Cucsat.G18117 (gene) Cucumber (B10) v3

Overview
NameCucsat.G18117
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionProtein of unknown function (DUF 3339)
Locationctg3345: 644333 .. 648038 (-)
RNA-Seq ExpressionCucsat.G18117
SyntenyCucsat.G18117
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTGTCTTTCTCTCTATTCCTCCTGAGCTTGTACTTTATGTTTTTGCATTGTATTGTTTTCCTCTTATCTATTTAATTGTTGTTATGTTATATATTTGTGTTTTTCTAATGATAGTATCTTTAACTTCTTTTTTTTCTACGATGTGATGAGATTTTTGAAGAGTTAGGGAATTTAATTGCTAAATTAATCTCCCGCTTTGGACAATGATTGAAAAGAAATTCATTAAATTATTTCGAATCAATGCATACAACATTAATCCAACATGGTAATATCATGGGACTGCCTCTTTTTTTTATTTATTTATAATTTCCCTACAATTGTTCTTCTGGGTTTTTTCCAAAAAGAAAACAAATACAATGAGAATTATAAGTAGTACTAATCTCTAATTAATTTAATTATGTCAGTAAATCTGTTTTACTTGTGTTGGGTAAGAAAATAAAAGATTTTACTGGTTCATTTTCTTTTTTGTTCTTTTTGTTTATAGGAAAAAACTAAAAGTTGCATACATCTGTTTAACACACACATATATATAAGTTCATGTGGAATATGATCGTTGTTATACGAAGAAAATCTCTACACTTTCCTTTTATTTTACGTTTGGGTCCGTTAGTAATTCATATTTCACCTTTTTTGTTACAACTATTTGGACTAACCACTATTTAGATTAAGATGGTTACACATGAATTGTTTTAGCTTTTCATCTATAAATGTTATAATTTAATAATGTTATTGAATGAACAGTCATGTTTCTTTGTCCTTTCATAACTATTAAGACTGAGTGGTTACATAAAGAAATGGAATATCATTTTACATGGGGTGTGGTCTAAACCATACTTATGAAGCATTATATGAAGCATTATGATCTAATCTTGGACATATACTTAAACAAACAAATTATGTGCTTCATTATGCCGTTATTGGTTAAAGTGGTTACTAATGAAGTAATGTATTATAATAGATACGGAAGATTACATCTTAATGTATCATTTTGTTTTTAATTCCTATTTCATCTTTTTGTAATATAAAATGATTATTTCATTAAACTACAATATTGTTAGAACTTTTTGCAATTGTATATATTCAAATAGAACTATAAATTTAATTTGTATCACGTGTGTTTTGGTCTAGTCTATTTATATAAAAGGAGGAAAAGTAAGAAAATATCAACTTTGATATAGTACGTAGTATCGATAAATAACATGTAAAGACAAGACTTGTAGTTTACACAATTATTATACTATCTATGGATAAATGACATGTAAAGACTTCGATTTTATTAATTAAACTCTAAATTTTTAAAACTCGATCATTTAAAATTTATTTGGAAGGTTGTTTATGCATTTTTTTCTAATTATACACTTTAGTAATCCCAGTCAGCACAATTTTGAATGCATAAACGCTTTTGGGATGTAGTGATCTTATAAATAATTTTGATTCATTTACTTATAATAATCTTTATAACAATTAAAGGGTTCTATTTCCTTTTACAACAACAGAGTCTATATTACTATATTTTCTAAATTACAAAAGTAGTAAATTTAAAAATCGATAATCTTATAATTATCGCTTTAGTAGCTCTTCGATAGTTTTATAATTACCATCTGATATCACTAATTTTATCATATTTGCAATATGCAAAAAAAAAAAAAAATGGGATGAGTGATTTTTTTCAAAATGTTTTTGTAATTTTTCTAATCTAAAAGTTTAATTTATAATTATTTTTAAACATCCCAAAATAAATCAATTTTTTTACAAATGTAACACAATCTTACTTTCTATTAATGAATGATAGTTTTGTTAGATAGACTCCTACCATGGATGGCTAGGATTGAATTATAGACATTGACATTTGGTTATATTTAAAAATATTTTCAACAATAAAATTGCCTTTTAATTATATATTTTTCCAAATATATTTTCTTAATCAAAATTTCCGTTGTTTTGGAATGGTGAGATTTGGAAGGATTTCAAATAAAATGTAACTTTAAATGGATGGATTATGTTTGATGAAAAAGAAAGTGAATAATTGAAAAATCAGTTGTGATTTCAATTTCTTGTTTTGACTAAAAAAACATCCATTCTAATTTGGAAGGATTTCATGCTTTTAAGATTTTGTTATGAATTTAAACCCTTTTACGATTCATCTCACCGTATTATCAAATTCAAGCTTCAAGCATAATCAATAACCCAAACAATTTTTGGTTTAAAAAAGGATCAAACGCTTTGAATATGAAGAAATTAAATATATAATGTGTTGAGTGGTGAGGTGAAGCACCATAAGTAGAATAAAGAAGCCATTTTACCCTCTCATTAAGTAGAATGAATGGAAGACATATTGGAGGTGAACCAACCTTAAGGTTACATCTGCAAATTAAAAAGGAAATATGAGGAAGCTTACGTCAGGCCCCGGACAAACGGAAATATGGAAATCTTTTCTTCTCTTTTTTAGGGTTTATAGACAATCTCTTGTAAAGATATGTGGTGTGGTGACTGATGGGTGGTGGTAACAGCAGGGGAAGTGTGGTGCCTCTGAGTTTTGATGGAGAAAGGAAAAATGCAAAATACCTCGAATCCAAAAACGAAGATCAAATAAGTTATAATAATTAAGTCTATAGCACATACAAATTTATTATTTGCAAAAATAGCAAAAAAGAAAAAAAATACTCAGTCCACATATATAAAATGTAAGATGTCACAAATGCCCTCATTACTAATATACATTTGATACACCTGATACATACTTAATACATATCTAATACACTTAATATTTTTTTATACACATAATTAATATCTTTTAATACATCTGATACTCCTTGATGCACTTGATATACATTTGACATTTCTTGAAAACCTTTGGATCTTGATACACTTGATGCACCATGATATTCTTTGATACAATCAATACCCTTTTATACACTTGAAACACCTTGATGCACCTAATACTCCTTATTACAATTGATTCTTCTTAATACACTTCATATACTCCGTTAAAAACTAAGCTCTCATATGTAATTCACAGATTTACAAAGGGGAGAAGAAAGAGTTGAAGGGTTGCAAAAATGCACCACCGATCACTTCGTTCACCGTCTCTTCCAAATCCCCAATCGCCACCACCACCGTTTTATTCACCTTCTCTTCCAAATTCCTAGTCACCATTGCTTCGTTCAGTTTGACAACTTCCAAACCAACGACGCCTCCATTTTCATTCATTCCCTCATCCTCTTTGCCCTAATTTCCCACTTCACCTTCGCCATTCAACTTCACATCTACATCTGATCATCGCAAAGTTGAACCTAAATTCTTCGTCTATTTCCAATTTTCAGGTACATTCACTATGTTTATTCTTTCGATTTCGCTTTCTGATTCTTTACATTCTGTTTCATTAGCTAATATTTTTTATTTCATTTTTGCGAGGTTTTACTAATTTCCTTCTTGACGAATAGGGTTGTTACATTGCAGATTTCAAGATCTTGTTGATTCTTTGGGTGAAATTTTGTTGATTCATACGCAATAAACTTAGTATTTTAATTTTTCTGGTTATGAATGTGCTACACTATAATTGCTTGCTTGCTTAATCATGGTTCATACATCTTCTGACGATTTTGTGCGTCAGGAGATCCTCATTTTCTTGTAGTGATAGTATTGAAATTTATGTCTTAAAACTGGTAGATAAAACATATAATTCATTAACCGTTATTAATTAATAAAGTGTTATTATTGTAACT

