Cucsat.G18060 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18060
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Cyclin
Location	ctg3345: 4681677 .. 4683015 (+)
RNA-Seq Expression	Cucsat.G18060
Synteny	Cucsat.G18060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAGCTGTTTTGTTTGTACTTTGTCTTTACAAACAACAGGCACCCATATCTTATTTCTTGATCTTCATCTTCTTCATCTTTTTCCACTCACCTTCCCAAAATCCAAATTCCCTCCCTATATAAATCCCTCCATTTCTCATTTTCATTTCCAAAGATTCTCAATTTTATCATATAATTATTAAATATGGCCGCAAACTCCAATAATATGATTATTCCAATTTCCCCAAGAAAGCTTCGATCTGATTTGTACTCTTACTCTCACAGTGAGGATTATTCTAAAATCCCATTAGTTATCAGTGTTGTTGCTTCTTTGATCGAGAGAAATATGGCCAGAAACCATCGTATTGCCAGAAACTACACGTCGTCTAAGGGTGCTGTTGTTTTCGATTGCCGTGACGAGGCCCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATATTTCGTTACACCAAAGCTGCTCCTTGTGTCTACGTTGTTGCTTATGTTTATATTGATCGATTTTGCCAACAGAATCCTTCCTTTAGGATTACTCTTAGAAATGTTCATCGTCTTCTCATCACTACCGTCATGGTTGCTTCTAAATATGTCGAGGACATGTAAGTCTTCTCCTCTTTTCCAATAACTTTTTTATTCCATCTATATAAGTTATTGAGTGATGATTTAACAAAGTACTGTTTGGTTTGTTTTGGGGAACAGGAACTACAGAAACTCGTACTACGCAAGAGTCGGGGGATTGACAACAAAGGAAATGAACCAACTAGAGATGGATTTTTTGTTTCTAATGAGATTCAAATGCCATGTAAATCTAAGTGTTTTTGAGAGCTATTGTTGTCATTTAGAGAGAGAAGTTAGCATTGGCGGAGGATACCATATAGAAAGAACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATATTAATCAAATCGCTCGTATTATGTTGTAGAAATCGAAAACCCTATAAATTAAATTAATCACTAAATATATATCTATACACACTTGTTTTTCCTTATCATTATTTTATATATATATATAGCCAGGGTGTCTTTGTAATTAATTACAATATACAAGGTTGCCGCTATTATATTGTATAGTTTTATAATGTAGTTGGCTGTGTTTTGAATCATTGTTACATTTGCCGACACTTGCTTAATATTTACTCATGTAATACGTACAAAAGACCTTTTTTTTTTCTTTTCTCTTTAATTATGTAACTCACTATGCTGAGATTTTAATATAGTGTGTTTAATGTATTGAAAAGGACAATTTTGGAGAGATGTTATTGGATCATTGTCTTTTTACTTTATTTTTTTATATTC

Coding sequence (CDS)

ATGGCCGCAAACTCCAATAATATGATTATTCCAATTTCCCCAAGAAAGCTTCGATCTGATTTGTACTCTTACTCTCACAGTGAGGATTATTCTAAAATCCCATTAGTTATCAGTGTTGTTGCTTCTTTGATCGAGAGAAATATGGCCAGAAACCATCGTATTGCCAGAAACTACACGTCGTCTAAGGGTGCTGTTGTTTTCGATTGCCGTGACGAGGCCCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATATTTCGTTACACCAAAGCTGCTCCTTGTGTCTACGTTGTTGCTTATGTTTATATTGATCGATTTTGCCAACAGAATCCTTCCTTTAGGATTACTCTTAGAAATGTTCATCGTCTTCTCATCACTACCGTCATGGTTGCTTCTAAATATGTCGAGGACATGAACTACAGAAACTCGTACTACGCAAGAGTCGGGGGATTGACAACAAAGGAAATGAACCAACTAGAGATGGATTTTTTGTTTCTAATGAGATTCAAATGCCATGTAAATCTAAGTGTTTTTGAGAGCTATTGTTGTCATTTAGAGAGAGAAGTTAGCATTGGCGGAGGATACCATATAGAAAGAACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATATTAATCAAATCGCTCGTATTATGTTGTAG

