Cucsat.G18061 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18061
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Structural constituent of nuclear pore isoform 1
Location	ctg3345: 4689216 .. 4693229 (+)
RNA-Seq Expression	Cucsat.G18061
Synteny	Cucsat.G18061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATAAGAACATATGAACCGAAGTTTCGTTTTCTATAATAAAAGAACAATAGAGAAAAAGAAAAAAGATTCCTGTACGGAATAGCACTGGAAAAGAATCAGATGGCTTTATCAATTAGTTTTGGGAACAAATCCTTCAAAACTATCTCCACATTTACACTCACAAACACACTTCTTCTTCTTCAATGGCCTTCAAATCATCCTCTCAAGTTTTATCCACCAATCATTCCACTGATAATACTTCCAACAGCTTACGCCATGGTGGAAGAGAAATTGAAACGCTACCCACCCCCTTTCCCAATTTTGATTTGGGACCTGTTCCATCTGCTGTAGAAGTTGATGCTGCGGTTACTGCTCTTCGGAGGTGAAATTTTATTACGTTTCATTCTCTATTTTTCTGGGTATCTGTTCTTTTTTTTTTGGGTCCCTGTTTTTTCATCTTGGCATGAGATTGAAGTCGACCAAATTTTGTTGGGTTTTTTTTGTGTGAGTTGTGTGTATGATTCTTTCTTGTGGATTTAGGGTGTATAAGTAGAGATTTTTTTTTATGGTAATTGTTCGTTTTTTGGTTTGTGTTCACTAACATATGGATTTGTAAAGCTTATACAAATTTTCCTTTGACAACTTGAAAGGGGCAAGTAAGAGAAAAAATTGTGGAAAAGCTCATTAAAGTTTTGTACTTCGTACAAAATATTATACAGTTACTGATGGGGAGATATATGTCAGTTTCGTTCGTGACCTTTGAAATTCTTGGACAATTTTCCCTGGAGGAGATAAAAATCTATGGAGAATTTGAAGATTAAGGATATCTATTTGGTTTGAACACTTTTTAGGGATGATTTGTTTATCATGCCTTTAGTTTTTGTTCACAAATGTGTTGTATGGTAACATGGTATAGGATTTTACATGTAGAGAATTGATTGTGTGTTTTCTTAAAAAGGAAACCGTTTTGACCTCACTCTTGGTGTTTTGGAAGTTCAGAATTTAAATTTGTTCTTAAGAAGTTCTTGACATGATAAAAAGTTCTCATGGAGTTGCAACATTAATCAGTTTGTTGCAGGAGTGGTTTTCTCTTGAATCCGTGTCAAAGTGGCTTCAGCCGCTGATGAACTCCAGTTGTTCAAGCATTTTGGATTCTCGTGGTTATCGATTACTTTGTAAAGGTTTTAAATGGATACTAATAGATCCTACTTTCAAGGTACAACAAAATTTTCTTTGACTTGGTGAATGTTAAATTTGATAGTGTGTGGTTCCATCTCAAAACCAATTGGCAATGAGAGGAGTAGCCCATCTATGTTATATGGAGTATGAGTCCCCTTGGTTTTTCCAACGTGGGACTCTCAACTTCTCCAAACATGCTCCTTCAAGATGGTGCCTCCTTGGGTTCAGCTATCTTGGACCGAATACCTGTTTGGGTTTAATGGACTTTGATCCCATGAACAATTTTGGGGCAGAATAGTTTTGTGAAATATTTCCCCTTTTCCTCTATATTCATGTAATGACCGATGGTCAATATATATACATTTGAAAATCCCTATAATTTGGGATGAGAAGAATGAAATTATAAAATAATTCATCACACAATAAATGCCAAGAGAAATGTGGCATTATGTTACTGGAGAATGAAAAACAAACTTGAGAATGAGAAACAAATTCCTTCACTATATTAGCTTTCTCTACTTACCCACTGTAACTTCTTTATTTCTTCACCTGATACCATCTTCTCTAACGGTGAAAGCTTACAACAACAATCCTGATTAAAGAATGAAAGCTTTCACATCTCAAAAGCAACCCAATAGTATAATAAAACCTCTCCTTTTATCTTACCATTGTCTTCCATGACTCTTTCCAAAAATATCTCACACCAAGCCTCCCTAATATAATTTAATTACAATAATTTAGGAATGGACAGCAAATTTTTGCACATAACAGACCAACTGAGCTGTAAAGACACATTTGGATCTCATTCACAACATTTTTGATATATTTATACTTTTGAGGCAAATAGACCATCAAAAGAATTTAAATTCCCCACTCCCTCCTGACTAAACATGACTGGAACTTTGAAATTGTTAAGTTAATGTAACTTAAATATGAAAATGAATAAATCAAACATCTTTCTTTGTTGTATTATTTTTTTTTGGAAATTATTTTCTTCAAAGATTTCCGTTTAATTTAGGGACTGGTAATTTCACTGTGTTTGGACAAAGATGTTTGGAACGCTATTGGAAACCATGGGATTGTAGAGAAGCTCCAGGAGTTACCTTCTTCAGGTGTGTTATGAACTCTGATAAATATAGTTACTATGTAATATAGAAATAGCAAAATTTATTATTGGCTGTATGGGGCATATATATCTTAATTATTTTAGGTGGTGGAAAATACTCCAAATTTTTGGTTTAAGGGGCAGAATATTTTTCGTGAGTGCAGCAGTTGATTATTATTTGTGCAGAAAGAAACATTACTTTTCCTTGAAGTGTTGGAGTTACAATCAAGGATACAAAGAGCTCACCTAAAATGTCTATATTCAAAGTTGACAATGACTTGGGCCTCTTGTCATACCAGCTTAGAGGTCTCTAATTTGAACCTTTCAGTGAGCTTTAGGCCAAAAACCCATGTTGTCTCTCCTATCTGGGCCTTAGGGTGGGGTTTGAGTGCCCTCGGGTATAGGGGAGCAAAGCCCCAGCTCCTGGTTATCAAAATAATAACAATAATAATAAAAGAACGATGCTTAAAGTGGAAGAAAAACAAGAATCCATTGAATTCTTTCTACCAGTTAAGCAAACAATGGAAACTTTTTTCTAGAAGAGCTGTTGCACTACACCCTTAAACATTGCTAACCAAACACCAATGGACTTGCTTGGCGTTGGTACCAGTAATGTGAATAAGAATTATCTTACTTGCTAATTGTCTGTGGCACTTTTTAAAGTAGACATCCACTTTATGGTTTGGTGTGATTGCTCCGGAATATGGTTAGAACTTGAGGAAGGAAGACTGAAAAGACTGAATTATTTAGGTGAAGTCATATTAATAAAGGAAAATCCAAACTTTCTACCGGTGGAGGGGATAAAGTTGAGTTCTGGAAGTGATATTTGAGGGCACGTGCTTCCCTTCACTTTCTTTTTCTCCTCAGTCTCTTGTTCACAACAGCAAATTTTATCTTGTTTGGATATTAACCAAGCTGGATATGAGCGAGCCTTCTCTCTGAGACTTTAGACCTTAATTGGTAGCGAACTATTAATGGACTCTTCTCTTCTAAATTGTTATTTCAATCTTTATTTAAGTTTTCATTTCAACTGAGCAGGGCAGAGAAATCTTGAATGATTGGCATTCTAAGGAGATCCAACCTTCTCCCATTCTATTTTGCTTCAAGACTTGGATTATGTATATTATTGTTATTGTTATTCTCTCAGGTGGAAATGGAAACACTGGGAGCTCAAAACAGGGTTCCGAGTTTGGTAATGTCATTCTAAGCTGGATTTTGCAAATGTCATTCTCAAAAATCAGGGAGCTATTGGAAAACTTTGTCTCCCTGTTGAACTATGCATTTTGTTTTCCTGGGAAAGAGAACCTGAAGCCAGAGAAAAAAGATGAGATGGATGAAAAAATCCAATCTGCATTTATTCTGTCCTTGGTCATCATGATGATTGTGGTCGTTGCTCGAGTTCAGATTGCATAAAATTTTCTGACCATGGTTGTACCCATCCTTCTATTTAAGCTAAGTTATGTAAAACTTCTTTGCTTCTACTTGCAGTATAACACTCATACAACTTTGTCACTGTGAATCAACATTGCAATGTACTTTTTTATATTAGTCTTGCTTTCTAAAATTTAGATCTGATTTAGTTTTGGGATACTATTTCATACCTACTTTGCGAGGCATTATATCAGAAGTTTTCAAGACATATACATTATACTATCTGGAGATATCTATATTTCTCTCAAGCCAATGAGGAATAGGGAAATGGATTTGTATAAAAAATCGTCAGTTTTACATACAGATATCTAAA