Coding sequence (CDS)

GCTTTGTCTTTCTCTCTATTCCTCCTGAGCTTGTACTTTATGTTTTTGCATTATTTACAAAGGGGAGAAGAAAGAGTTGAAGGGTTGCAAAAATGCACCACCGATCACTTCGTTCACCGTCTCTTCCAAATCCCCAATCGCCACCACCACCGTTTTATTCACCTTCTCTTCCAAATTCCTAGTCACCATTGCTTCGTTCAGTTTGACAACTTCCAAACCAACGACGCCTCCATTTTCATTCATTCCCTCATCCTCTTTGCCCTAATTTCCCACTTCACCTTCGCCATTCAACTTCACATCTACATCTGA

Protein sequence

ALSFSLFLLSLYFMFLHYLQRGEERVEGLQKCTTDHFVHRLFQIPNRHHHRFIHLLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI
Homology
[Close]
BLAST of Cucsat.G18117 vs. NCBI nr
Match: XP_038900916.1 (uncharacterized protein LOC120087962 [Benincasa hispida])

HSP 1 Score: 73.2 bits (178), Expect = 1.19e-14
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI 102
           LLFQ+P HH FVQF NFQT+ ASIFIHSLI FALIS FTF IQLHIYI
Sbjct: 21  LLFQVPGHHRFVQFGNFQTSGASIFIHSLIFFALISLFTFVIQLHIYI 68

[Close]
BLAST of Cucsat.G18117 vs. NCBI nr
Match: XP_008454011.1 (PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 1.68e-14
Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI 102
           LLFQIP HH F+QF NFQT+ +SIFIHSLI FALIS FTF IQLHIYI
Sbjct: 21  LLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTFVIQLHIYI 68