Protein sequence

MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML

Homology

[Close]

BLAST of Cucsat.G18060 vs. ExPASy Swiss-Prot
Match: Q9SHD3 (Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.7e-83
Identity = 154/220 (70.00%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSSKGAVVFDC 69
           + ISPRKLRSDLYSYS+ +D + +PLVISV++SLIER +ARN RI+R+Y       VFDC
Sbjct: 4   LAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDC 63

Query: 70  RDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVM 129
           R E PDM+IQ YLERIFRYTKA P VYVVAYVYIDRFCQ N  FRI+L NVHRLLITT+M
Sbjct: 64  R-EIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIM 123

Query: 130 VASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 189
           +ASKYVEDMNY+NSY+A+VGGL T+++N LE++FLFLM FK HVN+SVFESYCCHLEREV
Sbjct: 124 IASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREV 183

Query: 190 SIGGGYHIERTLRCAEELKSKQNQQTT---YINQIARIML 227
           SIGGGY IE+ LRCAEE+KS+Q  Q     + +Q +RIML
Sbjct: 184 SIGGGYQIEKALRCAEEIKSRQIVQDPKHHHHHQFSRIML 222

[Close]

BLAST of Cucsat.G18060 vs. ExPASy Swiss-Prot
Match: Q9M205 (Cyclin-U2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-2 PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-79
Identity = 152/226 (67.26%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSSKGA----V 69
           + ISPRKLRSDLYSYS+ ++ SK PLVISV++SLI+R + RN RI+R    S GA     
Sbjct: 7   LTISPRKLRSDLYSYSY-QNNSKTPLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQ 66

Query: 70  VFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHRLLI 129
           +FDCR E PDM+IQ YL RIFRYTKA P VYVVAYVYIDRFCQ NP FRI+L NVHRLLI
Sbjct: 67  IFDCR-EIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLI 126

Query: 130 TTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHL 189
           TT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LE++FLFLM FK HVN+SVFESYCCHL
Sbjct: 127 TTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHL 186

Query: 190 EREVSIGGGYHIERTLRCAEELKSKQ-----NQQTTYINQIARIML 227
           EREVS GGGY IE+ LRCAEE+KS+Q      +   + +Q+ARI+L
Sbjct: 187 EREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

[Close]

BLAST of Cucsat.G18060 vs. ExPASy Swiss-Prot
Match: Q7FAT5 (Cyclin-P2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP2-1 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.1e-45
Identity = 99/208 (47.60%), Postives = 141/208 (67.79%), Query Frame = 0


Query: 16  KLRSDLYSYSHSEDYS---KIPLVISVVASLIERNMARNHR---IARNYTSSKGAVVFDC 75
           +L SD+Y+    +D +     P+V+SV+ASL+ER++ARN R    A +  +++ A  FD 
Sbjct: 5   ELASDVYALPCGDDGTTALSTPVVVSVLASLLERHIARNERDQAAAADGEAARRARAFD- 64

Query: 76  RDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVM 135
                DMS+  +LER  RY   +P VYVVAY Y+DR  ++    R+   N  RLL T ++
Sbjct: 65  SGTVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDRL-RRGDGVRVVSANAQRLLTTAIL 124

Query: 136 VASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 195
           VASK+VED NY+NSY+A VGGLT  E++ LE+DFLFLM+F+ +V++SVF+SYC HLEREV
Sbjct: 125 VASKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLEREV 184

Query: 196 SIGGGYHIERTLR----CAEELKSKQNQ 214
           S GGGY +ER L+    C+ E +++Q Q
Sbjct: 185 SYGGGYQVERCLKKALVCSGEAQAQQRQ 210

[Close]

BLAST of Cucsat.G18060 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.0e-34
Identity = 75/164 (45.73%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 28  EDYSKIPLVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFR 87
           E+ S +  +I+ ++SL+ER    N    R  T S+   VF      P ++IQ YLERIF+
Sbjct: 5   ENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSR-PTITIQSYLERIFK 64

Query: 88  YTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYAR 147
           Y   +P  +VVAYVY+DRF  + PS  I   NVHRLLIT+VMVA+K+++D+ Y N+YYA+
Sbjct: 65  YANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAK 124

Query: 148 VGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSI 192
           VGG++TKEMN LE+DFLF + F+ +V  + F +Y  +L++E+++
Sbjct: 125 VGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]

BLAST of Cucsat.G18060 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 66/158 (41.77%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 34  PLVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAP 93
           P V+++++ ++E+ +ARN  +A+       ++       AP +SI  YLERI++YTK +P
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 94  CVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTT 153
             +VV YVYIDR   ++P   +   NVHRLL+T VM+A+K ++D++Y N +YARVGG++ 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 154 KEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSI 192
            ++N++E++ LFL+ F+  V+  VFESYC HLE+E+ +
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]

BLAST of Cucsat.G18060 vs. NCBI nr
Match: XP_004140492.1 (cyclin-U2-1 [Cucumis sativus] >KGN46558.1 hypothetical protein Csa_004772 [Cucumis sativus])

HSP 1 Score: 455 bits (1170), Expect = 2.12e-161
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60
           MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS
Sbjct: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of Cucsat.G18060 vs. NCBI nr
Match: XP_008459728.2 (PREDICTED: cyclin-U2-1 [Cucumis melo])

HSP 1 Score: 433 bits (1113), Expect = 1.04e-152
Identity = 217/226 (96.02%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60
           MA +S+N+IIPISPRKLRSDLYSYS+SEDYSKIPLVISVVASLIERNMARNHRIARNY S
Sbjct: 1   MANSSSNIIIPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYMS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQ YLERIFRYTKAAP VYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLM+FKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of Cucsat.G18060 vs. NCBI nr
Match: XP_038875511.1 (cyclin-U2-1 [Benincasa hispida])

HSP 1 Score: 382 bits (982), Expect = 9.29e-133
Identity = 203/233 (87.12%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNY-- 60
           MA +SN   IPISPRKLRSDLYSY+  ED SKIPLVISVVASLIER+MARNHRIA+NY  
Sbjct: 1   MAKSSN---IPISPRKLRSDLYSYN--ED-SKIPLVISVVASLIERSMARNHRIAKNYMS 60

Query: 61  -----TSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSF 120
                +SS+  VVFDC  EAPDMSIQCYLERIFRYT+AAPCVYVVAYVYIDRFCQQNPSF
Sbjct: 61  ICRDHSSSRAGVVFDCH-EAPDMSIQCYLERIFRYTRAAPCVYVVAYVYIDRFCQQNPSF 120

Query: 121 RITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHV 180
           RITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLFLM FKCHV
Sbjct: 121 RITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEVDFLFLMGFKCHV 180

Query: 181 NLSVFESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           NLSVFESYCCHLEREVSIGGGYHIE+TLRCAEELKSKQNQQTTY NQ+ARIML
Sbjct: 181 NLSVFESYCCHLEREVSIGGGYHIEKTLRCAEELKSKQNQQTTY-NQMARIML 225

[Close]

BLAST of Cucsat.G18060 vs. NCBI nr
Match: KAG7013796.1 (Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (905), Expect = 4.33e-121
Identity = 183/224 (81.70%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 8   MIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSS-----K 67
           M +PISPR LRSD+YSYS+ E+ S  PLVI VVASLIER+MARNHRIA+N  S       
Sbjct: 1   MALPISPRSLRSDVYSYSY-EERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRS 60

Query: 68  GAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHR 127
            A+VF+CR EAPDMSIQCYLERIFRYTK  P VYVVAYVYIDRFCQQNP FRI LRNVHR
Sbjct: 61  RALVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHR 120

Query: 128 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYC 187
           LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYC
Sbjct: 121 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYC 180

Query: 188 CHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           CHLEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 181 CHLEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 221

[Close]

BLAST of Cucsat.G18060 vs. NCBI nr
Match: XP_023006659.1 (cyclin-U2-2 [Cucurbita maxima])

HSP 1 Score: 353 bits (905), Expect = 4.33e-121
Identity = 183/224 (81.70%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 8   MIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSS-----K 67
           M +PISPR LRSD+YSYS+ E  S  PLVI VVASLIER+MARNHRIA+N  S       
Sbjct: 1   MALPISPRSLRSDVYSYSYEEG-SGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRS 60

Query: 68  GAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHR 127
            A+VF+CR EAPDMSIQCYLERIFRYTK  P VYVVAYVYIDRFCQQNP FRI+LRNVHR
Sbjct: 61  RALVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRISLRNVHR 120

Query: 128 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYC 187
           LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYC
Sbjct: 121 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYC 180

Query: 188 CHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           CHLEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 181 CHLEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 221

[Close]

BLAST of Cucsat.G18060 vs. ExPASy TrEMBL
Match: A0A0A0KAQ9 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G108560 PE=3 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 1.03e-161
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60
           MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS
Sbjct: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of Cucsat.G18060 vs. ExPASy TrEMBL
Match: A0A1S3CAV0 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103498771 PE=3 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 5.04e-153
Identity = 217/226 (96.02%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60
           MA +S+N+IIPISPRKLRSDLYSYS+SEDYSKIPLVISVVASLIERNMARNHRIARNY S
Sbjct: 1   MANSSSNIIIPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYMS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQ YLERIFRYTKAAP VYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLM+FKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of Cucsat.G18060 vs. ExPASy TrEMBL
Match: A0A6J1L2S6 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499317 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 2.10e-121
Identity = 183/224 (81.70%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 8   MIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSS-----K 67
           M +PISPR LRSD+YSYS+ E  S  PLVI VVASLIER+MARNHRIA+N  S       
Sbjct: 1   MALPISPRSLRSDVYSYSYEEG-SGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRS 60

Query: 68  GAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHR 127
            A+VF+CR EAPDMSIQCYLERIFRYTK  P VYVVAYVYIDRFCQQNP FRI+LRNVHR
Sbjct: 61  RALVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRISLRNVHR 120

Query: 128 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYC 187
           LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYC
Sbjct: 121 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYC 180

Query: 188 CHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           CHLEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 181 CHLEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 221

[Close]

BLAST of Cucsat.G18060 vs. ExPASy TrEMBL
Match: A0A6J1DZT6 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111025028 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 1.91e-114
Identity = 178/223 (79.82%), Postives = 196/223 (87.89%), Query Frame = 0


Query: 12  ISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNY-TSSK------GA 71
           ISPRKLRSDLYSYS+ +D S+ PLVI+V++SLIER+MARNHRI++NY T SK       A
Sbjct: 19  ISPRKLRSDLYSYSYGQD-SETPLVITVLSSLIERSMARNHRISKNYCTKSKWASRRHSA 78

Query: 72  VVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHRLL 131
           +VFD   EAPDMSIQ YLERIF YT+A P VYVVAYVYIDRFCQ NP FRITLRNVHRLL
Sbjct: 79  LVFDS-GEAPDMSIQSYLERIFCYTRAGPSVYVVAYVYIDRFCQLNPEFRITLRNVHRLL 138

Query: 132 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCH 191
           ITT+MVASKYVEDMNYRNSY+ARVGGLT KEMNQLE+DFLF+M FKCHVN+SVFESYCCH
Sbjct: 139 ITTIMVASKYVEDMNYRNSYFARVGGLTRKEMNQLELDFLFMMGFKCHVNVSVFESYCCH 198

Query: 192 LEREVSIGGGYHIERTLRCAEELK-SKQNQQTTYINQIARIML 226
           LEREVSIGGGYHIERTLRCAEEL  SKQNQQTT+ NQ+ RIML
Sbjct: 199 LEREVSIGGGYHIERTLRCAEELNNSKQNQQTTF-NQMPRIML 238

[Close]

BLAST of Cucsat.G18060 vs. ExPASy TrEMBL
Match: A0A6P4AKZ5 (Cyclin OS=Ziziphus jujuba OX=326968 GN=LOC107424218 PE=3 SV=1)

HSP 1 Score: 326 bits (836), Expect = 8.91e-111
Identity = 163/227 (71.81%), Postives = 191/227 (84.14%), Query Frame = 0


Query: 5   SNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS---- 64
           S +  + ISPRKLRSDLYSY++ ++ S  PLV++V+ASLIER+MARN RIA+N +S    
Sbjct: 4   STSTSLAISPRKLRSDLYSYAYGQEDSNTPLVVNVLASLIERSMARNQRIAKNCSSLYLS 63

Query: 65  -SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRN 124
                 +FDC  E PDM+IQ YLERIFRYTKA P VYVVAYVYIDRFCQ NP+FRI +RN
Sbjct: 64  RDLRTRIFDCH-ETPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQTNPAFRINIRN 123

Query: 125 VHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFE 184
           VHRLLITT+MVASKYVEDMNYRNSY+ARVGGLTT ++N LE++FLFLM FK HVN+SVFE
Sbjct: 124 VHRLLITTIMVASKYVEDMNYRNSYFARVGGLTTDDLNNLELEFLFLMGFKLHVNVSVFE 183

Query: 185 SYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           SYCCHLEREVSIGGGYHIERTLRCAEE+KSK+N++  Y  QIAR+ML
Sbjct: 184 SYCCHLEREVSIGGGYHIERTLRCAEEIKSKRNEERRYNMQIARVML 229

The following BLAST results are available for this feature:

BLAST of Cucsat.G18060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHD3	4.7e-83	70.00	Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1	[more]
Q9M205	1.4e-79	67.26	Cyclin-U2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-2 PE=1 SV=1	[more]
Q7FAT5	5.1e-45	47.60	Cyclin-P2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP2-1 PE=2 SV=1	[more]
O80513	9.0e-34	45.73	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9LJ45	1.2e-33	41.77	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]

BLAST of Cucsat.G18060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140492.1	2.12e-161	100.00	cyclin-U2-1 [Cucumis sativus] >KGN46558.1 hypothetical protein Csa_004772 [Cucum...	[more]
XP_008459728.2	1.04e-152	96.02	PREDICTED: cyclin-U2-1 [Cucumis melo]	[more]
XP_038875511.1	9.29e-133	87.12	cyclin-U2-1 [Benincasa hispida]	[more]
KAG7013796.1	4.33e-121	81.70	Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006659.1	4.33e-121	81.70	cyclin-U2-2 [Cucurbita maxima]	[more]

BLAST of Cucsat.G18060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAQ9	1.03e-161	100.00	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G108560 PE=3 SV=1	[more]
A0A1S3CAV0	5.04e-153	96.02	Cyclin OS=Cucumis melo OX=3656 GN=LOC103498771 PE=3 SV=1	[more]
A0A6J1L2S6	2.10e-121	81.70	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499317 PE=3 SV=1	[more]
A0A6J1DZT6	1.91e-114	79.82	Cyclin OS=Momordica charantia OX=3673 GN=LOC111025028 PE=3 SV=1	[more]
A0A6P4AKZ5	8.91e-111	71.81	Cyclin OS=Ziziphus jujuba OX=326968 GN=LOC107424218 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 62..170 e-value: 8.4E-32 score: 110.8
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 12..223 e-value: 4.4E-66 score: 220.6
None	No IPR available	GENE3D	1.10.472.10		coord: 26..225 e-value: 4.8E-49 score: 168.8
None	No IPR available	PANTHER	PTHR15615:SF15	CYCLIN-U2-1	coord: 11..225
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 11..225
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 52..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18060.T1	Cucsat.G18060.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0019901	protein kinase binding