Cucsat.G18057 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18057
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	squamosa promoter-binding-like protein 8
Location	ctg3345: 4627851 .. 4631913 (+)
RNA-Seq Expression	Cucsat.G18057
Synteny	Cucsat.G18057

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGGGGGGGAAAAGGTTAAAATGGAAAGCAACGAAGTTAAAAAGATTTTAAACTTTTTTTTTTTTACCACAAGTCGTGTAAATAGTACAAAAACGAAACAAACACACAACTGTGTTTTTTTCTTTCTTTTTGTTTTCTCTTAGCAGAGAGTTTCCACAAACCCAATCGTTTCTCTCAGGTGAGATCTCTACAGCTTCAAAATTATTACTAACTCTTTTTCAATCCTCTTTTTTCTTTTTTATAAAAACTAACCAACGGATAAAATTGGGACAACCCCTCCTCTATATTTTTCTCTCTCACTCTTCAAATGGCAACTTAGGTATTTTTTTTTTTTTTGGGATTTTAGAAGTGATTTTGTTATGTGTGTGTTTTTCTTTAATTATTTCTCCGACATTTCAGGTACTTTCTAAAACTTGAAATCGCTTCTCTTAGAAAGTAGAGCCTCAAAATATATAAGCAAAAAAAAAAAAATGTTGGATTATGAATGGGGATCAACAAACCCACCGCCGATCATCCTCTCCGGAGAAGAATCCGAACCTGTTTTCAACTCCGTCCCATCTCACTCTCACAACTTTCCCACTTTCGTAGACCTCCATCATCACAACACATTTCTTAATCCACCGCCGCCACCGCCACCGTCCACGGCGGCGTTCAGTTCTCACTTAGGCGGATTCTACAACCATCCACAGAGCTACACTATGGGTGCTTCTTCATCTCATCATTATAATAGTGTGACCGGGGGTGGAGGGGAGTTTATGTTGGTGCCGAAGAGTGAGAATGTTTGTGGGAGTATAGGGGCGGCGGCGCCGGCGGAATTTGCGGCGAGGATTGGGTTGAATTTGGGGGGAAGGACGTATTTCTCGTCAGAGGAAGAAGAGTTTGTGAACCGGCTGTACCGTAGGACGAGAACCGGCAGCGAAATGGGTGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCATTACCACCGACGACATAAGGTTTGTGAGTTTCATTCTACAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAGTGCAGCAGGTTCCTTCCTCTCTCTCTTTCTCTTTTGTTGTGAATTTCCTAAGTTACCCCTCTGGTTGTCCTTCTCGACCTCGTTCTGATTATTATTTAATGCGGTTGTCACAATATGAGGTAAACAAATATTAAAACTTTGTTAGTACAACAGCAATGGAGATAGATGATTGGACGTTTCTCTATGCTAAACTCACCCTATAAAAATATAAAATTTTACTTAATCTATAATCATCAAATTATTGTTTGAATTTTGATGCATTTTTCATTAATGTCTACTATGTATATAACATATTTACATACATGGTAGATACAAAATTGTCGTTAGATGCTATATAATCAATTTCATATTCATAAACAAAAACAATTAAAGTCATTGACTAGTGTATATCTAGAAACACGAAATGCAATATAAACGAGATACTAAACAGACTTTTAAGGAGTATGAAGTTGGATGGACGCTCTTTGATGCTTTCATTATAACACAATTGGTTTTTTCAACTATTATAATATATTATGTAATTACATTATCTAACAAGAGTTAACTTAATTGACATTTATATTTACGGAACATAGAAGAAGTTATATGTTCAAATCATTAATAGTGGTGTAATTTAAACTTCTACTGTGTTTATTATTAATTTTTATAATATTTACCATATATAATTATCCTCCATTATTATTTAAATATAGATTAAAATAGTCTACACCATTTTAAATAGATATTATAACAACTATAGTCTCTACCATAACTAAGTAAATACTAAAATAGCCTGTTAATCATAATTTATAATGAATAGGAGGGGAAGAATTTGAATGAGGAAGGAATGAACAACTTATTAAATTTGAAGCCAAGTAAGGGATGTAGATAAGAATATAAATTATTATAGGACATAGGTTATCAATTATTTGAAAGGTTTCACCCACTAGTAACTAAAATTGAATGTTTTTGTTTGCATACATAGTAAGGTGTTTGGAGGGGGCATCCTAAACAAAAGTGTAAATGACGTAAATGCCCTCCAACGAGGCCAATGATTTGGTTAGGTTAGCCATATTCGTGGAGTAAATGTAAATCCCGAGGGTAATTCCGTCCGTGACAACAAAAAGGAAAAAAGGAAAAAAGTGAGTGTAGTTTTGAGGTTTGACGTGTGGGTCTACATGACCCCCTCTCACAAAAGCCCTAGAGCAGCTTTCCTTAGATGGGTGCAAATCTTACTCAAATACCCAAAATACCCCCACCGTTTTCTTTTTCTTATCATCAACACAATCATTGCCCCCTTTCCGTACATTGAGAAAATCTCAAGGGCATTTCCGTCCCTAAATGTCCACAATCCTTTCGAGACTGTCCTTCACTCAACTTGCCATTTTCGTACCACTTTATTTGGTAGATACACACCTTCTTTCATTTATTAACCAAACCTCTTCTCTAAGAATTCCAGTTTGTTGCTTATAATTTAGTTTCTCACCTCTACAAATTTTCATTTTCTGCTTCCTGCCTCAAACCACCTTTTTACAGTTCCATGCTGTGATTCTAATTGCTTTTGAGCTCTTTTTATGTTTATTTGTTGTACTAAAAGAAAAATACAATTTTACTCAACTTACTTAAAACATGGTAAAATTGCTCTTCCTTATTTAAAATTCTGCATGAGTAATACAAGCATGCACACTCTCATCACACACACAAAAGAAGTAAAAATATTTTAAGGAAAAAGCTTGGTGCATCTATTTTTATACATCTAACTAAATTGTCTACTTATATTTTATTATATGACAAAATCTTTTAAATGATTGTGATGAGATGGTAATGCATAAAGAGACTCTATCCAAGAGTGTTGTTAAATATTAAAAAGAAAAAACATGTTTGAAGAGTTTGCATTATAACAAACTAATTAATAGAATGTATAAAAGAATAGTGGTATAGCTCTTATATTTTAGTAGTTATGTCGTTTACATTTACTATATATATATATTTGTAATGAAATATAATATGAGTTTATCTTTTAGGGGTTTTTATTCTTCTGGGCAAGTGTGTGTTTTTGTATTGGTTGTAGGTTTCATGTAGTAGGAGAGTTTGATAATGGAAAACGGAGTTGCCGAAAAAGATTGGCAGATCACAACCGTCGACGGAGAAAGACTCAACAACCTCATCATCAACCAACCCCTAACTCATCGCAACTGATTCAAAGTACCACTTCTTCTCCAACTCATTCTGCTGCCACCAGTAAGTCACGACTAATTCATCACTTCTTTTTTTAATTAGTTGAGTTAGGTTAAATTGAGTTAATACGACATTTATTCAATCCAAAACCCACCACTACTTGATAAAGAAACAAAAAATTTAACCCCAACCTACCCAACTTAAAAACAAGACTATAATCCAATCAAGTCTCTATAGCATGGGTTGTGTAGGTAGTTTGAGTTGTTTAGGTTTTCAGGTCATGGGTTGTGTAGGTAGTTTGAGTTGTTTAGGTTTTCAGGTCATTTGGACGTACACAAAATCTATAAACTCTCTAATCACAAATTATCGTGTAAAATTTATTTTGAAAAAGAAAAACACTTTCTTATTTTGCAATTGAAAAGATGCATTTGATCATGTCATTATAGTTTAAGTCCGATTTTAATTAATGCAATTGAGTTTTTGTAGGATCAACAATGGAGTCAACCGGACAATCAACATGGTCGGTAACTGTGGCAGTGTCTTCTCCAACAAGAATGTCACTAGATTGCCTTAACCAACAACCTTACTAAATCTATAAGATATTCTTCTCAATGACCGTGACAAGAACGCATGACAAAATAATAGAATTTAATTAGGAAATAACATAGAGAAGAATATTATATATGATTGATATGTGTATTTGTGTGTAAACAGTAGTTATTAACTAATTAATCTTCTATATATTAGTTGTAGCTAGATTTTCATTTTCTCCCTTGTGTGTACTAGTATCACAAAGTAGAGTAGTCTTCTTGTCTTTTGGAGTATAATAATTGTAGATTGGAAAAACCTTGACCTTTAAATGGAAAGTTCAATTTGATGCTTTCAAATGTTAAAATTTGAC

Coding sequence (CDS)

ATGTTGGATTATGAATGGGGATCAACAAACCCACCGCCGATCATCCTCTCCGGAGAAGAATCCGAACCTGTTTTCAACTCCGTCCCATCTCACTCTCACAACTTTCCCACTTTCGTAGACCTCCATCATCACAACACATTTCTTAATCCACCGCCGCCACCGCCACCGTCCACGGCGGCGTTCAGTTCTCACTTAGGCGGATTCTACAACCATCCACAGAGCTACACTATGGGTGCTTCTTCATCTCATCATTATAATAGTGTGACCGGGGGTGGAGGGGAGTTTATGTTGGTGCCGAAGAGTGAGAATGTTTGTGGGAGTATAGGGGCGGCGGCGCCGGCGGAATTTGCGGCGAGGATTGGGTTGAATTTGGGGGGAAGGACGTATTTCTCGTCAGAGGAAGAAGAGTTTGTGAACCGGCTGTACCGTAGGACGAGAACCGGCAGCGAAATGGGTGGTTCGGGGAATTGGGCGGTTCGGTGTCAAGCGGAGGGGTGTAATGCGGATCTGAGTCAAGCGAAGCATTACCACCGACGACATAAGGTTTGTGAGTTTCATTCTACAGCTTCCACTGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAACAGTGCAGCAGGTTCCTTCCTCTCTCTCTTTCTCTTTTGTTGTGA

Protein sequence

MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAAFSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRFLPLSLSLLL

Homology

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BLAST of Cucsat.G18057 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 106/244 (43.44%), Postives = 134/244 (54.92%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60
           MLDYEW   NP  I+LSG+E  P  +S P+ S +F  F  + H+N         PP  ++
Sbjct: 1   MLDYEW--DNPSSIVLSGDERNP--DSDPTRS-SFSFFDPISHYNNDHRHITISPPLLSS 60

Query: 61  FSS----HLGGFYNHPQSYTMGASSSHHYNSVTG--------GGGEFMLVPKSENVCGSI 120
           FS+    H    Y    S        HH++S+ G        G  + +  P S     S+
Sbjct: 61  FSNQQQQHHLTLYGQTNSNNQFLHHHHHHHSLYGSTTTTTPYGASDPIYHPHSSAPPASL 120

Query: 121 ----------GAAAPAEF----------AARIGLNLGGRTYFSSEEEEFVNRLYRRTRTG 180
                     G+ +   F          + RIGLNLGGRTYFS+ +++FV+RLYRR+R G
Sbjct: 121 FSYDQTGPGSGSGSSYNFLIPKTEVDFTSNRIGLNLGGRTYFSAADDDFVSRLYRRSRPG 180

Query: 181 SEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 213
                +     RCQAEGCNADLS AKHYHRRHKVCEFHS ASTV+ AGL+QRFCQQCSRF
Sbjct: 181 ESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRF 239