[Close]
BLAST of Cucsat.G18117 vs. NCBI nr
Match: XP_004152115.1 (uncharacterized protein LOC101215007 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 4.80e-14
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI 102
           LLFQIP H+ FVQF NFQT+ ASIFIHSLI FALIS FTF IQLHIYI
Sbjct: 21  LLFQIPGHNSFVQFGNFQTSGASIFIHSLIFFALISLFTFVIQLHIYI 68

[Close]
BLAST of Cucsat.G18117 vs. NCBI nr
Match: XP_022932694.1 (uncharacterized protein LOC111439163 [Cucurbita moschata] >XP_022972135.1 uncharacterized protein LOC111470767 [Cucurbita maxima] >XP_023539087.1 uncharacterized protein LOC111799839 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 69.3 bits (168), Expect = 3.91e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIY 101
           LLFQ+P HH F+QF NFQT+ ASIFIHSLI FALI  FTF +QLHIY
Sbjct: 21  LLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTFVLQLHIY 67

[Close]
BLAST of Cucsat.G18117 vs. NCBI nr
Match: XP_022145182.1 (uncharacterized protein LOC111014687 [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 3.17e-12
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI 102
           LLFQ+P HH FV+F NF T+ ASIFIHSLI FAL+  FTF +QLHIYI
Sbjct: 21  LLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI 68

[Close]
BLAST of Cucsat.G18117 vs. ExPASy TrEMBL
Match: A0A1S3BX44 (uncharacterized protein LOC103494560 OS=Cucumis melo OX=3656 GN=LOC103494560 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.15e-15
Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI 102
           LLFQIP HH F+QF NFQT+ +SIFIHSLI FALIS FTF IQLHIYI
Sbjct: 21  LLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTFVIQLHIYI 68

[Close]
BLAST of Cucsat.G18117 vs. ExPASy TrEMBL
Match: A0A6J1I7P7 (uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.89e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIY 101
           LLFQ+P HH F+QF NFQT+ ASIFIHSLI FALI  FTF +QLHIY
Sbjct: 21  LLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTFVLQLHIY 67

[Close]
BLAST of Cucsat.G18117 vs. ExPASy TrEMBL
Match: A0A6J1EXQ9 (uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC111439163 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.89e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIY 101
           LLFQ+P HH F+QF NFQT+ ASIFIHSLI FALI  FTF +QLHIY
Sbjct: 21  LLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTFVLQLHIY 67

[Close]
BLAST of Cucsat.G18117 vs. ExPASy TrEMBL
Match: A0A6J1CVS1 (uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014687 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.54e-12
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIYI 102
           LLFQ+P HH FV+F NF T+ ASIFIHSLI FAL+  FTF +QLHIYI
Sbjct: 21  LLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI 68

[Close]
BLAST of Cucsat.G18117 vs. ExPASy TrEMBL
Match: A0A6A1UN09 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004505 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.72e-08
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0 

Query: 55  LLFQIPSHHCFVQFDNFQTNDASIFIHSLILFALISHFTFAIQLHIY 101
           LLFQ+P HH +V+F NFQT+ ASI IHSL+ F LI  F  AI++H+Y
Sbjct: 21  LLFQVPGHHGYVEFGNFQTSGASILIHSLLYFGLICIFFLAIKVHLY 67

The following BLAST results are available for this feature:
BLAST of Cucsat.G18117 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G18117 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900916.11.19e-1481.25uncharacterized protein LOC120087962 [Benincasa hispida][more]
XP_008454011.11.68e-1479.17PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo][more]
XP_004152115.14.80e-1481.25uncharacterized protein LOC101215007 [Cucumis sativus][more]
XP_022932694.13.91e-1374.47uncharacterized protein LOC111439163 [Cucurbita moschata] >XP_022972135.1 unchar... [more]
XP_022145182.13.17e-1270.83uncharacterized protein LOC111014687 [Momordica charantia][more]
BLAST of Cucsat.G18117 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BX448.15e-1579.17uncharacterized protein LOC103494560 OS=Cucumis melo OX=3656 GN=LOC103494560 PE=... [more]
A0A6J1I7P71.89e-1374.47uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767... [more]
A0A6J1EXQ91.89e-1374.47uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC1114391... [more]
A0A6J1CVS11.54e-1270.83uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6A1UN092.72e-0859.57Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004505 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 55..101
e-value: 4.5E-12
score: 46.0
IPR021775Protein of unknown function DUF3339PANTHERPTHR33128OS05G0103400 PROTEINcoord: 55..101
NoneNo IPR availablePANTHERPTHR33128:SF73BNAA06G16390D PROTEINcoord: 55..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G18117.T3Cucsat.G18117.T3mRNA
Cucsat.G18117.T4Cucsat.G18117.T4mRNA
Cucsat.G18117.T6Cucsat.G18117.T6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane