Cucsat.G18076 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18076
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ELMO domain-containing protein
Location	ctg3345: 5020810 .. 5027710 (+)
RNA-Seq Expression	Cucsat.G18076
Synteny	Cucsat.G18076

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGCCTTTACATTTCTATAATCTTGGAGAGTTTCCTTCCCATTTTAAAATAATATTCTTCCCCAAAACCCAAAAACCAAAAACCAAAAAACCAAAAGAAAAACGCTTCTTAGTCTTTCAGTTCCACCAAAACAAAAACGCTTTTTCCAAAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGATAATACATTACAATTGCAAATCCATACACATTCTCAAATAACCAACAACTTCCATGGACTCTCACTCTCAGATCTTGCTCCAACCCTAGCTGCTTTTCCAGGTCCCAATCAATTCCTTCTACTTTCATTCTTCTTGATTCATCTCTCTCTCTCTCTTTTTATTTTTTTGTCGTTTTTCTTTCCTCACTTTGATAATATCATCTTTCTTCCATTCTCGCCGCCGTTTTACTTGCTTTGATTCTATCGTTTGTTGTTTCTGATTGCCTTAATTGAGTTCTGTTGATTTACTGTTTTCGGATTCCTTTTTGTTGTTTTTTTTGTTCTACATTTCATCTCTGCTTTTATGTGTTTACTGATTTTGGATTTAGCTTTGTCTAATGCTGCAATTCTTATCGCTTTTTGTGTTTCTGGATTGTGGTGGATAATTTTCAGGTTAAGGAGGGGGAACTTGCTGTGTAGCGTTGCTGGTGAGGGATATGGCGGATTAACGTAGAGAACGGTGAGGAGAGGAGAGGTGAAGGGAGATGGATGATAGAGGTGGTGGATCGTTTGTTGCTGTGAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGCCATTCAACTTCAGGTGAGTATTATCTTTAATTTCCATCCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTACTTTTACTTTAGATTAAAATTAGAGTTTTCGTCCTTGCTTTTCTTTCGCTGAAAAGTTTTCTCTATCTCTCTCTTTCTCTCGCTCTTTTGTTTCCGTTTCTTCATCTTAATTCTTGATTTATGATTTACTTTTTGGTTTAGAAATTTAGATCTGTTGAGTAATGTGCGCTAAGCTCTGCTTATGCTGAGGCTCTCACTGCCTTCATGCTTGCTGAGATTCAAATCTGTTTTGGTGGGTCTACTCAGTGGGATTTTCTATTTCTATTTCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTCTATCTCAACTCTTCCTTCATCCATGTTGAATTTGTGATCAAGTACCGGACGTTTGTGATTCTGATTTTTAAGTTGGTTACGGATTTTATTTTCTTTCTATATATATTTTTTAAAATTTATTAAATTGTACGTTGTCCACTGAAACTTGTGGAAGTTATAGATCTTTCCGGCAGAAATCATGAAACTCATTAATTAACCACGTTTGATTCTGATTATATTATTATTCTCTCCTTATGTACGGTTGATTGTCGGATGAACGTGATGGCAGGACTCAAGCTTGCCTTAGTTGCTTGACATAACTCAAACACCTTTTGTGGTGTGTGTATTTTTTCTTCGTGGATAGCGTTATCTCTACTGCATGTTCTAATTATTAGTTTGCAATTTAGCAAATATACTATTCATTCTAATTTTTTTTTACTGTGCCATTAATTATTACCCCTTTTTTGAAAAAAAAATTGCTGGTGGGAGAAGTATCCTGCAATTACAATTACTGGTTTCGAGTGAGTTAAGACCTCTTCCCATTTTTACTCAATATTTACCCCCGTTTTTTTACTTGATTGATCAGTGATCTAAAGAGAGGTTATTCCCAAGTGAAGTAATTATAATGTTAAAATCATGAGTAAGAGATATGAAGTGTGAGGATCGAATCTCCTTTGTAATGCATTTAATGTGTGTCATGTTATTTATCTGTAAATTGTTTCACAAACTCGTGTTCTTTCATGTTACAGCTTCTTCCATGATTCCGCTTCATCTAGTGTTAATAGAACAATATTCTCCACTTTCTTTTGTTTCTATTTGCAATTTTGCTTTGCTGTACTAGTGATATTTCCTTACCGTTATCTATAATCTCTGTGATTTTTTAGGACCCCTGTAGGCAGTTGCTAGAAACTTGTACTGGATGCCCTCTCATGAATTATGACTTTCCATGGGACTTCTAAATATTTTTACGATATATTCAAACTCAGGAAACCATGAATAAGTTGGATAGCAACTTGCTACGAAATTAAGTTTAATAGCATATACATGAACTCTTGCGTGTGTATTCTTACCATATACATTTAAATAGCTGTCTACAGGATTAGGGGACATCGAAATTGATTGACTGAAACTTCAGTTTTCATTGCTAATGTGCTTTTGTGTTATTTCAGCTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGTGTTTGTGCACAGAGAAGAGAAAGTGATGCACGCCCATCATTTGACCTAACCCCTGCACAGGTAACCTTATGAATTGGTGATTGTTAACTTCCGTTTTGCTGAATGGAAAGGAGCCTTATTTTAACTATTATGTTGATTTGAAGTGTTTGGAGGCTTGAGAGGTAGTGGTTTATTCTGCTGTTTACCTTTTCAAAGCTCATACCCCTTAGATGGACACTGGAAGGAACTGTGTAGCAATGTGTGCTGTTGAAAGGAACGAAAAGGAATCCGTTTTTTGGGCATCCTTGTTTTAGAAAAAAAATTCAAACATATGCTCATATTTGTCATCCGTTCTTAAGAATTCAAATGACGTTTTTTAATGTGCTTATTCTTTGTGCTGCTGCATATTCTTTTATGAGTTGTTTGTGAAGTAACAAGAGGGTCTCAGTGTCTCACAAAACTGTGTATAGGGTACGGTACCCTAATGTGCTATTCTTTCTAGGGATGGAGGTCTGACTATATTCTTTAGAGCATGTGGGCATATTCATATTTGAATTGAATTTGAAGTTTTAGTTTAACTTTAGATACGGAATGATGAGGTTGGTTGGCTTTCTTACCCCTGACCATTAGGTTGTTTCTTCTTTCTTTTCCAATGCTTTTTTCCATACTCTTGAACATTATGGTCATTGAGTAGTTTCTTCCATATCACACTTGTTTTCTTTTTGGGGCTTGATTGAACTTGTAGGAATCTTTCATTGTTTGGTTTTGTGGTAGTTTTCTTTTTCTGATTTTTCATTCCATCCATTTTTCTTTCAATTTTGTGTATATTTACCACATTTTAGTGCATTTGTACCGAACATGTTAATCTTTCCACAAAAGAAACATGCAGGGAGTTTTCTTATATGAAAGTAGATTTATTACCAGAACTGAAATGTGCACGATGATGATCACGTGTTGCACTTGGCCTAATTTTATCTATTCTTTTTGTGATGTGTGTGCATAAGGAAACAAGTTCTAGTTACCTTCTTAGAGTTCTTTTGAATTGACTTCTTCTCTATTGGTTAAGTTATCAATGTTAGAATCTTAACAAACAAAAAGGGCATTGAATGATGCCTCTGTTTGAAAGTTCAATCTTCAACTTCAATCTTAGGCTTTGCTTATCGCTAATATTGGTTTTTGCCACATTAAACATCTTATCCACCATGTGTATGCCTATAGTGAAGTTTTTAATAGTTTCATTTTTCTTAAATAGAAGAGTTTTGTGATCAACTAATTAATTTCAATGTCCTCATTTTTTATTCTTTGTTGAGCTTGCATTCCACTCTTTCTTATAGATATTAGGGAAAAAATTTGGATGGTGACTCGGTGAGAGGGAGATATGGATACTAGAAGTGGAGAATGACAAGTGGCTTAAATAGTGAGAGGGATTTGGTTGGGATAGTGGAGATGAGTGGAAAAGGAGATGAGCATGAGGCCTAAAGGTTGGCTTCAACTGAAACAAGGAAAAATAAAATCTTATCACATTTTAATGCTAAGTTGTAGGATTGGGTAACTGATGAATATTTAAATGCAAAATAGTATGGACTGAGCCAACCCTTAATTTTCTCATTTGTGAATTGAGACGGAACAACCCCAAAATTTTAACCAACCCAACAGTTTGGATTGAGTTTTCAGTTTTATTGGTTAGTTCAACACCGCTATTTAGTGACAAATTATACAAGCCACGATGTTGCATACCCCTAGAACCACTAGATATAAATCAAAGTGCTTCTCTCTCATAAATCAGCGTTGAGAAACTATCAGCCACAATGTGGTGAACTCATCAAAGACTTTTTCCTATTTAGCACTCTTAGCTCCAAGTCGAAGAAACTATTTCTTTTTAAAAAATAAAACACTGTTTTATGCTCGAATTAACATCTCATTATAACAGCCCATTTTGGTTCTTTTACTAGGAGGAATGCTTGCTGAGACTGCAGAACCGCATAGATATTGCCTATGATAGTTCAATCACTGAGCACCAGGTTTGTTTTCTGCACAACATTTTTGTCCTATATTATGTAAAATCTTGAGATTCTGTGTCTGGTGAAGTTGAGAACCTGAGACTATTTGTGTTTAGTTTTTCTCCTTTATGACTTAAGAGATTTGGATTCCTGATAGGAGGCTCTAAGGACTCTATGGAACGTGGCCTTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGTAATTAAGATTTACGTTGTTGCTTCATACTTTACATGAATTGCTCTTATATTGCCGTATTGAAGTTATTCCTGCGTTATTTTTCTTTCTTGTGCTTTACTCTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTGTTGTTCTTTGCCAAAAATTTCCCGGTATGCAACTTTTTCTCACCTTGCTTTTAGCCCCCTGGAGTCTTGATTTATTTTCCTTTTGGAAAAAAGAAAAAAAAGTTGAACTTACTGATTAGGAACCTTTAGCTTGGAAAATGCATACATGCTTCCAGTGATTGTCTTTTAACCCTAAAGTTTCTGGATATTCATTACAGAAGTCATTCCAGGATCTCCTTCGAAAGCAGGAAGGAGATCGGTCTCTATGGGAATACCCATTTGCCGTAGCTGGGGTGAACATTACATTCATGCTTATTCAAATGCTTGACCTTGAAGCAGGTTTGCGGTCTCTATGAATCAAAATTATTCAACAAAAATTTAATGCACAATTCCCACATATTCAACAACTGCCCAATTTTGTTGCAATTTAGAATGTACCAAATTTCATTCCTTGTTTGTATGTTTTCACATATGATTTTTTGGGTGTGGGGAAGGCAAATGCATGACTTACAGTATTACATGATATTTCTGACGTGGTTGACAATTGTTTTGTATTTGCATTTTCCGAATTTACTTGCTCTCATTCCACTCTGAAAATCACTTCCTGAACTTGCTTCGTGGATGATTCGATGTGATTCGAGGATCTAACTGTAGACACTCTCTAAGTCATCATTTTAGAAATTAGCGTTTTCTTATATCTAAATCTAGGGTTGATATTATTCTAGCTTACGGAAATGTGACAACTTTTATTCACTAATGGGATGAAATGATATTTCCAGTCAAGCCACGGACTCTTGTGGGAGCAACTTTCTTGAAGTTTCTTGCAGGTAATGTGGAACTAATTTGTTGAATATTTGTACCAATAGCATTTCAAAGCCATATATACCAATTGAAATTCTTTTCTGCTCGTAATTTCTTCATCACTAATATATGTAGTTATTGATTATGCAAAATCTTCTTATTAGATGACTTTATGATATATGGATGATTATACATGCAAATCTCTTTCTTAAATTTACTAATCCAGGTATTTCCTTTTTCCTGACAGAAAACGATTCGGCATTCGACCTACTCTATTGTATCACGTTCAAACTAATGGATCATGAATGGCTTGCCATGCATGCATCATATATGGACTTTAATGTATGTTGTCCCGAACCTTGAAATTGTCAAATTTATTGTCTTAATACTGTTCGATACATTCACTCGTTTTCTGTTTTTTATGTATTACATTCTATCAATATCCCCCTCAAACTTTAGGTTAAGACTTGAAACATTCAACTTCTGCTGCTACTCATACAATTGTTGGAAATTGTTGATCCTTATAACCTTCCTTAGGAGTGAATTCACATCCATGGCATGGATTGCATTTGCTATCCCAAGGATTCACCCGGATAAGCATAGAATTAGATGTTTAAAATTGAGCATACCTTAAATGGTCAAGTCATTATATACTACTTTGAAGTTATATATTCAAATTTCCACCCTTACGACAATATAATGGCCCGTGCTTCCTTTTTTGTTGCCTCTTTACAGACGGTAATGAAAGCAACACGACGACAGCTGGAAAAAGAGCTTCTAATTGAGGACATTTCAAGACTAGAAGAACTGCCCTCATACGGCCTTCTCAATCGATGATAAATTCGTTTACGATCAAACCTCTCATTTTCTAATGGAAACAGCTCGTGAGAAAGAGAAAGCAAGTTACGGTATCGTCGCCCTTCCATAGCCCCTTTTAACTAGTTAGTGTTTTCTTTTTCTTTCTTTGTACATGATTATTCTGATCTTCCACATTTTCATTTTCCAAGTGGCTTTCTCTTTTGCTCTCCTATGGCTAAGTAGTGTATCCACATCATCATCCATTCCCCACTTCAATTCTTCAAAGAGAAAAGCCCTTTCCCTTCGTTCCTTCCACTTTTTTCTTCTTCTTTATTGTGGGTTTCTTTTTCTTTTTCTTCTTCTTCCACTTTTTTTTTTCTTGGAATTTGAGGTTGAGACTTGTTTGCAATTAAGTTTGATGGATGAGCTTTTAATTTCTTGCTCTGCATACAAGACTTCCTCTCATGACTTGTGAATGTGAAAGATTATAATGATTTTTTTGTTTTGTTTTGTTTTTTTTTATCTAAACTATGAGATATGAGATTTAATGCATGAGAAAAATGTACCATTCTTCGATT

Coding sequence (CDS)

ATGGATGATAGAGGTGGTGGATCGTTTGTTGCTGTGAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGCCATTCAACTTCAGCTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGTGTTTGTGCACAGAGAAGAGAAAGTGATGCACGCCCATCATTTGACCTAACCCCTGCACAGGAGGAATGCTTGCTGAGACTGCAGAACCGCATAGATATTGCCTATGATAGTTCAATCACTGAGCACCAGGAGGCTCTAAGGACTCTATGGAACGTGGCCTTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTGTTGTTCTTTGCCAAAAATTTCCCGAAGTCATTCCAGGATCTCCTTCGAAAGCAGGAAGGAGATCGGTCTCTATGGGAATACCCATTTGCCGTAGCTGGGGTGAACATTACATTCATGCTTATTCAAATGCTTGACCTTGAAGCAGGTTTGCGGTCTCTATGA

Protein sequence

MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQMLDLEAGLRSL

Homology

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BLAST of Cucsat.G18076 vs. ExPASy Swiss-Prot
Match: Q54YW1 (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.2e-20
Identity = 44/106 (41.51%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 73  LQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGF 132
           + NR ++ ++   +EH   L  LW++ +P  +L   +SEQWK+MG+QG DP TDFR  G 
Sbjct: 369 ITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAMGI 428

Query: 133 ISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFML 179
             L+NL++FA+N+ + F+ ++  Q  DR   EYP A AG+ +TF L
Sbjct: 429 WGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFEL 473

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BLAST of Cucsat.G18076 vs. ExPASy Swiss-Prot
Match: Q8IZ81 (ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 81  YDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLF 140
           YDS   +H+E L  LWN+  P ++L   IS+QW E+G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 141 FAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQMLDLEA 187
           F++N+      +L +    +    Y +A+ G+N+T M   +L  EA
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEA 223

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BLAST of Cucsat.G18076 vs. ExPASy Swiss-Prot
Match: Q08DZ3 (ELMO domain-containing protein 2 OS=Bos taurus OX=9913 GN=ELMOD2 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-18
Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 46  CVCAQRRESDARPSFDLT--PAQEECLLRL----QNRIDI------AYDSSITEHQEALR 105
           CV    +E +  P  D +     + CLL++    Q  +D+       YDS   +H++ L 
Sbjct: 73  CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132

Query: 106 TLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLL 165
            LWN+  P ++L+  IS+QW ++G+QG DP TDFRG G + L NL++F++N+      +L
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192

Query: 166 RKQEGDRSLWEYPFAVAGVNITFMLIQMLDLEA 187
            +    +    Y +A+ G+N+T M   +L  EA
Sbjct: 193 SRSNHPK--LGYSYAIVGINLTEMAYSLLKSEA 223

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BLAST of Cucsat.G18076 vs. ExPASy Swiss-Prot
Match: Q54VR8 (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 37/111 (33.33%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 73  LQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGF 132
           ++ +  I YD++  EH+ +L  LW    P+      +S++W  +G+QG DP+TDFRG G 
Sbjct: 110 IEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGI 169

Query: 133 ISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQMLD 184
           + L+NL++F+    +  +++L+      S   YPFA+ G+NIT +++ ++D
Sbjct: 170 LGLDNLIYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID 217

[Close]

BLAST of Cucsat.G18076 vs. ExPASy Swiss-Prot
Match: Q8BGF6 (ELMO domain-containing protein 2 OS=Mus musculus OX=10090 GN=Elmod2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17
Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 81  YDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLF 140
           YDS+  +H++ L  LW++  P ++L   IS+QW ++G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 141 FAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQMLDLEA 187
           F++N+      +L +    +    Y +A+ G+N+T M   +L  EA
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEA 223

[Close]

BLAST of Cucsat.G18076 vs. NCBI nr
Match: KAA0039784.1 (ELMO domain-containing protein A-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 383 bits (984), Expect = 3.33e-134
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECL RLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEAGLRSL 191
           MLDLEAGL SL
Sbjct: 181 MLDLEAGLLSL 191

[Close]

BLAST of Cucsat.G18076 vs. NCBI nr
Match: XP_004140510.1 (ELMO domain-containing protein A isoform X1 [Cucumis sativus] >KGN46512.1 hypothetical protein Csa_005207 [Cucumis sativus])

HSP 1 Score: 379 bits (973), Expect = 2.35e-131
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. NCBI nr
Match: XP_008459793.1 (PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis melo])

HSP 1 Score: 377 bits (967), Expect = 1.93e-130
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECL RLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. NCBI nr
Match: XP_038875764.1 (ELMO domain-containing protein A-like isoform X4 [Benincasa hispida])

HSP 1 Score: 374 bits (961), Expect = 7.28e-130
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECLLRLQNRIDIAYDSSI EHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSILEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLL+FA+NFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLYFARNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. NCBI nr
Match: XP_038875761.1 (ELMO domain-containing protein 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 374 bits (961), Expect = 9.00e-130
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECLLRLQNRIDIAYDSSI EHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSILEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLL+FA+NFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLYFARNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. ExPASy TrEMBL
Match: A0A5A7T8J7 (ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00520 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 1.61e-134
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECL RLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEAGLRSL 191
           MLDLEAGL SL
Sbjct: 181 MLDLEAGLLSL 191

[Close]

BLAST of Cucsat.G18076 vs. ExPASy TrEMBL
Match: A0A0A0KDT2 (ELMO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G105170 PE=4 SV=1)

HSP 1 Score: 379 bits (973), Expect = 1.14e-131
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. ExPASy TrEMBL
Match: A0A1S3CBG7 (ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498817 PE=4 SV=1)

HSP 1 Score: 377 bits (967), Expect = 9.34e-131
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECL RLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. ExPASy TrEMBL
Match: A0A6J1KVH1 (ELMO domain-containing protein A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497960 PE=4 SV=1)

HSP 1 Score: 368 bits (944), Expect = 2.97e-127
Identity = 180/186 (96.77%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLTPAQEECL  LQNRIDIAYD+SI EHQEALR LWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

[Close]

BLAST of Cucsat.G18076 vs. ExPASy TrEMBL
Match: A0A6J1F3S5 (ELMO domain-containing protein A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439718 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 1.72e-126
Identity = 180/186 (96.77%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60
           MDDRGGGSFVAVRRISQGLERGNTCHS+SAEVVAGSAAWLGRGLSCVCAQRRESDAR SF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSSSAEVVAGSAAWLGRGLSCVCAQRRESDARSSF 60

Query: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120
           DLT AQEECLLRLQNRIDIAYDSSI EHQEALR LWNVAFPEEELRGLISEQWKEMGWQG
Sbjct: 61  DLTSAQEECLLRLQNRIDIAYDSSILEHQEALRALWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180
           KDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 181 MLDLEA 186
           MLDLEA
Sbjct: 181 MLDLEA 186

The following BLAST results are available for this feature:

BLAST of Cucsat.G18076 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54YW1	6.2e-20	41.51	ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA P...	[more]
Q8IZ81	2.0e-18	39.62	ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1	[more]
Q08DZ3	5.8e-18	32.68	ELMO domain-containing protein 2 OS=Bos taurus OX=9913 GN=ELMOD2 PE=1 SV=1	[more]
Q54VR8	2.9e-17	33.33	ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB P...	[more]
Q8BGF6	4.9e-17	36.79	ELMO domain-containing protein 2 OS=Mus musculus OX=10090 GN=Elmod2 PE=1 SV=1	[more]

BLAST of Cucsat.G18076 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039784.1	3.33e-134	98.95	ELMO domain-containing protein A-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004140510.1	2.35e-131	100.00	ELMO domain-containing protein A isoform X1 [Cucumis sativus] >KGN46512.1 hypoth...	[more]
XP_008459793.1	1.93e-130	99.46	PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis melo]	[more]
XP_038875764.1	7.28e-130	98.39	ELMO domain-containing protein A-like isoform X4 [Benincasa hispida]	[more]
XP_038875761.1	9.00e-130	98.39	ELMO domain-containing protein 2-like isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G18076 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8J7	1.61e-134	98.95	ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0KDT2	1.14e-131	100.00	ELMO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G105170 PE=4 S...	[more]
A0A1S3CBG7	9.34e-131	99.46	ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1KVH1	2.97e-127	96.77	ELMO domain-containing protein A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1F3S5	1.72e-126	96.77	ELMO domain-containing protein A-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006816	ELMO domain	PFAM	PF04727	ELMO_CED12	coord: 66..231 e-value: 5.0E-51 score: 173.1
IPR006816	ELMO domain	PROSITE	PS51335	ELMO	coord: 81..242 score: 30.539059
None	No IPR available	PANTHER	PTHR12771:SF62	ELMO/CED-12 FAMILY PROTEIN-RELATED	coord: 23..261
None	No IPR available	PANTHER	PTHR12771	ENGULFMENT AND CELL MOTILITY	coord: 23..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18076.T4	Cucsat.G18076.T4	mRNA
Cucsat.G18076.T6	Cucsat.G18076.T6	mRNA
Cucsat.G18076.T1	Cucsat.G18076.T1	mRNA
Cucsat.G18076.T2	Cucsat.G18076.T2	mRNA
Cucsat.G18076.T8	Cucsat.G18076.T8	mRNA
Cucsat.G18076.T9	Cucsat.G18076.T9	mRNA
Cucsat.G18076.T16	Cucsat.G18076.T16	mRNA
Cucsat.G18076.T17	Cucsat.G18076.T17	mRNA
Cucsat.G18076.T14	Cucsat.G18076.T14	mRNA
Cucsat.G18076.T15	Cucsat.G18076.T15	mRNA
Cucsat.G18076.T12	Cucsat.G18076.T12	mRNA
Cucsat.G18076.T13	Cucsat.G18076.T13	mRNA
Cucsat.G18076.T10	Cucsat.G18076.T10	mRNA
Cucsat.G18076.T11	Cucsat.G18076.T11	mRNA
Cucsat.G18076.T18	Cucsat.G18076.T18	mRNA
Cucsat.G18076.T29	Cucsat.G18076.T29	mRNA
Cucsat.G18076.T28	Cucsat.G18076.T28	mRNA
Cucsat.G18076.T27	Cucsat.G18076.T27	mRNA
Cucsat.G18076.T26	Cucsat.G18076.T26	mRNA
Cucsat.G18076.T25	Cucsat.G18076.T25	mRNA
Cucsat.G18076.T23	Cucsat.G18076.T23	mRNA
Cucsat.G18076.T22	Cucsat.G18076.T22	mRNA
Cucsat.G18076.T21	Cucsat.G18076.T21	mRNA
Cucsat.G18076.T30	Cucsat.G18076.T30	mRNA
Cucsat.G18076.T7	Cucsat.G18076.T7	mRNA
Cucsat.G18076.T20	Cucsat.G18076.T20	mRNA
Cucsat.G18076.T5	Cucsat.G18076.T5	mRNA
Cucsat.G18076.T3	Cucsat.G18076.T3	mRNA
Cucsat.G18076.T19	Cucsat.G18076.T19	mRNA
Cucsat.G18076.T24	Cucsat.G18076.T24	mRNA
Cucsat.G18076.T31	Cucsat.G18076.T31	mRNA