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BLAST of Cucsat.G18057 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 59/96 (61.46%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 117 AARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGS----EMGGSGNWAVRCQAEGCNADLSQ 176
           A RIGLNLG RTYFS  +   V+RL  R+R G       GG+ +   RCQAEGC ADLS 
Sbjct: 133 AGRIGLNLGRRTYFSPGDMLAVDRLLMRSRLGGVFGLGFGGAHHQPPRCQAEGCKADLSG 192

Query: 177 AKHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 209
           AKHYHRRHKVCE+H+ AS V  +G  QRFCQQCSRF
Sbjct: 193 AKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRF 228

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BLAST of Cucsat.G18057 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 59/96 (61.46%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 117 AARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGS----EMGGSGNWAVRCQAEGCNADLSQ 176
           A RIGLNLG RTYFS  +   V+RL  R+R G       GG+ +   RCQAEGC ADLS 
Sbjct: 133 AGRIGLNLGRRTYFSPGDMLAVDRLLMRSRLGGVFGLGFGGAHHQPPRCQAEGCKADLSG 192

Query: 177 AKHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 209
           AKHYHRRHKVCE+H+ AS V  +G  QRFCQQCSRF
Sbjct: 193 AKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRF 228

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BLAST of Cucsat.G18057 vs. ExPASy Swiss-Prot
Match: Q0E3F8 (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21
Identity = 76/171 (44.44%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 54  PPPSTAAFSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAP 113
           PP + AA  S L      P   ++    +   +    GGG F+   K E+  G +     
Sbjct: 93  PPAAAAATPSSL----QMPMMMSLPGLPATAADVYPFGGGGFV---KRED--GPVLDVVG 152

Query: 114 AEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGS---EMG------GSGNWAV----- 173
                RIGLNLG RTYFS  +   V+RL  R+R G    EMG      G G  A      
Sbjct: 153 GGGGGRIGLNLGRRTYFSPADVLAVDRLLLRSRLGGMGMEMGMGMGVLGLGLAAAAHHHQ 212

Query: 174 --RCQAEGCNADLSQAKHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 209
             RCQAEGC ADLS AKHYHRRHKVC+FH+ A+ V+ AG  QRFCQQCSRF
Sbjct: 213 PPRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSRF 254

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BLAST of Cucsat.G18057 vs. ExPASy Swiss-Prot
Match: O04003 (Protein LIGULELESS 1 OS=Zea mays OX=4577 GN=LG1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-18
Identity = 77/187 (41.18%), Postives = 88/187 (47.06%), Query Frame = 0


Query: 42  HHHNTFLNPPPP--------PPPSTAAFSSHLGGFYNHPQSYTMGA--------SSSHHY 101
           HHH TF     P        PPPS A  S +L     +P S+ + A        SSS++ 
Sbjct: 71  HHHTTFAGGHSPHDILHFYTPPPSAA--SHYLAAAAGNPYSHLVSAPGTTFHQTSSSYYP 130

Query: 102 NSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAA-RIGLNLGGRTYFSSEEEEFVNRLYRR 161
            +           P       S      A FAA ++GLNLG RTYF              
Sbjct: 131 PAAAAQAAPEYYFP----TLVSSAEENMASFAATQLGLNLGYRTYFPPR----------- 190

Query: 162 TRTGSEMGG--SGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSTASTVITA-GLTQRF 209
                  GG   G+   RCQAEGC ADLS AK YHRRHKVCE HS A  V+TA GL QRF
Sbjct: 191 -------GGYTYGHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRF 233

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BLAST of Cucsat.G18057 vs. NCBI nr
Match: XP_004140489.1 (squamosa promoter-binding-like protein 8 [Cucumis sativus] >XP_011656869.1 squamosa promoter-binding-like protein 8 [Cucumis sativus] >KGN46565.1 hypothetical protein Csa_005333 [Cucumis sativus])

HSP 1 Score: 433 bits (1114), Expect = 6.53e-152
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60
           MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60

Query: 61  FSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARI 120
           FSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARI
Sbjct: 61  FSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARI 120

Query: 121 GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH 180
           GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH
Sbjct: 121 GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH 180

Query: 181 KVCEFHSTASTVITAGLTQRFCQQCSRF 208
           KVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 KVCEFHSKASTVITAGLTQRFCQQCSRF 208

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BLAST of Cucsat.G18057 vs. NCBI nr
Match: XP_008458127.1 (PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo] >XP_008458128.1 PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo])

HSP 1 Score: 399 bits (1026), Expect = 1.65e-138
Identity = 193/211 (91.47%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPP---S 60
           MLDYEWGSTNPPPIILSGEESEPVFNS PSHSHNFPTF+DLHHHNTF  PPPPPPP   S
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSDPSHSHNFPTFIDLHHHNTFFTPPPPPPPPPPS 60

Query: 61  TAAFSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFA 120
           TAAFSSHLGGFY+HPQSYTMG SS HHYNSVTGGGGEFMLVPKSE+VCGS+  AAP EFA
Sbjct: 61  TAAFSSHLGGFYDHPQSYTMGTSSYHHYNSVTGGGGEFMLVPKSEDVCGSM--AAPVEFA 120

Query: 121 ARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYH 180
           ARIGLNLGGRTYFSSEEEEFVNRLYR+TR+GSEMGGSGNWAVRCQAEGCNADLSQAKHYH
Sbjct: 121 ARIGLNLGGRTYFSSEEEEFVNRLYRKTRSGSEMGGSGNWAVRCQAEGCNADLSQAKHYH 180

Query: 181 RRHKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           RRHKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 RRHKVCEFHSKASTVITAGLTQRFCQQCSRF 209

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BLAST of Cucsat.G18057 vs. NCBI nr
Match: XP_038906757.1 (squamosa promoter-binding-like protein 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 364 bits (935), Expect = 9.85e-125
Identity = 179/209 (85.65%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPP-STA 60
           MLDYEWGSTN PPIILSGEES+PVFNS P+HSHNF TF+D H+HNTFL PPPPPPP STA
Sbjct: 1   MLDYEWGSTNAPPIILSGEESDPVFNSDPTHSHNFSTFLD-HNHNTFLPPPPPPPPPSTA 60

Query: 61  AFSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAAR 120
           AFSSH G FY+HP SYTMG  S HHY++V GGGGEF++V KSE VCGS+ AAAP EFAAR
Sbjct: 61  AFSSHFGSFYDHPHSYTMGPPS-HHYDTVAGGGGEFVVVTKSEEVCGSMAAAAPVEFAAR 120

Query: 121 IGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRR 180
           IGLNLGGRTYFSSEEEEFVNRLYRRTRTG EM GSGNWAVRCQAEGCNADLSQAKHYHRR
Sbjct: 121 IGLNLGGRTYFSSEEEEFVNRLYRRTRTGGEMAGSGNWAVRCQAEGCNADLSQAKHYHRR 180

Query: 181 HKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           HKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 HKVCEFHSKASTVITAGLTQRFCQQCSRF 207

[Close]

BLAST of Cucsat.G18057 vs. NCBI nr
Match: XP_038906755.1 (squamosa promoter-binding-like protein 8 isoform X1 [Benincasa hispida])

HSP 1 Score: 364 bits (935), Expect = 1.21e-124
Identity = 179/209 (85.65%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPP-STA 60
           MLDYEWGSTN PPIILSGEES+PVFNS P+HSHNF TF+D H+HNTFL PPPPPPP STA
Sbjct: 1   MLDYEWGSTNAPPIILSGEESDPVFNSDPTHSHNFSTFLD-HNHNTFLPPPPPPPPPSTA 60

Query: 61  AFSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAAR 120
           AFSSH G FY+HP SYTMG  S HHY++V GGGGEF++V KSE VCGS+ AAAP EFAAR
Sbjct: 61  AFSSHFGSFYDHPHSYTMGPPS-HHYDTVAGGGGEFVVVTKSEEVCGSMAAAAPVEFAAR 120

Query: 121 IGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRR 180
           IGLNLGGRTYFSSEEEEFVNRLYRRTRTG EM GSGNWAVRCQAEGCNADLSQAKHYHRR
Sbjct: 121 IGLNLGGRTYFSSEEEEFVNRLYRRTRTGGEMAGSGNWAVRCQAEGCNADLSQAKHYHRR 180

Query: 181 HKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           HKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 HKVCEFHSKASTVITAGLTQRFCQQCSRF 207

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BLAST of Cucsat.G18057 vs. NCBI nr
Match: XP_023513854.1 (squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo] >XP_023513855.1 squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298 bits (763), Expect = 1.00e-98
Identity = 152/215 (70.70%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60
           ML+YEWGSTN PPI+L G+ESEP FN    HSH+ PTF+D HHHNTFL    PPP     
Sbjct: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFIDHHHHNTFLPTLTPPP----- 60

Query: 61  FSSHLGGFYNHPQSYTMGASSSHHYNSVTG-------GGGEFMLVPKSENVCGSIGAAAP 120
           F++H GGF +HP S+ MG S  HHY++V         GGGEF++VPKSE VC SI  A P
Sbjct: 61  FTTHFGGFDDHPHSFIMGPS--HHYDTVVDAVHGGGVGGGEFVVVPKSEEVCRSI-TAVP 120

Query: 121 AEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQA 180
            +FAARIGLNLGGRTYFSSEEEEFVN+LYRR RTG E G SGNW+ RCQAEGCNADLSQA
Sbjct: 121 VDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPG-SGNWSARCQAEGCNADLSQA 180

Query: 181 KHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           K YHRRHKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 KQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRF 206

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BLAST of Cucsat.G18057 vs. ExPASy TrEMBL
Match: A0A0A0KA35 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109120 PE=4 SV=1)

HSP 1 Score: 433 bits (1114), Expect = 3.16e-152
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60
           MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60

Query: 61  FSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARI 120
           FSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARI
Sbjct: 61  FSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFAARI 120

Query: 121 GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH 180
           GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH
Sbjct: 121 GLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRH 180

Query: 181 KVCEFHSTASTVITAGLTQRFCQQCSRF 208
           KVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 KVCEFHSKASTVITAGLTQRFCQQCSRF 208

[Close]

BLAST of Cucsat.G18057 vs. ExPASy TrEMBL
Match: A0A1S3C8D3 (squamosa promoter-binding-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103497656 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 7.98e-139
Identity = 193/211 (91.47%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPP---S 60
           MLDYEWGSTNPPPIILSGEESEPVFNS PSHSHNFPTF+DLHHHNTF  PPPPPPP   S
Sbjct: 1   MLDYEWGSTNPPPIILSGEESEPVFNSDPSHSHNFPTFIDLHHHNTFFTPPPPPPPPPPS 60

Query: 61  TAAFSSHLGGFYNHPQSYTMGASSSHHYNSVTGGGGEFMLVPKSENVCGSIGAAAPAEFA 120
           TAAFSSHLGGFY+HPQSYTMG SS HHYNSVTGGGGEFMLVPKSE+VCGS+  AAP EFA
Sbjct: 61  TAAFSSHLGGFYDHPQSYTMGTSSYHHYNSVTGGGGEFMLVPKSEDVCGSM--AAPVEFA 120

Query: 121 ARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYH 180
           ARIGLNLGGRTYFSSEEEEFVNRLYR+TR+GSEMGGSGNWAVRCQAEGCNADLSQAKHYH
Sbjct: 121 ARIGLNLGGRTYFSSEEEEFVNRLYRKTRSGSEMGGSGNWAVRCQAEGCNADLSQAKHYH 180

