTACATTTTCTCCATGCTTGGAGTTTGTGACCAATGTTTGTATCATTATTATCTCAAGAGAAGATTTACTATTTCATTGATCTATGAAATTTAACGTCTGCTGACATTTCAAGATAACTTCTTGAGGTATAGTTTTGTTGCATTCACAATGACTAAAATGTATGTTAGGCTAATTAAATACTTATAGTAACATACTATCAATCCGTGATGCAAATTTTCCATTTATCAAGCGGACAACGGTTTTATGATCTTCTAGTTTCCGTATTTGAACGCTAATTATAGTTCTCATTATATGATTAACTTTCTGATGGTAATTTTAAATAATGACATTTCACAGTTTGATGAGCAAAAAGATCGTGTAGCAGTTGAGCAAATACTGCAAGCTGTTTTTCTTGACCCGGACCATTCTAATCCTGTAAGTAGTAACATGAGATAAACACTGTATCTAATGATTGCTTCTCGCACCAGTCTCCTTATCAGTTCAAATTCTTCTCCTTTATGTTCTCTCCAGGCACTGGAGAAAGTCTGTCGACAACTAGCTGAGGCTGAGGCTGCGGCTGAGATGCGCCACAAACCTGCTGAAGAAACAGACCCGAAAATTGTTGGTGGAGGACTGGTTCTCGATGAATGGGTGAGATAATCGAACTGTTGTCCACACCTTCTTCAAACCTTACTAAGTTTTAAAATCATTTGAAACATTTTGATTTTCTGATATACTGTGCTATGGCTCTTCATTTGTAGAAAGAAAGGAGGGAAAGATATCTAGCTAAGCAACAGGTTGGAGGTGTAGATTTGGTGTAAAATTCAGTTGCTTGTGTTAAGGAAGTTGAAATCACATTGATGTGTGAACTTTTCCATTTGTCGAAGGATTGCCCATCGACATTATCGATGAAAAGCGAATCGCTTAACGACTAGGTTTGTGATGGAGTTTCATGATCTTGTGTGAGTTTGATTGGGTTGCCATTTCTCAAAGTTTGAAGGTTTTACAGTTGGTTTGAAACGCTATCACCATTTGATGTAAATAGAGGCTGTGCTGTTGCTTCTTCACCCTAAATTAGTTCGACACAAAATTTGGCAAGTCTCCTCCATCTACAATTTAATTTAAAAATACTTTTTTTTCTACTTGATGGTTTTGCTGTTTGTGATAAGATTTAGGATAAATTAGCCAAAGAATTATCAAGTCTTCAAATGGAACATATCCTTATGCTTATTTGTGAATCTTACCCAGAAGCATATCTAAATGAAACATTTTAGTCCACTTGGTGTGTGGAATCTGTTTGGTCTGTCCTTTTCTTTGAAATCTTTTCCTCAGTGGTTTCATATCATAT ATGGAGCATTTTCCGCTTGAACTTTTATCATTCCAAACGACCGCACCGAAGAGCTGCTACATGCGTCCTCCTGGTGGTATACTTGCTCCTGATGAAAGTATTATTGCAACCGTATTCAAGTTTGTGGAGCCACTAGACAACAATGACAAACATGTAGATCATAAGAGAAGGGTTAAGTTCAAGATTGTGAGCTTGAAAGTGAAGAGCGACTTGGATTACGTGCCTGAGCTGTTTGATGAGCAAAAAGATCGTGTAGCAGTTGAGCAAATACTGCAAGCTGTTTTTCTTGACCCGGACCATTCTAATCCTGCACTGGAGAAAGTCTGTCGACAACTAGCTGAGGCTGAGGCTGCGGCTGAGATGCGCCACAAACCTGCTGAAGAAACAGACCCGAAAATTGTTGGTGGAGGACTGGTTCTCGATGAATGGAAAGAAAGGAGGGAAAGATATCTAGCTAAGCAACAGGTTGGAGGTGTAGATTTGGTGTAA MEHFPLELLSFQTTAPKSCYMRPPGGILAPDESIIATVFKFVEPLDNNDKHVDHKRRVKFKIVSLKVKSDLDYVPELFDEQKDRVAVEQILQAVFLDPDHSNPALEKVCRQLAEAEAAAEMRHKPAEETDPKIVGGGLVLDEWKERRERYLAKQQVGGVDLV Homology
BLAST of Cucsat.G18235 vs. ExPASy Swiss-Prot
Match: Q8VYN2 (Vesicle-associated protein 4-2 OS=Arabidopsis thaliana OX=3702 GN=PVA42 PE=1 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.2e-51 Identity = 97/133 (72.93%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy Swiss-Prot
Match: Q1ECE0 (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 5.3e-46 Identity = 90/134 (67.16%), Postives = 110/134 (82.09%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy Swiss-Prot
Match: Q8LPQ7 (Vesicle-associated protein 4-3 OS=Arabidopsis thaliana OX=3702 GN=PVA43 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 5.7e-40 Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of Cucsat.G18235 vs. NCBI nr
Match: XP_011656923.2 (vesicle-associated protein 4-2 [Cucumis sativus] >KGN46696.2 hypothetical protein Csa_020729 [Cucumis sativus]) HSP 1 Score: 272 bits (695), Expect = 1.07e-89 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cucsat.G18235 vs. NCBI nr
Match: KAA0047916.1 (vesicle-associated protein 4-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 269 bits (688), Expect = 1.12e-88 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G18235 vs. NCBI nr
Match: XP_008448221.1 (PREDICTED: vesicle-associated protein 4-2-like [Cucumis melo] >TYK02188.1 vesicle-associated protein 4-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 269 bits (688), Expect = 1.12e-88 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G18235 vs. NCBI nr
Match: XP_038900695.1 (vesicle-associated protein 4-2-like [Benincasa hispida]) HSP 1 Score: 253 bits (646), Expect = 2.08e-82 Identity = 123/133 (92.48%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of Cucsat.G18235 vs. NCBI nr
Match: XP_022970681.1 (vesicle-associated protein 4-2-like [Cucurbita maxima]) HSP 1 Score: 233 bits (593), Expect = 2.93e-74 Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy TrEMBL
Match: A0A0A0KE43 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G123970 PE=4 SV=1) HSP 1 Score: 272 bits (695), Expect = 4.83e-90 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy TrEMBL
Match: A0A5A7U105 (Vesicle-associated protein 4-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001980 PE=4 SV=1) HSP 1 Score: 269 bits (688), Expect = 5.42e-89 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy TrEMBL
Match: A0A5D3BT76 (Vesicle-associated protein 4-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00900 PE=4 SV=1) HSP 1 Score: 269 bits (688), Expect = 5.42e-89 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy TrEMBL
Match: A0A1S3BJS8 (vesicle-associated protein 4-2-like OS=Cucumis melo OX=3656 GN=LOC103490476 PE=4 SV=1) HSP 1 Score: 269 bits (688), Expect = 5.42e-89 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of Cucsat.G18235 vs. ExPASy TrEMBL
Match: A0A6J1I192 (vesicle-associated protein 4-2-like OS=Cucurbita maxima OX=3661 GN=LOC111469594 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 1.42e-74 Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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