Cucsat.G18055 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18055
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	vesicle-associated protein 1-3
Location	ctg3345: 4560946 .. 4571693 (+)
RNA-Seq Expression	Cucsat.G18055
Synteny	Cucsat.G18055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAAGAGATTTCAATTAATAAAATAATACGTTTTGCCATAGTGAGGGATTAAGGCAAGTTGAAGAGGTTGAAAAGTACCTTAGCAAGTTCAATAAAACTCATGAGAAAGAAAATTGAGTTAGCATAGAATCGGGAGGAATTACTCCAATTTACGATAGTGAGAATTGAGCTTTAAACAGCCGTGAGAGGATTGGGGTACTTGAGTTGTAAGTTTTTAGCATCGTTTTAGTAAAGGTTTCAATTATAAGTTGTTCTGTTCATGAGGAAAAAAAAGAATTAGTAAATGAAGAAATTAAAATAATTAAAAATACATTCCTTTTTAAAAAGATAATCATTAAAAGAAGGAATATATCGCCATTATGAAGGAAAGAAAAAAAAAAGAAAAAAAAGAGTGTTAAAATTCAATTTTGTTTCTCTCTTTTTAAAACCCCAAAAAGATAATCAATAACATGAAAATCAGTTTCGTGTCTGTTGCTGCTTCCGAAATTTCTCTGGTCCCTCATTTTGTTTTTGGGAATTTATAGATCCATGATAATTTTTTCATTATTCTGATCGAGTGTTTGGTTAGATTTTCAAATCTGCTGGGATCAAGGGCGACAAAAATGAATACTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCCCATGTGAGTATATCCTCCTTTCCCACTTTCCCCCCTCCTCCTTTTTGTTTCTTCCCAACTTTCTCCTTTTCTTCTCTCCAAAATCTCCTCAAAATGGCAAATTGTTTCTTTTTATGACTTTTTGCACTTGTATAATTGATGAATCCTTTGATGGGAACATTTTTCTTTTCTGGGTTTTCGTCTTTGATTCCTTTCCTCCCTTTATTCTTCAATTTTTACCCTTCTTTTGTTTGTGATCATCATGTTTTGACCTCTTTGGACGTTGAAAAGCATTTTTGGATGATGGGTTTTCGATTTTTTATTTTTTATTTTTTATTCAGTAATCCTTCAATGTTATGATTCTCCATAGTTGTGTAAGGATAGGATGTTGTCAAAGGAATGACCTGACCGTCTATGTTTAGTTGAGATGTGAAGGGTAATTTTTTTTTTTTTTTAGTAAAGAAGAAACGGTTTCATCAAAGAGGGTTGGATTGTTGTTAATCACGAATTGCAAACACAAATTGTTGTTCTTAGAAGCAATTGTTTAATATTAGTAATCTGTCTCTACTTTAAGTTTGATCATGACTGCATTTTTTGTCTAATTCTGATTTATGGATGTTTGCTATGTCCTCTTATTTGTGTGTGTTTTCGTTTCTTTCACTTCTGTAAAAATGTAAAAACTTTGCTCGGTGGGTACTTTTCATGTGATGGAATAGTTGAATTGAGGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTATGCCTTTTTCTGTTCAGTCTTGGTATGTTAGTTTGGTTTAATCTCGACGGCTATAACTCGGCAACGTACAATTTTTGAGTTCAGTCATCCTAATTTAACAGGTCAAAACCACCAATCCTAAGAAGTACTGCGTTCGTCCTAATGCTGGAATTATTTTGCCTAGTAGTGCAAGCAATATTACAGGTAAAGCCGTCTGCGGAAATAGTTAATTCGTTTTTCTCTATTTATGTAAAAATTATAAACCACACCTTGATTTTCAACTTCATGGTATCCTATCTACTAGATTAGCCTACGTGTTTTATTTTTCTTTTCATTTCTACTTTTGAATGATGCATATTTGATTTGCTGTTGGACTTTTTAGTTACCATGCAAGCTCCTAAGGAGGCACCTCCTGATATGCAATGCAAGGATAAGTTCTTAATTCAAAGTGTTGTAGCACCAGATGGTACAACATCGAAGGACATTAGTGCAGAATTGGTGGGAATGTCTTGTTGCTTCTTCCTTTTGTTATGTAATTTTTTTTATCAATAAAGATGTTATATTGTTGCTTATGTTTTGCATCTATGAAGTGTAGTTTAACAAGGGAGATGGTAAGGTAGTTGATGAGTTTAAGATGAGGGTTGTTTACATTTTTGCAAATCCTCCTTCGCCTGTCCCAGAAGGATCTGAAGAAGGATCTCCTCCAAGGACCACTGGAGTTGATGATGGAAGCCAAAATTTTGCTTTATTTGATGCCGTAAATTTCTTCCTAGAATTCTTTTCTAGATTGTTATTCTTATCCTTTCTTTTTTATCTATGATTGGAGACCAAGAAGTTGCTTTTTCATATTTTAATGGAATTTATTGTTAAACTTCAGGTTTCAAGATCTCTGGAGGAGCCTAAAGAGAAATCATCACAGGTAAGATATTCTTCTCTTGATTCTTATATAAACTTCAGTTTCCATGTATGAGTGTTTCATCTGCTTTATCACTTGAATAAGCTCTCTTTTTTTTATTTAGTTCTTTTACTTTGCACAATATTAAAAATTTTCGGTAACCTTGAAACTTGAATCGAATTTTTCTGACCACTCTTCAAAATGTTCTCTTTTCATTGTTTCTGTGTCCCATTCTAAGTTATATTAATGCCAATTGCCAATGAAGAGCCTGTGCAAAATGCATGGGAATGTGATTTACATTTACTTATGAAGGATTATTAATTCAAGTTGGATGTAGAACAGAAAGAACGGCGAGATATTCTCCTGAATGACCCAATGCGTGGATAAAATACTTTAACTAGAATTAAGGAAAAAATTATGTAGCTACGAACTACAAAATTTTGGGTAGAGCTAGACATAATAGGTGTGAATCTATCTGGGCACTTCCCTCCCTGTTTTCCCCTTTTCCATCATGAAAGAAGGGTAACATTTTCAATGTCTGGAACTTGTTATCCATATAATTGTTCAGAGGAAATTAGCAACTGTAAGGTATGTAATCATTGTTCTTTGGTCTTATGATTATTGGGTTTTTTTTTCAAGTGTGTGATCTTCCGAAGAGAACTTCTAAACAATGTGAAATTACCTTTTTCATTGTGATGGGGTTTGGGTGGGGCTGCGGGTGGGGGCCATTGAGCTATGACTTTATGGTTCTTTTTGTGTTTTTTAGATGTGCTGTGTCACAAGGAACTGTCCTATCCAATTTTGTGTATGTGTCTGTTTTCCTTGCCCAGAAAATAATGCAGGGTATAATATATGGTTGACTACCCTATCCCTTTTCCTGCCAAGCTTTGAATATTTTATCCCCAATTGGGATTATTTGGGGCTATGAGAGCTATTGTTGTTGAGTTTAAAGTTTAACAGTCATGATTAATCTTAAAATGAACACGATGGAGATCTTTGCTATATGTTTGGAAACTTTAGAAGCTTTCAGTTGACTTCCTACCAGAATCTTGAAATGTATAAATCATCACAAAGAAAATTTGTAGATAGGCTTGAAAAAATGTGCAATGAAAATAGCACTCCAGTACTTCGTTAGGAGATTTGGCCATGTCTTGAAGAGCAGAATCTAGTACTTCCTTGAGAGATTTGGCTATGTCTTTGAAGATTCTTGCATCTTTTTCATTCCAAAATTTTCATGAATTCATTGGGTGTACCACTGAATTTATTGATGAGATATTATTTGTTATTTCACTCATTTGGGAGCTGTAGCATGTATCTGAAGGGGGCAGCACAATGTGTTTCTGGATAAGTGAATGTTGAAGCTTTTTCTTAGCATTATTTTGGAAAGTAGTGTTCGACAATTTTGATACTTCACGATGAAAATATTAATGCAGGCATGGTCTAACGTTTCTAAGTTGACTGAGGAGAAAGATGCTGCTTTACTAAAGAATCATAAACTACGCCAGGAGCTGGTAATTTCTTTTTAGAATTGCATGTTATTTTCTTTACCTCTAAGCTTCGTGTATCCTACATACTCTGCTTTGATCTATTTCTATAATTGTTTTTGTTTGGGAGGAAGATTTTCTGTGGAAGTAAGAAAATGTGGGAGGATAGTATGTTATATTTGGGTGAATTATGTTGAGGCTATGAGTGAGACTTTTATTGAAATGTTCATTTTATCATCAACACGTTGGCCATGATGATTGGCTAGAGATTTTTGGACAGATCTTGTGGAAATGAACTTTTACAAGTACTACAATCTCTCAATCAAGAATGATCAATTATCTTTTTTATTTTGACACAATAATGCAGAAAATACTATGATGCTTTCTCTTGAATGTAGATTTTTTATTCGAGGGTCGCCGAGCTTAGTCTCAAATAAAGGAAAGAGTTGAATCTTGTGAAGAGATGATCAATTCTTGAAGTCTTCTAGTCTTTGTATTCTTCAAGTCTTCATAAATTTTCAAAGCTATATAGTCTTCAATCACTTGGGAGTTTTCTCTCAAGTCTAGAATTTTGGGTGCAAAAAATGAAGGGTGATCTCCAATATGTATGATCTTTACATGGGCTTGGTTGATATTGGACTCAATCTCTCAGTTTGGACTCATTTGAGCCTGACCCTTTTATATCAGATATATAAGCTGTATGGATCCTAAGGAATCATAAAATCTCCTCGTTTTGTAGTTTTTCTATGGAGTTCATTCTTTTTGTTTTCCTTTTTTCCTTTATACTTAAGGTTCTTTTTTAATAAACTCCAATTGGTGGAAATATTTAGAATCCCTTTGGGTTTATTGGGTTGCTTCCTTGTTACCCTTTGCATTTTTGGGGTTTCTCGATGAAAGTTACTTTTCCAGAAAAAGGCAATCCATCTTATTTTGCTTGGTTATGAGGTTACCTTAAAAAGGACCTAACTATCTTACCATTTACAATCATTTTGCTTAAGATTTCAAAACACAAGCAAATGGATTTAACATGTCTCAAACACGTGTTTCATGTTTACTAATAGTTTTTATCAGGTTTAAATTGTGTCATCAAGTGTGGTATCTTACACATGTATACCAGATTTTCAAGTTTTATAGTACGTTGGGTTAATAAATTGGCAACTCCTTCACGTTACACATCTGTAATTCTGCAATATGTTGTGGTGCATATTTCGTTATGGTTGATATTTACTTCTTATTTTTTACCATCCAATCTGTTTTCCTGGCTTACGATGAAACTTGCAGTTGATCGATATCTGCAAGTGAATCTATCTTTGTGTATATGCTTTTTCTCACTTTTCAACAAGTGTCTGGACTTGCTAAACAAAATCAGCTAATGTTAATCTTAGCTCGTTGCTCAAGTTATGCTTTTTTTTTTTTTATATTTTCTTGCAGGAACTTCTGAGGAAAGAAGCAAGCGGAAGGCAGGGTGGCGGTTTCTCTGTATTGTTTGTGGTGCTAGTCGGTCTCATTGGAGTTCTGATTGGTTACTTGGTGAAGAAAACATAGAAAACTCAGACATTCCATTTTTTTTAAATTTTGTTTGATGCATTTTGCTGTTATTATCTGTGTTCTGTCCAGAATTAACAACCTTAAAATGTTTAGCGCATCAAGAAGACAGCTTTTGATGTCTTGTCATTGTTCTAGATTGACCCTGGATTGTTTTTTGAGAAATACTTGTTCAATGGATTCGTTTTAGCTGCTTGCTTGCTCTCTTGGTTCATCTATCTCCTTTCCATTGTGCTTTTGGTTTGTTTGATGTGCAACTTAAAGTGCTGTTTCATCTCTTCCAAATCACATCTTGTGCAACCATGTCGATGTTATTGTCCATGCGTGTTTAGGAAAATCACTTCGTTTCTGAATTTTAAGTAATCGGTTTGTTTGGTCCATAAAGTTTCAATTTGGTCCTTTTAATCTCATCCTTCTGAAAAGTAAGTTTAAATAAATTTTTAATCCTTTTAACTAACACCACATCCTCCCCTCTCTTAGTATTCTTCCTCTTCATTTCTCTGTTATTAATCTTGTCGTCGTTGTACGGTTGCTCATCTTCTTTCTTACTCATTTCATCAACCATCTCCCTCTCTTGTATTTCTTGTTGGACAATTCGACAACCGCATAATCCATTCAATGTCTAAAACATTCTTCTCCTTTGTAAATACAATGATTTCATTATTGCCTCCCAAGAAAAGCTAAAATAAACTTTGGAATGGTTCGTGAATAATATACAACAATCCCTCTATATCTACGTTGTGTCGGTTCAACAGACAACTAAACTAATTCAGAATCTTAATAAAAATTATATGTATTTAATTCAGTTTTTCTTTTCCTATTTAGATTAGATAGAATGTATGGTTTTTTCTTTAGTTAAAAGAGCAATAGTTTTATTTTCAGAATAATGGCCAAACAAACTTGTAATTTACTAATAATAGTAAAACTAAGCTAGTTTCAGCACCACGGTTGTAGCAGCGGCAGAGTTGGTGGTGGTAGTGATGGCATCAGTACTGAAAGCCTCGAGTCAGCACGGCTCCTGGTACAAATACAAATGCCGGCCTTACGTTCATTTTCATGTACTAACTGATATGTTTTGAAGCAATAGAGTTACTTGCCCTCTCATACAAATGGCCTGCCATGGTGCCCCAAGTTGGTGACCTTTCAAGAATTTGACTCTTTTGTAATGACTTGTTTTAAATTATTTTTTGGGCACACTCCACGTAAGTTACTCCAACCTAAACACGATTTACTATGGTTGAAATTTGGTAAACAATACTAATGTTTTTATGGAAAAGTTGAAGCAGCTTTTAAGTTTGAAAATTGTGTTTGGAAATGTAGATTTTAAAGGCATGAGTTAGGTTGTCTCACACAATATTACATTGCTTTGACCCATTCTTATATGTTCTCTTAATATGTATTTTTAAATAATATTTTATTTTAATACTGTAAATTAAGTTTTTTTCCTTCTAATTTTGAAGCTCTTTGCTGATTTTATTTTTTCTTAAGAAAATATTTACTTTCAAATTATGATTAACTATAAGTTTTTGCTTAACGTGTATTGGATAAATTTTTGTAATCTAGGGTTTGTTTGAGTTTTACCATTACTTTAATGCCATTTCTTTTCTTTTAAATGTTGTCTAAGACAAAAGGAAATATGGTTAAACTAAACTTCATACTTGATTACTTTAATGGTTGATTGTTTAACTTCTTACCTTTTTATGTTTTACTTTTAACTATTAAACTCTATTTTGTCCTTCATATATATATTTTTAATTATCATAGCTAAGATCTATTCCAAAGTTTTAAAGAACATTTTATATAATTTTAACTAATTAAAATATGATCTCTTGGAATTTTAAAAAATAATCAACATAACCCAAACAAATGTTTAAATACTGAGAAAAGAAAGGTACTTTTTTCTCCCACGACACGTCACGGGTGAAATAATATTATTTTTAAAATGATGAAAAAAAGTTAAAATCTAAAATATGAAATTTGATGAAATTAAAAACAAAAAAAGAGTCGGGAAATTCCATGAAATGTAATCTAAATAATTAATAATTGATGGGAACATGTGCATGTGAAGGGATGGTTGATCAACAAAACTAGACAATCGATCCAAATTAGAAATGGATGGATGTATTACAGTAGTTGTAATTGTATTATTACAACTCTCAAATTTATACAAGTGTTAATGTAATTAAACTCTCGAATATACAATTATTTGGCCATTAGAATGACTTGTGTTTTTACTCTTCAAAATTTAAATTAATGGTATTAAAAACTTTTGTTTATTCAACAAATTTGACGCTATTTTCTTCAAATATTACTTTAGATTTGATGTTAAATCATTTCGGTGAGTTGTTTTATCTATAAAATCTAAAAGTAGCCGATCATATATTCTAAATTTGATCATTCTTCCAGCAACCAAGCTGGAAAAGTTTGGAATTAATAAATTCCCAAGTTTTTAAATTTGTATAGATTTGTTCAATCAACCAATATTAAATAAAAATTAACTTATTTATAAATAATTACACTTTATTATCGTTCAACTTGAATTCTTGACCATTAATGTGAACAGTTTTCAAATTATTTAACAAATAATCCAGAGTCTATTATGCAACTTTTATATCATATGTGAATACAGTTTCATTTTCTATCTTTTATTTAATTAAATTTGTTACGGACTTATGAATTAAATTGTCAAATATTGTTTAACTAAGCCATATAATTCTTTCCTAAAAAGAAATAAATATACATTTTTTTGTATTGTACCATATCTATAAATATGTGAAGACTAATTGATTTCATTTTAGAAAAAAGATTTTATTAATTCTGGTAAAAGAAAATAGAAAATAGAAACGGCCTATGTATATTTATATTGTAAGCTATAGTAAAGAATGATTTAAATTAAATAGATAGTGTATGAATATGGTGAAAGATGTTAGGTTTTAAATAGAATATAATACATAGGTATAGTGATATAACATTTGATGGGTCTAAACTTTGGGAATAAGTTATTAGCACACCATAGAAAATAGAAAATAGAAAATAGAAAATAAAGTTGGTTATTTATTTTCTCTATAAAATTGGTTATATAATAAAAGGAAAATGGAAAAGAAAATAGGTGGAAACTTTGAACATTAGCTGAGTCATCCCGTGATCATCATCATCATCATCCCATCTTATCTCATTTCCAATAAAAACACTCTACGTTTCCAATTCATCTCCCTCAAATCGACACACAATCTTTTGACAATTTCAATACTTTTACAAATCCCATTTCCGATCTTTTCTCCCTAATTTTCCCTTTCATTTTTGCTTTCCTCGCCTGAGAGTTCACAGCTGATCTCCTCTTTCCCCGCCGTCGACTCTCTGGTTTGTATTTCCTTACCCATGATCCTAATTTTTCTTTGATCTCAGTTGTTTTCACGTTTCTTTTCTTCTTATCCAACCGGCGATTAGCTAATTGACTAAATTCGTGGATTATTGCCTTGATCGATTACTTTTTGGAGATATTGTGTGTTCTTTTTCTTTGTTTTTATTTATGTTCTATGCTTGAGTTGCCAAATTAGTGGTCTGTCGTGTTGATTATTGTCTTAAAATTTATGATTTTTGTTTCGGTTATTGATAGGGATGGTAGATTTTGACCGGGTTTACTTTGATTGAGCTGAATCGTCTTTTATTGGTTTTGTGACGAATGTTATATCGATTACGACTGATTGTTGGTTCAATCACTTTTTCTCAGTTTTTTTGTGAGTAATGTCTACGAGCTCGTTCAAGCAAGAGCATGAGTTTGGTATATTCTGGAGCTTTCTATGGAATCCTGTTATTTTTATAATCTCTTTTTCAAATCAAAATCATATTTGTTTTGTTCTTTTTTTTTTTTTTTTTTTTTTGCAGAAAAGAGACATGCTGAGGCAGCCCGGATTAGAGAAAAATACCCAGACAGAATTCCGGTAAGATTTATGACTTTTCTTGTTTGTTATTCTGTATTCAATTTTGGTTTTCTTCATTTTTGTGTACTGAATTTGGGATTGATTGACCTTAACTGCGTAATCTTTTAGTATGTATGATTGTATGCTTGAGTGTTTATGTGAATGTGTACTATGTCAAATGGGATTTTTCTCAACAGAACAAATAATTTCATGATTACTATTAATGGCTTATTGATTCTCATTTCTCATCTATTCTTGGTATATTCCATTTATGAACAATATTAACTTGGCATCTCTTGATATCTTATCACAAAAGCTTAATATCTGTCTGCATTTGGAAAAAAGATCTTTGTAATACATAAATTTTGGTTGTAAAGTAGATATTGTGTCTTGGTAACTATGCCTGTCTCCACTTGTTGAGCAGGCATGTTTAGATGCTTTATAAATAACACCTTGTCACAGAAAATTTTCATTGATGGTGTCAGCTTTAAAAGATTTGCATTCCTATCTTTCACCTAGTGAATTATTATGTTTTTTTTTTTTCTTCTTGTTCACCAAGTTTGTTCAAATATGAGAAAAGAGTTGACTCAGAAAATAGTGAAATGGGATCCAATTATGCTAGGTCCTCCTTTCCTTTCTCTAAATTCCTGTTTACTTTACTGTTATTATTACTACTATGATAAAACCAACCATTTGTTGAGAAACATGAAGGATTATAGAAAAGCTTTAAAAAACAGCCCAATATGGAAGGCAAACAACAACAGACCTGGCAAAAGGAAAAGAAAAGGGTCCTATCTAAAAGAATAAAAGCTGAAGGATAATTATAAGAGTCCCTAGTTTTAGAAGCTCAAAGAGAGGGATTTCAGGTGGGCATTGGCAAGGGCCCCATCTTTTTCCACGATCTCTCAAACCCTCTGAAAATCGATGTGGTGGTGCAGAGTGCATAGACCCAAAATCAATGTTGAATTGTGGATTTGGGACCATGAGAGAACACTTCTTTCTTGTAATTTCTATTATGTGTCGATGCCTATCAAAATGTTCATCATATAAACAGTACTACTACACTCTCTCATGCTGTTTATGGATCCATTATTTGATTTTCAAATCTTTCTTTTGTCATTATGGTTCATGTTTTCTTCTCATTATTATCATTCTCTTTTGTGTTGATTAGGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAGAAAAAGTAAGAAGAGTTTCTTTTAGCAATCTTACATTAGTTTCTTTCTTCTTCTCATTTTCTTGCAGTGCAATTGCAACAAGGTTTGATTGTATCTTGGCCTACTTAGATTCCTTGATGTTCAAGAAGATAGGGTTTCAGTTACTTAATGACCTGATTACGAATATTTTGCAGGTATCTAGTGCCTGCTGACCTGACTGTTGGTCAGTTTGTTTATGTTATCCGGAAAAGAATCAAATTGAGTGCAGAAAAGGCAATTTTCATATTCGTGGACAATGTGCTACCGCCAACAGGTTAAAACACCCTTTTCTCTTCTTGGGTCAAGATCTGTGAGGAAAGGAAAATGGTGATTGTTCTGTTTACAATGAGGGACGACCCTTAGCTATTCTTTCCTAAATATCTTTACCTAAAAGCATAGAAACCATTATACGGGAGACTCATGAGTCGTTCTGATTCATTTAACTTCGCACTTATCTCTCTACCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAGAAGAAGAGAAAAAGAAAAAAAAATTAACTTCATTCTCAAGGTTGACGCCGTTGTATCCTTAGTGATAAGAAGGACTAAATCTTATCTTCACAAGGGAATCATACTGTCCAGTTGAGACATAATCAATCGTGACTTGGTTTCCAGACCACCTAAAAGGCCTCTAACTTATATATCATACATCTATTTCTTTGGTTAGACTTTGTTTGTACTTAACAATTAGAATAGTAATTTCTATACATTTTATTGAAAAAGTTGAGAGTCCCACGTTGAAAAAACCAAGGGGACTTATAATCTATATAAGATAGATGACTTACTCCTCTTATTGTCAATTTGTTTTGGGATGGAACTCCATACTATCAAATTTAACATAAAAGTGTCCAATTGAAGGATAATCTAATAGATATTTTATGAACTTAGTGGTTTTCTGGTCATTTATTTATTTTTTAAAATTTGTACATAGTCAAGTAGTTGTTGTAGAGGATGTAATAAGCAGAAAAGACTTGAGGGAGAGAATACCACGGTCAAACAGTGAGCAGAGGCCAACAATCCTACATAGAGATTGACAACAGTGCGCATGTAATGTTCTCAAAAGAAATGATAAACTATGTATAAGCTGGAAAATACTTGATCAATTGCTTATATTCTAAGAGCTGTAACGTGAGTTTCATACTGCCGTTTTCGATGTTAAAAAATGGAAAAGTAATGGAGATTTGGTTTCCTTAGGAAATGAGTTTCAAAAGTCTAGGCTCCTTCCTATGGATCTTTACTGTCATTGTTTTTTACTTATTTTTCGTTCAGAAAACACCGATAGAGTCAAGTGAGACAATAAAATCATTTAATTATTAACTTTATTTCTTCAGGATCACTGATGTCTGCCATCTATGATGAGAGGAAGGATGAGGATGGGTTTCTCTATGTTACATACAGTGGAGAAAACACATTTGGATGACGTCTACAATAGTACGCAGTTTCTTGCTCCCTCTCTACCTGTTCTTTATTTATTGTCTTCATCAGTCTCCGCAACCCATTGATTATCTACGTTGCTGTTTGTCCAAATATGCCGGCTCGTGTCTGTAAATAAATTGTACAGTGGAAGACTATATATATATATATATATATATGTATGTGAAAAACTTTAATGCCCAAATCATTTCAACTTGTAATCCCCTTGAATTGTATCTAATGAAGTCATAAATTGAAACCTTTAAAGCTTCGAGACCTTGTCGAGAATATGGGCGATGAAATTCAAATTCAAATCCAACATCTTGAGCTGATCAAACTCGATTGAAATTACGAATGGATTATCTCAGCTTTCTGAAGTTAATGTATAATATGATTATTATTTCTTTCACTATGCTGATTTCTCGTTAAACCTACTGAATGATCTTTATCAACTTAGGGAGATAGATATGCAAATTTGTTTCTTAGGTTGTTTTAGTTTGAGTTGATTGTTTTTACCTCAAGTTTGT

Coding sequence (CDS)

ATGAATACTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCCCATTTGAATTGAGGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTCAAAACCACCAATCCTAAGAAGTACTGCGTTCGTCCTAATGCTGGAATTATTTTGCCTAGTAGTGCAAGCAATATTACAGTTACCATGCAAGCTCCTAAGGAGGCACCTCCTGATATGCAATGCAAGGATAAGTTCTTAATTCAAAGTGTTGTAGCACCAGATGGTACAACATCGAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAGGTAGTTGATGAGTTTAAGATGAGGGTTGTTTACATTTTTGCAAATCCTCCTTCGCCTGTCCCAGAAGGATCTGAAGAAGGATCTCCTCCAAGGACCACTGGAGTTGATGATGGAAGCCAAAATTTTGCTTTATTTGATGCCGTTTCAAGATCTCTGGAGGAGCCTAAAGAGAAATCATCACAGGCATGGTCTAACGTTTCTAAGTTGACTGAGGAGAAAGATGCTGCTTTACTAAAGAATCATAAACTACGCCAGGAGCTGGAACTTCTGAGGAAAGAAGCAAGCGGAAGGCAGGGTGGCGGTTTCTCTGTATTGTTTGTGGTGCTAGTCGGTCTCATTGGAGTTCTGATTGGTTACTTGGTGAAGAAAACATAG

Protein sequence

MNTGDYINIQPSELKFPFELRKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSASNITVTMQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANPPSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAALLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT

Homology

[Close]

BLAST of Cucsat.G18055 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-51
Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQA KEAP DMQCKDKFL+Q+VV  DGTTSK++ AE+FNK  G+V+++FK+RVVYI ANP
Sbjct: 72  MQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANP 131

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEG+ P  +  D  SQ+ +LFD VSR+ EE  EKSS+AWS +SKLTEEK +A
Sbjct: 132 PSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLTEEKTSA 191

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKK 168
             ++ KLR ELE+LRKE S +Q GG S+L ++LVGL+G +IGYL+ +
Sbjct: 192 TQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLNR 238

[Close]

BLAST of Cucsat.G18055 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-36
Identity = 84/170 (49.41%), Postives = 122/170 (71.76%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIF-AN 60
           MQA KEAP D+QCKDKFL+Q VVA  G T KD++ E+F+K  G  V+E K+RVVY+    
Sbjct: 70  MQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPR 129

Query: 61  PPSPVPEGSEEGSPPRTTGVDDG-SQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKD 120
           PPSPV EGSEEGS PR +  D+G + +F      S    + ++ SS+A + V+KLTEEK+
Sbjct: 130 PPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALVTKLTEEKN 189

Query: 121 AALLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 169
           +A+  N++L+QEL+ LR+E+   + GG   ++V+LVGLIG+++GY++K+T
Sbjct: 190 SAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of Cucsat.G18055 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.0e-35
Identity = 80/170 (47.06%), Postives = 120/170 (70.59%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIF-AN 60
           MQA KEAP DMQCKDKFL+Q V+A  G T+K+++ E+F+K  G  V+E K+RV Y+    
Sbjct: 87  MQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPR 146

Query: 61  PPSPVPEGSEEGSPPRTTGVDDG-SQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKD 120
           PPSPV EGSEEGS PR +  D+G    F+    +  +    +E +S+A + ++KLTEEK 
Sbjct: 147 PPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALITKLTEEKQ 206

Query: 121 AALLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 169
           +A+  N++L++EL+ LR+E+   Q GG   ++V+LVGLIG+++GY++K+T
Sbjct: 207 SAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

[Close]

BLAST of Cucsat.G18055 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19
Identity = 63/169 (37.28%), Postives = 93/169 (55.03%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           +QA +E PPDMQCKDKFL+QS + P  T   ++  + F K  GK + E K++V YI    
Sbjct: 74  LQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYI---T 133

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PS     SE G+   T G  DG                   +SS+  S + +L EE+DAA
Sbjct: 134 PSTTQRSSESGA---TNG--DG-------------------QSSETISTIQRLKEERDAA 193

Query: 121 LLKNHKLRQELELLRKEASGR-QGGGFSVLFVVLVGLIGVLIGYLVKKT 169
           + +  +L+ ELE +R+  + R  G G S+    +VGLIG++IG+++K T
Sbjct: 194 VKQTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLT 215

[Close]

BLAST of Cucsat.G18055 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 52/122 (42.62%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIF-AN 60
           MQA KEAP DMQC+DK L Q  V    TT+KD+++E+F+K  G   +E +++V+Y+    
Sbjct: 241 MQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQ 300

Query: 61  PPSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDA 120
           PPSPV EG+EEGS PR +  D+G+ + A  D + RSL  P       +SN +  T++   
Sbjct: 301 PPSPVQEGTEEGSSPRASVSDNGNASEAFVDML-RSLLVP------LFSNAASSTDDHGI 355

Query: 121 AL 122
            L
Sbjct: 361 TL 355

[Close]

BLAST of Cucsat.G18055 vs. NCBI nr
Match: XP_004140485.1 (vesicle-associated protein 1-3 isoform X1 [Cucumis sativus] >KGN46572.1 hypothetical protein Csa_005383 [Cucumis sativus])

HSP 1 Score: 324 bits (830), Expect = 2.02e-110
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 71  MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA
Sbjct: 131 PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 191 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 238

[Close]

BLAST of Cucsat.G18055 vs. NCBI nr
Match: TYK14007.1 (vesicle-associated protein 1-3 [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (827), Expect = 2.19e-110
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 43  MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 102

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTTGVDDG+QNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA
Sbjct: 103 PSPVPEGSEEGSPPRTTGVDDGNQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 162

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 163 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 210

[Close]

BLAST of Cucsat.G18055 vs. NCBI nr
Match: XP_008458137.1 (PREDICTED: vesicle-associated protein 1-3 [Cucumis melo])

HSP 1 Score: 323 bits (827), Expect = 5.79e-110
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 71  MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTTGVDDG+QNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA
Sbjct: 131 PSPVPEGSEEGSPPRTTGVDDGNQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 191 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 238

[Close]

BLAST of Cucsat.G18055 vs. NCBI nr
Match: XP_038874796.1 (vesicle-associated protein 1-3 [Benincasa hispida])

HSP 1 Score: 312 bits (799), Expect = 1.06e-105
Identity = 162/168 (96.43%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKE PPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 71  MQAPKETPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTT VDDG+QNFALFDAVSRSLEEPKEKSSQ WSNVSKLTEEKDAA
Sbjct: 131 PSPVPEGSEEGSPPRTTAVDDGNQNFALFDAVSRSLEEPKEKSSQTWSNVSKLTEEKDAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           L KN KLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 191 LQKNQKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 238

[Close]

BLAST of Cucsat.G18055 vs. NCBI nr
Match: XP_023000064.1 (vesicle-associated protein 1-3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 295 bits (755), Expect = 5.33e-99
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQ PKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVY FANP
Sbjct: 71  MQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYTFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRT  VDDG+QNFALFDAVSRSLE+PKEKSSQ WS VSKLTEEK AA
Sbjct: 131 PSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSTVSKLTEEKVAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           L +N KLRQELELLRKE+SGRQGGGFSVL VVLVGLIGVLIGYL+KKT
Sbjct: 191 LQQNQKLRQELELLRKESSGRQGGGFSVLLVVLVGLIGVLIGYLLKKT 238

[Close]

BLAST of Cucsat.G18055 vs. ExPASy TrEMBL
Match: A0A0A0KDW5 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109670 PE=4 SV=1)

HSP 1 Score: 324 bits (830), Expect = 9.79e-111
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 71  MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA
Sbjct: 131 PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 191 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 238

[Close]

BLAST of Cucsat.G18055 vs. ExPASy TrEMBL
Match: A0A5D3CQ04 (Vesicle-associated protein 1-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00040 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.06e-110
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 43  MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 102

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTTGVDDG+QNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA
Sbjct: 103 PSPVPEGSEEGSPPRTTGVDDGNQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 162

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 163 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 210

[Close]

BLAST of Cucsat.G18055 vs. ExPASy TrEMBL
Match: A0A1S3C7R5 (vesicle-associated protein 1-3 OS=Cucumis melo OX=3656 GN=LOC103497662 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 2.80e-110
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP
Sbjct: 71  MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRTTGVDDG+QNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA
Sbjct: 131 PSPVPEGSEEGSPPRTTGVDDGNQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT
Sbjct: 191 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 238

[Close]

BLAST of Cucsat.G18055 vs. ExPASy TrEMBL
Match: A0A6J1KIV3 (vesicle-associated protein 1-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494368 PE=4 SV=1)

HSP 1 Score: 295 bits (755), Expect = 2.58e-99
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQ PKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVY FANP
Sbjct: 71  MQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYTFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRT  VDDG+QNFALFDAVSRSLE+PKEKSSQ WS VSKLTEEK AA
Sbjct: 131 PSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSTVSKLTEEKVAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           L +N KLRQELELLRKE+SGRQGGGFSVL VVLVGLIGVLIGYL+KKT
Sbjct: 191 LQQNQKLRQELELLRKESSGRQGGGFSVLLVVLVGLIGVLIGYLLKKT 238

[Close]

BLAST of Cucsat.G18055 vs. ExPASy TrEMBL
Match: A0A6J1HNF1 (vesicle-associated protein 1-3-like OS=Cucurbita moschata OX=3662 GN=LOC111464514 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 5.20e-99
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYIFANP 60
           MQ PKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVY FANP
Sbjct: 71  MQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYSFANP 130

Query: 61  PSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAA 120
           PSPVPEGSEEGSPPRT  VDDG+QNFALFDAVSRSLE+PKEKSSQ WS VSKLTEEK AA
Sbjct: 131 PSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSAVSKLTEEKAAA 190

Query: 121 LLKNHKLRQELELLRKEASGRQGGGFSVLFVVLVGLIGVLIGYLVKKT 168
           L +N KLRQELELLRKE+SGRQGGGFSVL VVLVGLIGVLIGYL+KKT
Sbjct: 191 LQQNQKLRQELELLRKESSGRQGGGFSVLLVVLVGLIGVLIGYLLKKT 238

The following BLAST results are available for this feature:

BLAST of Cucsat.G18055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW5	1.6e-51	62.87	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SHC8	2.4e-36	49.41	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	6.0e-35	47.06	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
Q9LVU1	3.5e-19	37.28	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]
Q9SYC9	1.6e-16	42.62	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]

BLAST of Cucsat.G18055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140485.1	2.02e-110	100.00	vesicle-associated protein 1-3 isoform X1 [Cucumis sativus] >KGN46572.1 hypothet...	[more]
TYK14007.1	2.19e-110	99.40	vesicle-associated protein 1-3 [Cucumis melo var. makuwa]	[more]
XP_008458137.1	5.79e-110	99.40	PREDICTED: vesicle-associated protein 1-3 [Cucumis melo]	[more]
XP_038874796.1	1.06e-105	96.43	vesicle-associated protein 1-3 [Benincasa hispida]	[more]
XP_023000064.1	5.33e-99	91.07	vesicle-associated protein 1-3-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Cucsat.G18055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDW5	9.79e-111	100.00	MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109670 PE=4 SV...	[more]
A0A5D3CQ04	1.06e-110	99.40	Vesicle-associated protein 1-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C7R5	2.80e-110	99.40	vesicle-associated protein 1-3 OS=Cucumis melo OX=3656 GN=LOC103497662 PE=4 SV=1	[more]
A0A6J1KIV3	2.58e-99	91.07	vesicle-associated protein 1-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HNF1	5.20e-99	91.07	vesicle-associated protein 1-3-like OS=Cucurbita moschata OX=3662 GN=LOC11146451...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 7..104 e-value: 1.4E-33 score: 115.0
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 6..124 score: 28.307159
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 2..114 e-value: 3.3E-41 score: 142.2
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 1..107
None	No IPR available	PANTHER	PTHR10809:SF111	VESICLE-ASSOCIATED PROTEIN 1-3	coord: 1..107
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 2..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18055.T6	Cucsat.G18055.T6	mRNA
Cucsat.G18055.T26	Cucsat.G18055.T26	mRNA
Cucsat.G18055.T27	Cucsat.G18055.T27	mRNA
Cucsat.G18055.T9	Cucsat.G18055.T9	mRNA
Cucsat.G18055.T8	Cucsat.G18055.T8	mRNA
Cucsat.G18055.T7	Cucsat.G18055.T7	mRNA
Cucsat.G18055.T5	Cucsat.G18055.T5	mRNA
Cucsat.G18055.T4	Cucsat.G18055.T4	mRNA
Cucsat.G18055.T3	Cucsat.G18055.T3	mRNA
Cucsat.G18055.T1	Cucsat.G18055.T1	mRNA
Cucsat.G18055.T17	Cucsat.G18055.T17	mRNA
Cucsat.G18055.T16	Cucsat.G18055.T16	mRNA
Cucsat.G18055.T15	Cucsat.G18055.T15	mRNA
Cucsat.G18055.T14	Cucsat.G18055.T14	mRNA
Cucsat.G18055.T13	Cucsat.G18055.T13	mRNA
Cucsat.G18055.T12	Cucsat.G18055.T12	mRNA
Cucsat.G18055.T11	Cucsat.G18055.T11	mRNA
Cucsat.G18055.T10	Cucsat.G18055.T10	mRNA
Cucsat.G18055.T18	Cucsat.G18055.T18	mRNA
Cucsat.G18055.T24	Cucsat.G18055.T24	mRNA
Cucsat.G18055.T25	Cucsat.G18055.T25	mRNA
Cucsat.G18055.T22	Cucsat.G18055.T22	mRNA
Cucsat.G18055.T20	Cucsat.G18055.T20	mRNA
Cucsat.G18055.T21	Cucsat.G18055.T21	mRNA
Cucsat.G18055.T19	Cucsat.G18055.T19	mRNA
Cucsat.G18055.T23	Cucsat.G18055.T23	mRNA
Cucsat.G18055.T2	Cucsat.G18055.T2	mRNA
Cucsat.G18055.T30	Cucsat.G18055.T30	mRNA
Cucsat.G18055.T28	Cucsat.G18055.T28	mRNA
Cucsat.G18055.T29	Cucsat.G18055.T29	mRNA
Cucsat.G18055.T31	Cucsat.G18055.T31	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005886	plasma membrane