Coding sequence (CDS)

ATGGCCTTCAAATCATCCTCTCAAGTTTTATCCACCAATCATTCCACTGATAATACTTCCAACAGCTTACGCCATGGTGGAAGAGAAATTGAAACGCTACCCACCCCCTTTCCCAATTTTGATTTGGGACCTGTTCCATCTGCTGTAGAAGTTGATGCTGCGGTTACTGCTCTTCGGAGTTTGTTGCAGGAGTGGTTTTCTCTTGAATCCGTGTCAAAGTGGCTTCAGCCGCTGATGAACTCCAGTTGTTCAAGCATTTTGGATTCTCGTGGTTATCGATTACTTTGTAAAGGTTTTAAATGGATACTAATAGATCCTACTTTCAAGGGACTGGTAATTTCACTGTGTTTGGACAAAGATGTTTGGAACGCTATTGGAAACCATGGGATTGTAGAGAAGCTCCAGGAGTTACCTTCTTCAGGTGGAAATGGAAACACTGGGAGCTCAAAACAGGGTTCCGAGTTTGGTAATGTCATTCTAAGCTGGATTTTGCAAATGTCATTCTCAAAAATCAGGGAGCTATTGGAAAACTTTGTCTCCCTGTTGAACTATGCATTTTGTTTTCCTGGGAAAGAGAACCTGAAGCCAGAGAAAAAAGATGAGATGGATGAAAAAATCCAATCTGCATTTATTCTGTCCTTGGTCATCATGATGATTGTGGTCGTTGCTCGAGTTCAGATTGCATAA

Protein sequence

MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKDVWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA

Homology

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BLAST of Cucsat.G18061 vs. NCBI nr
Match: XP_004140493.1 (uncharacterized protein LOC101205732 [Cucumis sativus] >KGN46556.1 hypothetical protein Csa_004911 [Cucumis sativus])

HSP 1 Score: 441 bits (1133), Expect = 1.08e-155
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60
           MAFKSSSQVLST+HSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS
Sbjct: 1   MAFKSSSQVLSTSHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60

Query: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKD 120
           LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLL KGFKWILIDPTFKGLVISLCLDKD
Sbjct: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLRKGFKWILIDPTFKGLVISLCLDKD 120

Query: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180
           VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS
Sbjct: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180

Query: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA
Sbjct: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228

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BLAST of Cucsat.G18061 vs. NCBI nr
Match: XP_008459730.1 (PREDICTED: uncharacterized protein LOC103498772 [Cucumis melo] >KAA0053454.1 uncharacterized protein E6C27_scaffold46837G00010 [Cucumis melo var. makuwa] >TYK24756.1 uncharacterized protein E5676_scaffold266G003190 [Cucumis melo var. makuwa])

HSP 1 Score: 387 bits (994), Expect = 1.60e-134
Identity = 197/228 (86.40%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60
           MAFKSSS+VLST+HST NTSNSLRHG REIE LPTPFPNFDLGPVPS +EV+AAV AL+S
Sbjct: 1   MAFKSSSEVLSTSHSTGNTSNSLRHG-REIEALPTPFPNFDLGPVPSPLEVEAAVAALQS 60

Query: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKD 120
           LLQEWFSLES+SKWLQPLMNSS SSIL SRGY+LLCKGF+WIL DPTFKGLVISLCLDKD
Sbjct: 61  LLQEWFSLESMSKWLQPLMNSSSSSILHSRGYQLLCKGFQWILTDPTFKGLVISLCLDKD 120

Query: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180
           VWNAI NHGIVEKLQELPSSGGNGNTGSSKQG +FGNVILSWILQ+S +KIREL+ENFVS
Sbjct: 121 VWNAIRNHGIVEKLQELPSSGGNGNTGSSKQGPDFGNVILSWILQISLTKIRELIENFVS 180

Query: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           LLN AFCFPGKE LKPEKKDE+DEKIQS+ +LSLV+M+IVVVARVQIA
Sbjct: 181 LLNNAFCFPGKEKLKPEKKDEIDEKIQSSLVLSLVVMLIVVVARVQIA 227

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BLAST of Cucsat.G18061 vs. NCBI nr
Match: XP_038875839.1 (uncharacterized protein LOC120068201 [Benincasa hispida])

HSP 1 Score: 310 bits (795), Expect = 3.83e-104
Identity = 172/233 (73.82%), Postives = 192/233 (82.40%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLP----TPFPNFDLGPVPSAVEVDAAVT 60
           M FKS S V ST++ +D+T NSL +G REIE +     T  P  DLGPVPS VEVDAAV 
Sbjct: 1   MDFKSPSVVSSTSNCSDDTCNSLLYG-REIEAIDRKAGTRLPKIDLGPVPSPVEVDAAVA 60

Query: 61  ALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLC 120
           AL+SLLQE FSL SVSKWLQPLMNS  SSIL SRGYRLLCKG +W+L DPTFKGLVISLC
Sbjct: 61  ALQSLLQESFSLGSVSKWLQPLMNSCDSSILHSRGYRLLCKGLQWLLTDPTFKGLVISLC 120

Query: 121 LDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELL 180
           LDKDVWNAI N+GIVEKLQELPSS GGNGN  SSKQG +FGN ILSWIL MS +KIREL+
Sbjct: 121 LDKDVWNAIRNNGIVEKLQELPSSEGGNGNPESSKQGPDFGNAILSWILLMSLTKIRELI 180

Query: 181 ENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           ENFV LLN AF FPGKE LK EK+DE+DEKIQS+F LSLVI++IV+VARVQ+A
Sbjct: 181 ENFVFLLNNAFRFPGKEKLKAEKRDEIDEKIQSSFFLSLVILLIVIVARVQMA 232

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BLAST of Cucsat.G18061 vs. NCBI nr
Match: XP_022959467.1 (uncharacterized protein LOC111460433 [Cucurbita moschata])

HSP 1 Score: 291 bits (745), Expect = 1.59e-96
Identity = 162/234 (69.23%), Postives = 192/234 (82.05%), Query Frame = 0


Query: 1   MAFKSSSQVLST-NHSTDNTSNSLRHGGREIETLPTP----FPNFDLGPVPSAVEVDAAV 60
           MAFKS   V ST N+   +T  S    GREI++L T        FDLGPVPS  EVDAAV
Sbjct: 1   MAFKSRPVVSSTCNNCGCDTCKSF-FCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAV 60

Query: 61  TALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISL 120
           TAL+SLLQE+FS ES+SKWLQPL+NS  SSIL SRGY+LLCKGF+W+L DPT KGLV+SL
Sbjct: 61  TALQSLLQEYFSTESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKGLVVSL 120

Query: 121 CLDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFSKIREL 180
           CLDK+VW+AI N+GIVEKLQELPSS GGNGN GSSK+G++ G+VILSWILQMS +KI EL
Sbjct: 121 CLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKRGADIGSVILSWILQMSLTKIWEL 180

Query: 181 LENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           ++NFV LLN AF FPGKE LK EK++E+DEKIQS+F+LSL+IM+IVVV+RVQIA
Sbjct: 181 IQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 233

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BLAST of Cucsat.G18061 vs. NCBI nr
Match: XP_023549361.1 (uncharacterized protein LOC111807735 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289 bits (739), Expect = 2.24e-95
Identity = 157/233 (67.38%), Postives = 189/233 (81.12%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPN----FDLGPVPSAVEVDAAVT 60
           MAFKS   V ST ++    +      G EI++L T  P     FDLGPVPS  EVDAAVT
Sbjct: 17  MAFKSPPVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPKSLHKFDLGPVPSRAEVDAAVT 76

Query: 61  ALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLC 120
           AL+SLLQE+FS+ES+SKWLQPL+NS  SSIL SRGY+LLCKGF+W+L DP+ KGLV+SLC
Sbjct: 77  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLC 136

Query: 121 LDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELL 180
           LDK+VW+AI N+GIVEKLQELPSS GGNGN GSSK G++ G+VILSWILQMS +KI EL+
Sbjct: 137 LDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELI 196

Query: 181 ENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           +NFV LLN AF FPGKE LK EK++E+DEKIQS+F+LSL+IM+IVVV+R QIA
Sbjct: 197 QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQIA 249

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BLAST of Cucsat.G18061 vs. ExPASy TrEMBL
Match: A0A0A0KFP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108540 PE=4 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 5.24e-156
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60
           MAFKSSSQVLST+HSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS
Sbjct: 1   MAFKSSSQVLSTSHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60

Query: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKD 120
           LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLL KGFKWILIDPTFKGLVISLCLDKD
Sbjct: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLRKGFKWILIDPTFKGLVISLCLDKD 120

Query: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180
           VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS
Sbjct: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180

Query: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA
Sbjct: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228

[Close]

BLAST of Cucsat.G18061 vs. ExPASy TrEMBL
Match: A0A5D3DM87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003190 PE=4 SV=1)

HSP 1 Score: 387 bits (994), Expect = 7.77e-135
Identity = 197/228 (86.40%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60
           MAFKSSS+VLST+HST NTSNSLRHG REIE LPTPFPNFDLGPVPS +EV+AAV AL+S
Sbjct: 1   MAFKSSSEVLSTSHSTGNTSNSLRHG-REIEALPTPFPNFDLGPVPSPLEVEAAVAALQS 60

Query: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKD 120
           LLQEWFSLES+SKWLQPLMNSS SSIL SRGY+LLCKGF+WIL DPTFKGLVISLCLDKD
Sbjct: 61  LLQEWFSLESMSKWLQPLMNSSSSSILHSRGYQLLCKGFQWILTDPTFKGLVISLCLDKD 120

Query: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180
           VWNAI NHGIVEKLQELPSSGGNGNTGSSKQG +FGNVILSWILQ+S +KIREL+ENFVS
Sbjct: 121 VWNAIRNHGIVEKLQELPSSGGNGNTGSSKQGPDFGNVILSWILQISLTKIRELIENFVS 180

Query: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           LLN AFCFPGKE LKPEKKDE+DEKIQS+ +LSLV+M+IVVVARVQIA
Sbjct: 181 LLNNAFCFPGKEKLKPEKKDEIDEKIQSSLVLSLVVMLIVVVARVQIA 227

[Close]

BLAST of Cucsat.G18061 vs. ExPASy TrEMBL
Match: A0A1S3CC23 (uncharacterized protein LOC103498772 OS=Cucumis melo OX=3656 GN=LOC103498772 PE=4 SV=1)

HSP 1 Score: 387 bits (994), Expect = 7.77e-135
Identity = 197/228 (86.40%), Postives = 214/228 (93.86%), Query Frame = 0


Query: 1   MAFKSSSQVLSTNHSTDNTSNSLRHGGREIETLPTPFPNFDLGPVPSAVEVDAAVTALRS 60
           MAFKSSS+VLST+HST NTSNSLRHG REIE LPTPFPNFDLGPVPS +EV+AAV AL+S
Sbjct: 1   MAFKSSSEVLSTSHSTGNTSNSLRHG-REIEALPTPFPNFDLGPVPSPLEVEAAVAALQS 60

Query: 61  LLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKD 120
           LLQEWFSLES+SKWLQPLMNSS SSIL SRGY+LLCKGF+WIL DPTFKGLVISLCLDKD
Sbjct: 61  LLQEWFSLESMSKWLQPLMNSSSSSILHSRGYQLLCKGFQWILTDPTFKGLVISLCLDKD 120

Query: 121 VWNAIGNHGIVEKLQELPSSGGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVS 180
           VWNAI NHGIVEKLQELPSSGGNGNTGSSKQG +FGNVILSWILQ+S +KIREL+ENFVS
Sbjct: 121 VWNAIRNHGIVEKLQELPSSGGNGNTGSSKQGPDFGNVILSWILQISLTKIRELIENFVS 180

Query: 181 LLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           LLN AFCFPGKE LKPEKKDE+DEKIQS+ +LSLV+M+IVVVARVQIA
Sbjct: 181 LLNNAFCFPGKEKLKPEKKDEIDEKIQSSLVLSLVVMLIVVVARVQIA 227

[Close]

BLAST of Cucsat.G18061 vs. ExPASy TrEMBL
Match: A0A6J1H4L7 (uncharacterized protein LOC111460433 OS=Cucurbita moschata OX=3662 GN=LOC111460433 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 7.72e-97
Identity = 162/234 (69.23%), Postives = 192/234 (82.05%), Query Frame = 0


Query: 1   MAFKSSSQVLST-NHSTDNTSNSLRHGGREIETLPTP----FPNFDLGPVPSAVEVDAAV 60
           MAFKS   V ST N+   +T  S    GREI++L T        FDLGPVPS  EVDAAV
Sbjct: 1   MAFKSRPVVSSTCNNCGCDTCKSF-FCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAV 60