Query: 181 RRHKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           RRHKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 RRHKVCEFHSKASTVITAGLTQRFCQQCSRF 209

[Close]

BLAST of Cucsat.G18057 vs. ExPASy TrEMBL
Match: A0A6J1KHB5 (squamosa promoter-binding-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111494369 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 5.17e-99
Identity = 154/215 (71.63%), Postives = 170/215 (79.07%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60
           ML+YEWGSTNPPPI+L G+ESEP FN    HSH+ PTF+D HHHNTFL    PPP     
Sbjct: 1   MLEYEWGSTNPPPILLPGDESEPAFNPEAPHSHHLPTFIDHHHHNTFLPTLTPPP----- 60

Query: 61  FSSHLGGFYNHPQSYTMGASSSHHYNS----VTGGG---GEFMLVPKSENVCGSIGAAAP 120
           FS+H  GF +HP S+ MG S  HHY++    V GGG   GE+++VPKSE VC SI AA P
Sbjct: 61  FSTHFAGFDDHPHSFIMGPS--HHYDTMVDAVHGGGVVGGEYVVVPKSEEVCRSI-AAVP 120

Query: 121 AEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQA 180
            +FAARIGLNLGGRTYFSSEEEEFVN+LYRR RTG E G SGNW+ RCQAEGCNADLSQA
Sbjct: 121 VDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPG-SGNWSARCQAEGCNADLSQA 180

Query: 181 KHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           K YHRRHKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 KQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRF 206

[Close]

BLAST of Cucsat.G18057 vs. ExPASy TrEMBL
Match: A0A6J1HM09 (squamosa promoter-binding-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111464198 PE=4 SV=1)

HSP 1 Score: 293 bits (751), Expect = 3.33e-97
Identity = 150/215 (69.77%), Postives = 166/215 (77.21%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHHNTFLNPPPPPPPSTAA 60
           ML+YEWGSTN PPI+L G+ESEP FN    HSH+ PTF+D HHHNTF     PPP     
Sbjct: 1   MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFIDHHHHNTFFPTLTPPP----- 60

Query: 61  FSSHLGGFYNHPQSYTMGASSSHHYNSVTG-------GGGEFMLVPKSENVCGSIGAAAP 120
           F++H GGF +HP S+ MG S  HHY++V         GG EF++VPKSE VC SI  A P
Sbjct: 61  FTTHFGGFDDHPHSFIMGPS--HHYDTVADAVHGGGVGGEEFVVVPKSEEVCRSI-TAVP 120

Query: 121 AEFAARIGLNLGGRTYFSSEEEEFVNRLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQA 180
            +FAARIGLNLGGRTYFSSEEEEFVN+LYRR RTG E G SGNW+ RCQAEGCNADLSQA
Sbjct: 121 VDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPG-SGNWSARCQAEGCNADLSQA 180

Query: 181 KHYHRRHKVCEFHSTASTVITAGLTQRFCQQCSRF 208
           K YHRRHKVCEFHS ASTVITAGLTQRFCQQCSRF
Sbjct: 181 KQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRF 206

[Close]

BLAST of Cucsat.G18057 vs. ExPASy TrEMBL
Match: A0A6P4A7A0 (squamosa promoter-binding-like protein 8 OS=Ziziphus jujuba OX=326968 GN=LOC107424208 PE=4 SV=1)

HSP 1 Score: 189 bits (480), Expect = 7.59e-57
Identity = 126/248 (50.81%), Postives = 145/248 (58.47%), Query Frame = 0


Query: 1   MLDYEWGSTNPPPIILSGEESEPVFNSVPSHSHNFPTFVDLHHH--------NTFLNPPP 60
           ML+YEWG  NP  I+LS +E EP   S P   HN      L H+        ++FL PP 
Sbjct: 1   MLEYEWG--NPSSIMLSADEHEPASGSDPIRHHNI-----LEHYANAQNAFSDSFLPPPQ 60

Query: 61  PPPPSTAAFSSHL-----------GGFYNH-----------PQSYTMGAS-------SSH 120
                TA+F+ H            G  +NH           P++Y   +S       S  
Sbjct: 61  HSNNPTASFAHHFNPHQVQVSQGQGHHHNHNHNHHALSLYDPRAYAATSSYAPPQPLSML 120

Query: 121 HYNSVTGGGGE----FMLVPKSENVCGSIGAAAPAEFAARIGLNLGGRTYFSSEEEEFVN 180
             +SVTGGGG     FMLVPKSE VC       P +FA+RIGLNLGGRTYFSSE++ F+N
Sbjct: 121 SLDSVTGGGGHGGQAFMLVPKSEEVC------RPVDFASRIGLNLGGRTYFSSEDD-FMN 180

Query: 181 RLYRRTRTGSEMGGSGNWAVRCQAEGCNADLSQAKHYHRRHKVCEFHSTASTVITAGLTQ 207
           RLYRR R      GS N + RCQAEGCNADLS AKHYHRRHKVCEFHS ASTVI AGLTQ
Sbjct: 181 RLYRRQRPVEP--GSSN-SPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVIAAGLTQ 231

The following BLAST results are available for this feature:

BLAST of Cucsat.G18057 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXL3	1.3e-37	43.44	Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8...	[more]
A2YFT9	1.2e-24	61.46	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946...	[more]
Q0DAE8	1.2e-24	61.46	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q0E3F8	1.7e-21	44.44	Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=3994...	[more]
O04003	3.0e-18	41.18	Protein LIGULELESS 1 OS=Zea mays OX=4577 GN=LG1 PE=2 SV=1	[more]

BLAST of Cucsat.G18057 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140489.1	6.53e-152	99.52	squamosa promoter-binding-like protein 8 [Cucumis sativus] >XP_011656869.1 squam...	[more]
XP_008458127.1	1.65e-138	91.47	PREDICTED: squamosa promoter-binding-like protein 8 [Cucumis melo] >XP_008458128...	[more]
XP_038906757.1	9.85e-125	85.65	squamosa promoter-binding-like protein 8 isoform X2 [Benincasa hispida]	[more]
XP_038906755.1	1.21e-124	85.65	squamosa promoter-binding-like protein 8 isoform X1 [Benincasa hispida]	[more]
XP_023513854.1	1.00e-98	70.70	squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo] >XP_023513...	[more]

BLAST of Cucsat.G18057 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA35	3.16e-152	99.52	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109120 PE...	[more]
A0A1S3C8D3	7.98e-139	91.47	squamosa promoter-binding-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103497656...	[more]
A0A6J1KHB5	5.17e-99	71.63	squamosa promoter-binding-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HM09	3.33e-97	69.77	squamosa promoter-binding-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6P4A7A0	7.59e-57	50.81	squamosa promoter-binding-like protein 8 OS=Ziziphus jujuba OX=326968 GN=LOC1074...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 152..222 e-value: 9.1E-32 score: 111.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 159..238
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 161..234 e-value: 3.2E-30 score: 104.2
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 158..235 score: 31.171217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..263
None	No IPR available	PANTHER	PTHR31251:SF75	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8	coord: 110..260
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 110..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18057.T2	Cucsat.G18057.T2	mRNA
Cucsat.G18057.T5	Cucsat.G18057.T5	mRNA
Cucsat.G18057.T1	Cucsat.G18057.T1	mRNA
Cucsat.G18057.T4	Cucsat.G18057.T4	mRNA
Cucsat.G18057.T8	Cucsat.G18057.T8	mRNA
Cucsat.G18057.T7	Cucsat.G18057.T7	mRNA
Cucsat.G18057.T3	Cucsat.G18057.T3	mRNA
Cucsat.G18057.T6	Cucsat.G18057.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding