Cucsat.G18078 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18078
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Autophagy-related protein 3
Location	ctg3345: 5047628 .. 5054037 (+)
RNA-Seq Expression	Cucsat.G18078
Synteny	Cucsat.G18078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCTAATCTATAGGGTTTTTAAATATATTTTAGAGGTAAGATTATGTTATATATATATCCCTAACAAAGACTACAATAACACAAAATTTTATTACTACTAATCAAAGACTATATTAAGTATAAGTTTATTACCACTAAGGGGATGCGCACCAAACGGTCCGTTAGATAGTATCGTTACATTAAAAACATTTAAAAGAAACTTTACGTTTCTCCGTTGAAGCCCAAATTTGGGTCATCTCCCCCATTGAAGCCCAATTTCGGTGGTCGATCAGAGTCAAGCTTCTGCTGGGGATTTCAATCTTCTCTTCCAATTTCCAATTTCTCAATTCTTCTCATCTCGATTTATCAATCCCACCCAGATTTGAGATCATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGTATTTTCTTCTCCATTTCCATCGTCTTGTTTTCTTTATTCGTTATAATTCTTGGATATTTTAATTTCGTATTATTCAACTGCTGAATTGAACGATTATCTTTATTATTAGATTCGGTATATCAATTTTCTTTTGTGAATCTTGTCATTTTTGTTAATTCTGTTTTCAAGATAGTGGATGGAGGTCGTTTATGGTTGTTCAAAGGACATTGTGGTCAGTTGGTCTGTGTCGAACTGAAAGCCTTCCAAATTTTCAATGTAGACGTTGTTGAAGGAATATAGTTAACTCCCTTTTAGTGGATGGTAGAGCTTTGGAGTGGTTGAGAAAAATCCTTAATGCCATTTCGGTCAGAAGTTCTTCAGAAACTTAAATGGAGAGTGGTTAAATAGTGATATCCCATTGGTTTTTCATATTCTTCTGAAACTATGTTTATAGCCTTCTTTGAGAAGCAAGTTGGTTATTCGTTTTCGAAGTATAAAATTTAGTGGAACGAAATTAGAGTAGAAATCATAGTTTGTGTTTTCCAACTTACTTTTAGGCTCTTCGTGGTTGGACGGACAGTCGTAAGTCATAACGCATATGTTGGTTACTTCCCATCCTATTTCTTTTTCAGGCAAAGGACAATGTGGGTCTTTCCACAATCCCATGAAAACTGACGTTATTAGTGGCTCACTTGTTCAGTTATACTTTTTATGTTCTCACCTCCTCTATTCGTTTAACTCCTTAAGTTCTGGAAGTGTTTTAAAATTTGTCTATTATGTGTTAAAATATCTTTTCCTTGTTCATGATTTTAGGGAGTCGGGTGATCTGAACAAGAGGAAATCATATCTGCCCCCAGATAAGCAATTCTTGATTACCAGAAATGGTATAACAGCACAACCCTTAACTTCATTGTTTTGTATCTCTAAGCATTATTCTCGTTTCATTGCCTTAATGAAAAGTCTCGTATCCTTTTCAAAAAAAAATTCAATAAGAATTAAATGAATTTTTGCGTAATAATCTTCAAACTTGAGCTTTGTTGAGCCATTATAACAATTAAGGTAATAGTTCACTTTCTTTCCAGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGGTACCTTTATCTATGAGTTTGAAGCTAGGGATTTACATTAGGTAAATAACATGTGCTCTTTCATGCAGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGTATGTAAATTAAATTTTATGAGCAAATTGTGGCTTAAGAATATTCCTTTTACTAAAGGGCCTGCATAATCACTGCCCACCCTCATCCGCCCCAAAATTAACAGGAGTTTCAGCTATATCTATGTTTTGCAAGTTTGAGCTTTAATCCATGCTCTCTTAATTTGCTAGGCATAGAATGTGGAGAATAATCTGGATTTTTTCTGTGGTATCTGATCTTGAAAAAACTTTCTTGGTTTCCACAGAGAAAGCTTTTGGTTCTTTTTTTCTTTTATCATATACACTAACAACCATTTGGAATTAGAAAAATATTTATCCTCACATCCTGCGGCAGTTATTTTTTGATGAGAGATTCATGTTCGCATTTACTACTTCATTGTAGGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTAAGGAGATTTCTCTTGTTGTTCTTTTCGCTGTTTTTTTACTTATGAAGAATCGTATGTAATGTGTTGAATAAAAATGGATCGAAATTCATGAGTTAGGAGGAAAGAATCCTTCTATTTAGCAAACAAAAACTAGATGCAATTGAATAAATATCACTTGTAATGCAATTCGAGATATCCCACAAAAATTTTCCCTTCTATGAAATCCTCCACTTTTTTGACTCCAAATCTCCAAGTACTGCAAAGAATGGATTTAGGGGTAGAGTCATAAAATATTTGCATCAGATACCCCAAATGCAGGTTACTTTCTAGTTGTTTTTCATAGTTTTTCAGGAGAAAAGATAGTTATCATTAGGAACTTTTGGTAATTATTATTAGGTTCATTATTTTGAGCATTGGTGCAATACTTGGAGAATGAAGCCCTTGCCATTTTTCTTGAGTAGAAAATGAGGAAGTGTGGATTTATGGTTTAGAATTGAACTGCAGCCTATTCCATTGTTTTTTGTTCTTCCTTATCAATTTTGTGGTTATCTTATAACTGGTCATTAGTTACAACTTTTAAGGGTTTAGGCATATAGGTAAATGTTTCTGGTTTTAAACATTGTGGTCGTGAATTAAATCTTCAAAATTCACTACCACATTGGTACAACTGGTAGTGGTAGTGATCTTGGCTACAACCAGTGTTCCTGACTCTTAAGTCCTTTTGGTGAATCTCATTTAAAACCTACTTGATCTCAAGGACTCTGGGAAATATTGTTATTAATGAAGTTTTAGCTTTCCATGAGACATTTTCCTGTTGATTATTGTAGGTCAATTAAGTTTTATCAATGGTATATGTACATGAAATAACTATTAAACAAGGGAATATCCAGAGAAAAAGAATATACGAAAAATATCTTTGCAATAGTTAATCCTATGATACACCATGTATCTTTGTGAGGAAATTGTATCATGTCATGTTTGACCTAAAATAAGGAAGTTTGTTTATGTTCTATAATAATGCTTTTCCAGATTTCAAAAGTAGATAGTTGACTACAAGTTTGACAATGATGCTATTCTTTTCTAATATCAGGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGGTTTGTATGTTTATGTGTATATGTATTTAAATGTGATTAACTGATAACAAAATGTTAATTATAATATTTTAATTTTCACACTACACATCTTGTTAGTGGGTTGTATAGGTAGAATATTGTGTGATATTATAACTTTGAAAAAGATCTAGACAACGAATGCAATGGAGTGAAATTGATTTTTTAGTTCTTCATTGGTGAATGGTAATTGGTGTGAATATAAAGAGGATTCAACGAGTGGCAGTTGTTTATCATCACTTTTCTATGTACTTCTCTGTAATGTATTTGTCTTTCTAGTTCAAATGCATATTGCCCATTGAAATTTCTTCTTATTTCTTGATTAGTTATCCCTCAATAGTTCATGGTTTATGTTTGATTACTGCTTAATAATGCTGTTTCATAAATTATCTTTTCTTTTCAAAGCTACAGAAAATACGGCACTAACTCTGCATGCTCACACTGACACCAACACTGCTTTCTATTGTGATAAAAGTTTTTTTTTCCACAATAGAATACAAATTTTTTACATGGACAACAATTTGTTATCTGATGCTTTAATTTGCAAGTTCTTTTAATGCTTTCTTACCCAATTTCTTTTAGCACATACATATTTGAATCATTGTGAACTATGACAGTCAAGGATGCTCTTACAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTAAGTTGTGAATATGTAATAATGTAGTTCTGCCATCTATATGAGGCCCAATTATTTGTTCTATATTATTTTCAGTTGATCTGTATGCTTAGGATTGACTTCTTCTTGTACCTTTTGCTATGCCACACTACTCAAAGAAAAGAGGAAAAAGAATATTAATAATCGAGAATTAGCTCTTACATCTAAATTCGAGACTTTATAAAATTTGAGAACTTGAACACAACAAATACACAAAGAAGAAAGAAAGAAAGAAGTAAAAACTTCTTAGTTAGCTAGTAACCTTTGCCTTTGCCTCCTTTATTCTGCAGCAGCTAAAAATCCAGATTTACAATGACAGTAATATCATATCCAGAAATGAAGGCTTGGCAATGAAAACATAATATTTTGATTAAACTTCTCAGGTGGAGCGAGACTTTGAAAGAATATTGACACCCAATGCACAACCTGGAACCAAAATATGGTTGGGTTCAGTTATGTCCATCAACTGAATTGTTGTTCTAAGTTCAAGTTCTCAGATAGTATGGATTATGGACTTCGATCCTTGTGGATGCGACAATACATAATTTTACACCTAGATAAGAGGCCCTATTTGGATTGACTTAAGAAAAAGATTGTCTAAAATACACTTCAAAAACTATTTTGAGTGGAAGGTGACTTATTTTTTAAATTAAAGACCTGAATGTATTCCAAACAAAACCAAGATTACCAACAAGAATCTGTTTTTGCTTTTGTATGCTGAACCAGTATGGGGGAGTCTGGAGAACCCATACATTTGTTTCATTGTCTACGAATGTCCTTACCAGTGTCATGTGGAACATGAATTTCCAAATACATTCTAAATTCAATATTTGGGATACAGGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTAATTATTTCAGTCTCTATTTAAAACAACAGATCTCCCTACAAGTTTGCACTTCTTGACAAATATAATCTGTTTTGTTATTCTAAGTGATTATTCTATTCTTGGTAATGAAGAACCTGTTATTCTTTAACTCTTGGGTTCAAGAGTTCCTATATCACTCCAAGCGACACAACAAAAACTTTTTTCTATTCTTTTATTAACTTATTTATGTATAGGATTCCATTCACTCTATGGTTGGGAACTAATGATTGATTCTGTCTACAAAGATTCTGGATTTACTCATTATCCTTGTTCCTAAGTATCTCAATCTCCTCTACTTGTTAATATTTTTCCTTGTATTTTTTGTAGGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCGACTATTGAATATGATTATACTATGGACTTCGATCTCGGCGGCCCTAGCAGTCAATAACTGGTATTGATAAGCATTGTGAGAACAGCTGATCTTAGTTCCTTTTCAGCTTCCATCATCTTAAATTCATGCTTGTGTATATCAAAATTGCTGCTTATTATTACTTTTTAGCATTTATTTATTGGAGAAATTGCATGCATTGATAGATTCTGTACAGATTATTTAGGTTTCTTTTCTTAGGAATAGTAGTTGCGTACAATGTTCTTAGACTACACTCAGTACCTTTTAAATAATATTTTCATCCTCATCATCATTGTAAAAATAGTTGTAACTGTAATGTTGTTGATCTTCCAGCTGCTTTCATGTGTTGAAATAAGTCTATTTCTTTAGAAAATTCATGTACTTTTCAATCATTCATATATTTACTTCAAACTTTTTCTTCAGCTTAGATGAAGTTTAGTCGTTTTGAAAATTTCTGAAAGCCAGAGATCATGAAGTGTCAATTCTCTCTTTGTTTAATCATTCATCGCGTTACTGCCAGTAGGAACACTTGTAAGTTTGATTGATCCATGACTATATAGCCCACCTTGTAATGGGCAGGCATTTCTTTATTGCCTTTGCTGTTCGTTGCTTGAATCCAGCCTGACTGTTTGAATATATTTGATGCAGATCCGGTTATACATACGTGTGGGACATTTCACATCTGATGTTTCTGCAAATACAGGCTGACCCCTCGCTCTTTGTACATACACAACATGGGGTCTAAAAGTTACCCTCTTTTGGGCATATTTTGTGTTTTGGAAGTCTAATCTTGCCATTGCTTTCTGTCAAATCTTAGTTTGGGCATAAAGATCATTTGTGGTTCTTTGTAACATAACATGGAGCAGAAAGTTTCTGCTCTTCACAACTTACTATTCAATGGGAATTTGTTTGCTATTAAACTAGTGCAGCAAAAACTCATTTTCATCTTGTTGGGAAAAAAAAAATTGATTGAATGCCATTATTGCAATATAATACCTACCTATTAACAATCTCTCTTCAGGTTATGGATTTCTATTTGGCTAGTTTGCAAAT

Coding sequence (CDS)

ATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGGAGTCGGGTGATCTGAACAAGAGGAAATCATATCTGCCCCCAGATAAGCAATTCTTGATTACCAGAAATGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGTCAAGGATGCTCTTACAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCGACTATTGAATATGATTATACTATGGACTTCGATCTCGGCGGCCCTAGCAGTCAATAA

Protein sequence

MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYDYTMDFDLGGPSSQ

Homology

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BLAST of Cucsat.G18078 vs. ExPASy Swiss-Prot
Match: Q0WWQ1 (Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEFV+AGDNLVSKCPTWSWESGD +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 165
           KRK YLP DKQFLITRNVPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK
Sbjct: 61  KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPK 116

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BLAST of Cucsat.G18078 vs. ExPASy Swiss-Prot
Match: Q550A8 (Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 53  QKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKS 112
           Q +H+A+  TVE++T   + S F E+GVL+  EFV AGD L  KC TW+WESGD ++  S
Sbjct: 7   QAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSRNVS 66

Query: 113 YLPPDKQFLITRNVPCLRRAASVEEEYEAA-GGEVLLDNEDGDGWLA 159
           YLP +KQFL+TRNVPC  R  ++E E +A+   E+ ++++  D W+A
Sbjct: 67  YLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVA 113

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BLAST of Cucsat.G18078 vs. ExPASy Swiss-Prot
Match: Q6PFS7 (Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio OX=7955 GN=atg3 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-20
Identity = 50/100 (50.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 61  GTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQF 120
           G  E +T     S FKE GV++  EFV AGD+LV  CPTW W SG+  K K YLP DKQF
Sbjct: 14  GVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPNDKQF 73

Query: 121 LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLAT 160
           L+TRNVPC +R   +E   E    E +++ +DGD GW+ T
Sbjct: 74  LLTRNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDT 110

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BLAST of Cucsat.G18078 vs. ExPASy Swiss-Prot
Match: Q9CPX6 (Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.5e-20
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 64  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQFLIT 123
           E +T     S FKE GV++  EFV AGD+LV  CPTW W +G+  K K+YLP DKQFL+T
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVT 76

Query: 124 RNVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATH 161
           +NVPC +R   +E   E    E +++ +DGD GW+ T+
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTY 111

[Close]

BLAST of Cucsat.G18078 vs. ExPASy Swiss-Prot
Match: Q6GQE7 (Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus laevis OX=8355 GN=atg3 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 64  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQFLIT 123
           E +T     S FKE GV++  EF+ AGD+LV  CPTW W +G+ +K K YLP DKQFL+T
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMT 76

Query: 124 RNVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLAT 160
           +NVPC +R   +E   E    E +++ +DGD GW+ T
Sbjct: 77  KNVPCYKRCKQMEYSDEQ---EAIIEEDDGDGGWVDT 110

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BLAST of Cucsat.G18078 vs. NCBI nr
Match: TYK24715.1 (autophagy-related protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 1.27e-76
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. NCBI nr
Match: XP_004140511.1 (autophagy-related protein 3 [Cucumis sativus] >XP_011656844.1 autophagy-related protein 3 [Cucumis sativus] >KGN46507.1 hypothetical protein Csa_005198 [Cucumis sativus])

HSP 1 Score: 241 bits (615), Expect = 1.71e-76
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. NCBI nr
Match: XP_038876160.1 (autophagy-related protein 3-like [Benincasa hispida] >XP_038876161.1 autophagy-related protein 3-like [Benincasa hispida])

HSP 1 Score: 241 bits (614), Expect = 2.36e-76
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. NCBI nr
Match: XP_008459789.1 (PREDICTED: autophagy-related protein 3 [Cucumis melo] >XP_008459790.1 PREDICTED: autophagy-related protein 3 [Cucumis melo] >KAA0039782.1 autophagy-related protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 3.44e-76
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. NCBI nr
Match: DAD47724.1 (TPA_asm: hypothetical protein HUJ06_017661 [Nelumbo nucifera])

HSP 1 Score: 233 bits (594), Expect = 4.83e-76
Identity = 109/120 (90.83%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQK+HEAFKGTVERITGPRTVSAFKEKGVLSVSEF++AGDNLVSKCPTWSWESG+ +
Sbjct: 1   MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKGTFI 168
           KRKSYLPPDKQ+LITRNVPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKG  +
Sbjct: 61  KRKSYLPPDKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKGMLL 120

[Close]

BLAST of Cucsat.G18078 vs. ExPASy TrEMBL
Match: A0A5D3DM68 (Autophagy-related protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002730 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 6.17e-77
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. ExPASy TrEMBL
Match: A0A0A0KDT1 (Autophagy_act_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G104635 PE=4 SV=1)

HSP 1 Score: 241 bits (615), Expect = 8.30e-77
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. ExPASy TrEMBL
Match: A0A1S3CAI3 (autophagy-related protein 3 OS=Cucumis melo OX=3656 GN=LOC103498815 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.67e-76
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

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BLAST of Cucsat.G18078 vs. ExPASy TrEMBL
Match: A0A5A7T8K5 (Autophagy-related protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00500 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.67e-76
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

[Close]

BLAST of Cucsat.G18078 vs. ExPASy TrEMBL
Match: A0A6J1IFS6 (autophagy-related protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472923 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 9.53e-76
Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 49  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 108
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGD+N
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDIN 60

Query: 109 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 164
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPK 116

The following BLAST results are available for this feature:

BLAST of Cucsat.G18078 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWQ1	1.6e-57	90.52	Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2	[more]
Q550A8	1.1e-23	47.66	Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV...	[more]
Q6PFS7	1.5e-20	50.00	Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio OX=7955 GN=atg3 PE=2 SV=1	[more]
Q9CPX6	7.5e-20	47.96	Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=...	[more]
Q6GQE7	2.9e-19	47.42	Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus laevis OX=8355 GN=atg3 PE=2 SV...	[more]

BLAST of Cucsat.G18078 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24715.1	1.27e-76	98.28	autophagy-related protein 3 [Cucumis melo var. makuwa]	[more]
XP_004140511.1	1.71e-76	100.00	autophagy-related protein 3 [Cucumis sativus] >XP_011656844.1 autophagy-related ...	[more]
XP_038876160.1	2.36e-76	99.14	autophagy-related protein 3-like [Benincasa hispida] >XP_038876161.1 autophagy-r...	[more]
XP_008459789.1	3.44e-76	98.28	PREDICTED: autophagy-related protein 3 [Cucumis melo] >XP_008459790.1 PREDICTED:...	[more]
DAD47724.1	4.83e-76	90.83	TPA_asm: hypothetical protein HUJ06_017661 [Nelumbo nucifera]	[more]

BLAST of Cucsat.G18078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DM68	6.17e-77	98.28	Autophagy-related protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0KDT1	8.30e-77	100.00	Autophagy_act_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G10...	[more]
A0A1S3CAI3	1.67e-76	98.28	autophagy-related protein 3 OS=Cucumis melo OX=3656 GN=LOC103498815 PE=4 SV=1	[more]
A0A5A7T8K5	1.67e-76	98.28	Autophagy-related protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A6J1IFS6	9.53e-76	97.41	autophagy-related protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472923 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007135	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PFAM	PF03987	Autophagy_act_C	coord: 71..126 e-value: 1.3E-14 score: 54.7
IPR007135	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PANTHER	PTHR12866	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 35..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18078.T7	Cucsat.G18078.T7	mRNA
Cucsat.G18078.T1	Cucsat.G18078.T1	mRNA
Cucsat.G18078.T5	Cucsat.G18078.T5	mRNA
Cucsat.G18078.T18	Cucsat.G18078.T18	mRNA
Cucsat.G18078.T19	Cucsat.G18078.T19	mRNA
Cucsat.G18078.T14	Cucsat.G18078.T14	mRNA
Cucsat.G18078.T15	Cucsat.G18078.T15	mRNA
Cucsat.G18078.T16	Cucsat.G18078.T16	mRNA
Cucsat.G18078.T17	Cucsat.G18078.T17	mRNA
Cucsat.G18078.T10	Cucsat.G18078.T10	mRNA
Cucsat.G18078.T11	Cucsat.G18078.T11	mRNA
Cucsat.G18078.T12	Cucsat.G18078.T12	mRNA
Cucsat.G18078.T13	Cucsat.G18078.T13	mRNA
Cucsat.G18078.T8	Cucsat.G18078.T8	mRNA
Cucsat.G18078.T9	Cucsat.G18078.T9	mRNA
Cucsat.G18078.T2	Cucsat.G18078.T2	mRNA
Cucsat.G18078.T3	Cucsat.G18078.T3	mRNA
Cucsat.G18078.T6	Cucsat.G18078.T6	mRNA
Cucsat.G18078.T4	Cucsat.G18078.T4	mRNA
Cucsat.G18078.T21	Cucsat.G18078.T21	mRNA
Cucsat.G18078.T20	Cucsat.G18078.T20	mRNA
Cucsat.G18078.T23	Cucsat.G18078.T23	mRNA
Cucsat.G18078.T32	Cucsat.G18078.T32	mRNA
Cucsat.G18078.T33	Cucsat.G18078.T33	mRNA
Cucsat.G18078.T34	Cucsat.G18078.T34	mRNA
Cucsat.G18078.T26	Cucsat.G18078.T26	mRNA
Cucsat.G18078.T29	Cucsat.G18078.T29	mRNA
Cucsat.G18078.T22	Cucsat.G18078.T22	mRNA
Cucsat.G18078.T28	Cucsat.G18078.T28	mRNA
Cucsat.G18078.T30	Cucsat.G18078.T30	mRNA
Cucsat.G18078.T24	Cucsat.G18078.T24	mRNA
Cucsat.G18078.T27	Cucsat.G18078.T27	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0000422	autophagy of mitochondrion
biological_process	GO:0044804	autophagy of nucleus
cellular_component	GO:0000153	cytoplasmic ubiquitin ligase complex
cellular_component	GO:0005829	cytosol
molecular_function	GO:0019776	Atg8 ligase activity
molecular_function	GO:0019787	ubiquitin-like protein transferase activity