Query: 61  TALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLCKGFKWILIDPTFKGLVISL 120
           TAL+SLLQE+FS ES+SKWLQPL+NS  SSIL SRGY+LLCKGF+W+L DPT KGLV+SL
Sbjct: 61  TALQSLLQEYFSTESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKGLVVSL 120

Query: 121 CLDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFSKIREL 180
           CLDK+VW+AI N+GIVEKLQELPSS GGNGN GSSK+G++ G+VILSWILQMS +KI EL
Sbjct: 121 CLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKRGADIGSVILSWILQMSLTKIWEL 180

Query: 181 LENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228
           ++NFV LLN AF FPGKE LK EK++E+DEKIQS+F+LSL+IM+IVVV+RVQIA
Sbjct: 181 IQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 233

[Close]

BLAST of Cucsat.G18061 vs. ExPASy TrEMBL
Match: A0A6J1L5J5 (uncharacterized protein LOC111499314 OS=Cucurbita maxima OX=3661 GN=LOC111499314 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.74e-90
Identity = 145/206 (70.39%), Postives = 173/206 (83.98%), Query Frame = 0


Query: 27  GREIETLPTP----FPNFDLGPVPSAVEVDAAVTALRSLLQEWFSLESVSKWLQPLMNSS 86
           GREI++L T        FDLGPVPS  EVDAAV AL+SLLQE+FS+ES+SKWLQPL+NS 
Sbjct: 28  GREIQSLDTKAGKSLHKFDLGPVPSRSEVDAAVIALQSLLQEYFSIESLSKWLQPLVNSY 87

Query: 87  CSSILDSRGYRLLCKGFKWILIDPTFKGLVISLCLDKDVWNAIGNHGIVEKLQELPSS-G 146
            SSIL SRGY LLCKG +W+L DPT KGLV+SLCLDK+V +AI N+GIVEKLQELPSS G
Sbjct: 88  DSSILHSRGYHLLCKGLQWLLTDPTLKGLVVSLCLDKNVSDAIKNNGIVEKLQELPSSEG 147

Query: 147 GNGNTGSSKQGSEFGNVILSWILQMSFSKIRELLENFVSLLNYAFCFPGKENLKPEKKDE 206
           GNGN GSSK G++ G+VILSWILQMS +KI EL++NFV LLN AF FPGKE L+ EK++E
Sbjct: 148 GNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQNFVDLLNNAFLFPGKEKLEGEKREE 207

Query: 207 MDEKIQSAFILSLVIMMIVVVARVQI 227
           +DEKIQS+F+LSL+IM+IVVV+R QI
Sbjct: 208 IDEKIQSSFVLSLIIMLIVVVSRAQI 233

The following BLAST results are available for this feature:

BLAST of Cucsat.G18061 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G18061 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140493.1	1.08e-155	99.12	uncharacterized protein LOC101205732 [Cucumis sativus] >KGN46556.1 hypothetical ...	[more]
XP_008459730.1	1.60e-134	86.40	PREDICTED: uncharacterized protein LOC103498772 [Cucumis melo] >KAA0053454.1 unc...	[more]
XP_038875839.1	3.83e-104	73.82	uncharacterized protein LOC120068201 [Benincasa hispida]	[more]
XP_022959467.1	1.59e-96	69.23	uncharacterized protein LOC111460433 [Cucurbita moschata]	[more]
XP_023549361.1	2.24e-95	67.38	uncharacterized protein LOC111807735 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G18061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFP6	5.24e-156	99.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108540 PE=4 SV=1	[more]
A0A5D3DM87	7.77e-135	86.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CC23	7.77e-135	86.40	uncharacterized protein LOC103498772 OS=Cucumis melo OX=3656 GN=LOC103498772 PE=...	[more]
A0A6J1H4L7	7.72e-97	69.23	uncharacterized protein LOC111460433 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A6J1L5J5	2.74e-90	70.39	uncharacterized protein LOC111499314 OS=Cucurbita maxima OX=3661 GN=LOC111499314...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR33625:SF2	SUBFAMILY NOT NAMED	coord: 7..140
None	No IPR available	PANTHER	PTHR33625	OS08G0179900 PROTEIN	coord: 7..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18061.T1	Cucsat.G18061.T1	mRNA
Cucsat.G18061.T2	Cucsat.G18061.T2	mRNA
Cucsat.G18061.T4	Cucsat.G18061.T4	mRNA
Cucsat.G18061.T7	Cucsat.G18061.T7	mRNA
Cucsat.G18061.T3	Cucsat.G18061.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane