Cucsat.G16864 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16864
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	cytochrome c oxidase subunit 5b-1, mitochondrial
Location	ctg24: 2239722 .. 2244462 (-)
RNA-Seq Expression	Cucsat.G16864
Synteny	Cucsat.G16864

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCATGCGTTGCACTACAGCTTGGGCCTGGCGCACCCCTCCAATAACTAGATATAAATCTTTGATGTTGATCTTTCATTGATTTTTTTTAATCACTAAATGATGTATTAAATTGTCTGACATGCTTGTTTAAGGGAAATAATAATTTGTGACAGTAATTGGACATTTATGTTTTGGTAGTTATAACAATTTTGCTAACAACTGAATTATAACAATTTTGCTCACACCTGAATTATAACAATTTTGCTCACCTGAATTATAACAATTTTGCTCACACCTGAATTATAACAATTTTGCTCGCACCTGAATTGTAACTTTGACATTTGGGGAAGTTTTGCATAATCTGTTAAAAACCATGAACACCCTTTAAATTAGAACGTTTGTACTTTTACGACAACGAATTCCATTGGCATTGATTTCATCGAGAAAATCTTTGAGCCTATTTGATCCTATCCCCATTCAAAAGGAAAAGGGATAAAGAGAGAATAATAACCACCCCACCATTGAAGCAACTTGAAGAAGAGCAGAGGAATTAAGAAAAAACAGAGTACGAAATGAAAAATCCAGTGGCAAATTGAAAAGTAAGTGAATTGAGTTGGAGTGATGGGAGAGGGGAAATTTCAAACATGGAGTTGATAAAATTCGAAGAATTAGAGGGGGAGGTGATGCTCCGATATAGATAATTATTTTTAAAACATCCTCAGGTCTGATTGCAACAATTAACAAATTTTAATAACATATTTAATCAATTCAAAAAATATAATTGATTCAAATTAAAAGTTGAAGAATACAATAATCCAAAAAGAAAAACAATAAAAAAAAGAAATTAAAAGAAAGGGAAATCTCCTGCGGCAGACTTCAGGTAAAACCGTCCGTACCAAATCATCAGGGAGCTATCACTCTCAGCGAAGCCAGACCTCCTCTTGACTTATTTGCGTATTTCTCCATTACCATTAAGAAACCGCTAAAGAAGAAGAGAGAAACAGATTGATTGAACAAAGAAAAGCTAATTAGTTCGCCGGAGAATCACCAACCATGTGGAGGAGATTGCTCTCTTTGCGCCTCAGTGCCCTAAAACGTCTTCCTTCATCATCGACGGCAGCATCTGCTGCTCCATCCGGATCCATTTCCACAGCCTCACGACTTGCTGTTGCTGCTTCATCTCGCGTTTCTCCCTCACCTTACGTTTCGCTCTTCGCTCGCCATTTCAGCGCCGAGGCTGGTATATTATATTGTCTTCGCTGGATTTCGTATTCGTATTTTACATTCGGCACCGAGTTTATGAACGTGGATCTATTGTATGATTTGGTCTCGTATGATTGATATTTTGATTATTTTTTTTGTTGTAAATTAGCTGTTGATGCTGGTCTGAAAAAGAATGTTGAGGATGTAATGCCGATTGCAACCGGTCACGAGCGTGAAGAGCTTGAAGCTGCGCTTGAGGTGTTTTTTCTTTTGTTTCGATGCGCGGTTTCGTTTTTCCGATTTGATATTGAAAAAATGAAAAAAGATAAAGATAAACGAAAACAGCGGCATACAGACTGAACATAGGTAAAAGATGCTCCCAATCATGCGGAAAAAGGACATCAGGTGGATTATTTGTAGTTGTACTATACCTAAATTAATTCCTTCATTTTCATCCGAAGGTTACTATCAAATCTCTACGTACGCCGTTTTATTTATATTTGTGGACGGTCAGTTATCAAACAAATCTTTTTTGCCGTTCCTTGAATGATTTTAGAAAAGGTCGACTGAATTTTTGACAGAAAAATTTCTGCACGAGGCCTGATGATAATAGCTCATTCTATTTCAAATATGTTGATAGATTTTGGAGAGGAATAGGTGTAATAATCAACCAATAAAAGAAGCAGCGTATAACTTATGATTTATGAACAGGTGTGCTAAAAGGTTTAACATAATGATTGAGCAAACATTAAAAAAAAAAAAGCTGAGTCAACAACCTGTTGGGTCTGTTTGACTAAGGCTCTGGAATGATAGGTGCCATACGATATGATCCAAAACATTCCAATTGGCATGTTGTATTTCGTGGGATTCTTAAATTTTCTGAGGCAATCCTCATTTCTCATATTGTACTGACTATTTAGTCTGGTTTATGTAAATATTTCAATTGGTTGGTATGAAGTATAATCCATTATCAAAATGAAGTCTCATTTCAATGGGGTTTATGTTTGCAGGGAAGAGACATCCTTGATATAGACAACCCTGTAGGTCCTTTTGGCACTAAGGTTGGTATATTTTGCTGTTTACATGTTAATTTTATTTTTGTACACTTTGGGTTGTGTCCGAGGAAACCCCTTTTCTCCCTTTCTTCGTACTTCATATTGATGTCCTATTTGTTATAAACTTATAAATAAAGGAACATGCAATGTTAAACCATACTTTACTGTGTTGTGACTTGTGAGCCTGTGTGTACTTTCCGATAATTTACATGCCAAATTACTATTGTAGTCTGATGACTTTTGGGTACTCAAAAGGGTATTGCATGCTATCTTTAGTTCAAGAAGATTTTTTCAGCAGGTTCTTCACTCCTTTTATATAAAGTAGGCGCTTTAGGCAAAATCTAAGGGAGAGAGTTCTTTGAGCCACACCATTTGTGTTGATCCTTTGAGGAAAAATTGACCGAGGGTACACCTTCCATTTTTAGGCAGCTTGCTGTATGAAATATTTTGAATAAATCCAGGAAAATAGAAGTTTATGAAACCCGAAGTATGATTTAGGAAGCTCACTGAAAAAGCATTAGAAGATACTTTGGATTTTCATAATCAAACCTTTGGGCCTACGCTGATATGAGCATACGTCGCTCAGGTGGTCAGGCATTACTCAATGATGCTTCTTCTTATTGGGTGTAGGTTCAATTCTCCTTCTTGTGGCACAATATTTATGGCTCGGTGGTACTAAGTGAGGATTTTTACTGCAATTCCCGTTTTATCTTATCTGTTTTGTTTGTAGTTTGGTCTTTATTTTACATCTATGGTGGTACTAAGTGAGGATTTTTACTGCAATTCCCGTTTTATCTTGTCTGTTTTGTTTGTAGTTTGGTCTTTATTTTACATCTATGACTTTGAATGTTAGTACTTTTATGTGGTGGTTATTAATTTTGTGATTAGTTGTTTATTTATATATGAGTACACTTCGCTTCAAATTCAATGAGCCAGAAACTGGTTTTGCCCTTGATGAACATCAAAATACCGCGAGAGGATGTGCATGAAAGAATAAGTTTGGTTGCATGAACTATTTCTTTGGATGAAATCTAAACACTTTCTTGTGTCATTAGGAAGCTCCTGCTGTTATAAAGTCATATTATGATGAAAGAATAGTTGGGTGTCCTGGTGGTGAAGGCGGTAAGTACTTGCAGTTTCTCTTTAAAGTTTTATCCATGCCTTTTCATCAAGTTTGTGCAAGCCTGACAAAATTTTACATATGTAGATTTTGCATTCTTCCCTACACAAGATTTTCCAACTTACTTCTGTCTCATGTTTTTCGATTTTTGTAGATGATGAACACGATGTTGTCTGGTTTCGGCTGAAGAAAGGCGAGCCACATGAATGCCCTGTGTGCACACAGTATTTCACGGTGAGGATTTATGGTAAATAATTATGTTATGTTGCCAATATGGAATGCTTGAAATGGTACTAAAAAATGTAAAATAAAACACTAACTTCATTGAGAGTAAAATATCATTTTGGAGACCCCAAAACCTAACCATGGATTACAATCTATTCTAATTTTAATTAATTTTTATGTATAGCTAAATCGAACCTAGGTCAACTATTTAAGACATTACAACTTCAACCTAAAGGTTAACGATTCAAACCACCCATCCTCACCTCGTGTTGAAGTAAAAAAATAGGTTTAAGTTTCCTCCTCTGTTCAGCGTGGGTTAATTAATTGCATTCTTCACGTTATTATTATTATTTAGATTTCAACAAGTAGAGGTGGAAGGATTCAAACTTATGACCCATTGGTCGAGGACAAATCCTTTGCCAATTGAGTTATATGCTATATTTGGTTCTTCTAGTTATGATTAGAATCAAAGTATGTATGTTAGTTCCCTCTCCAATAGTCCCACTTCTTGAATTTGAATACGGATAAAGACATTTGAGTCTCAATCGGAAATTAATTCGGAATGCCAAAATTTTCTAATTTGAAATTGTGTTCGCAGTTGGAAGTAGTCGGACCTGGAGGATCGCCAGATGGTTATGGAAATGACGACGATCACCATCATTGATTGCATACATTTTTTCTAGAATAAACCGGTACTTTAAAGAGAGAGAATTCAAAATACGCTGCAGTTTTAATCTGAAGCTGTGTGTATTCCCAGTTGTTGCTTCAGCAACAATAGAAATCTGAGTTTTTTCGTTCTTAATTAAGATCCAACAGGTATGTCTTCTTTTGGAAGATGCAAATCCTTTTAGGCTTTTACCAAATAATTGGAGGCTTCTTGATTCTTTACCATGACCCAGGTGGTAGTACAATAACACACACCCCCTTTTGATCTTAATATATAATTTAAGAAACTTGCTGAATTCACTCTCTTTATTAGCTCTTCTATTACAAATCTTGTTTACTTTATTATTGCAATTTGCAATATAATCTTTTCTCTGTCCACTAGACCTCGATACCTTCTGTAAGCCTTTTTTGGGATTTCTTTTATAAGTTGCTTGGTTTTAGTACCTATATGTGGAGAGAATCAACCTTTAATTTTGAATTTGATAATATA

Coding sequence (CDS)

ATGTGGAGGAGATTGCTCTCTTTGCGCCTCAGTGCCCTAAAACGTCTTCCTTCATCATCGACGGCAGCATCTGCTGCTCCATCCGGATCCATTTCCACAGCCTCACGACTTGCTGTTGCTGCTTCATCTCGCGTTTCTCCCTCACCTTACGTTTCGCTCTTCGCTCGCCATTTCAGCGCCGAGGCTGCTGTTGATGCTGGTCTGAAAAAGAATGTTGAGGATGTAATGCCGATTGCAACCGGTCACGAGCGTGAAGAGCTTGAAGCTGCGCTTGAGGGAAGAGACATCCTTGATATAGACAACCCTGTAGGTCCTTTTGGCACTAAGGAAGCTCCTGCTGTTATAAAGTCATATTATGATGAAAGAATAGTTGGGTGTCCTGGTGGTGAAGGCGATGATGAACACGATGTTGTCTGGTTTCGGCTGAAGAAAGGCGAGCCACATGAATGCCCTGTGTGCACACAGTATTTCACGTTGGAAGTAGTCGGACCTGGAGGATCGCCAGATGGTTATGGAAATGACGACGATCACCATCATTGA

Protein sequence

MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSAEAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYDERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH

Homology

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BLAST of Cucsat.G16864 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-54
Identity = 112/184 (60.87%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 1   MWRRLLSLRLSAL-----KRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFA 60
           MWRR++S +L  L        P  S AA+  P G    A+R A++ASS V P        
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIP-------- 60

Query: 61  RHFSAEAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVI 120
           R FS++ +V+    K VEDVMPIATGHE+EELEA LEGR + DID P GPFGTKEAPA++
Sbjct: 61  RRFSSD-SVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIV 120

Query: 121 KSYYDERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDD 180
           KSYYD+RIVGCPGGEG+DEHDVVWF L+KG+  ECPVCTQYF LEVVGPGG PDG+G++D
Sbjct: 121 KSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDED 175

[Close]

BLAST of Cucsat.G16864 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52
Identity = 110/179 (61.45%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSP-YVSLFARHFS 60
           MWRR++S  L ++     S+  + AAPS   +      ++ S+R S  P Y S+F+R   
Sbjct: 1   MWRRIVSSHLKSI-----SAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYSSIFSR-LI 60

Query: 61  AEAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYY 120
             AA D  +KK VEDVMPIATGHE+EEL+A LEGR + DID P GPFGTKEAPAV+KSYY
Sbjct: 61  GSAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYY 120

Query: 121 DERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHH 179
           D RIVGCPGGEG+DEHDVVWF L+KG+  ECPVCTQYF LEVVGPGG PDG+G  DDHH
Sbjct: 121 DMRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHG--DDHH 171

[Close]

BLAST of Cucsat.G16864 vs. ExPASy Swiss-Prot
Match: Q9SSS5 (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-28
Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 87  LEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYDERIVGCPGGEGDDEHDVVWFRLKKGE 146
           L+    GR +LDID+P  PFGTKE+PAV++SY+D+R +GC GGEG+D HDVVWF L KG+
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 147 PHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 180
             ECPVC+QYF        G PDG+G+D+DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

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BLAST of Cucsat.G16864 vs. ExPASy Swiss-Prot
Match: P29505 (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3)

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-07
Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 104 GPFGTKEAPAVIKSYYDERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVG 163
           G FGT ++P +++S +  RIV C GG+G +EHD+++  + + +P  C  C Q F L+ + 
Sbjct: 54  GAFGTLKSPVIVESIFHSRIVACEGGDG-EEHDILFHTVAEKKPTICLDCGQVFKLKHIS 113

Query: 164 PGG 167
             G
Sbjct: 114 SEG 115

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BLAST of Cucsat.G16864 vs. ExPASy Swiss-Prot
Match: P79010 (Cytochrome c oxidase subunit 4, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox4 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-06
Identity = 28/86 (32.56%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 79  ATGHEREELEAALEGRDILDIDN-PVGPFGTKEAPAVIKSYYDERIVGCPGGEGDDEHDV 138
           ATG ER EL + L GRD  D+        GT   P ++ S    R +GC G      H++
Sbjct: 72  ATGLERYELLSELSGRDAFDMKPLDASRKGTLTDPIMVTSLDPYRHIGCTGSP-SGSHNL 131

Query: 139 VWFRLKKGEPHECPVCTQYFTLEVVG 164
           +W  + K +   CP C   + L+ +G
Sbjct: 132 IWMTVYKDKLRRCPECGSVYKLKFMG 156

[Close]

BLAST of Cucsat.G16864 vs. NCBI nr
Match: XP_004152218.1 (cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus] >KGN52866.1 hypothetical protein Csa_014612 [Cucumis sativus])

HSP 1 Score: 355 bits (912), Expect = 1.27e-123
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179

[Close]

BLAST of Cucsat.G16864 vs. NCBI nr
Match: XP_008454275.1 (PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis melo] >KAA0044422.1 cytochrome c oxidase subunit 5b-1 [Cucumis melo var. makuwa] >TYK29549.1 cytochrome c oxidase subunit 5b-1 [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (854), Expect = 8.88e-115
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWRRLLSL L+ALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSP VSLFARHFSA
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAAVDAGL+KNVEDVMPIATGHEREELEA LEGRDILDI+NPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ERIVGCPGGEG+DEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHHH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHHH 179

[Close]

BLAST of Cucsat.G16864 vs. NCBI nr
Match: XP_038878141.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 323 bits (827), Expect = 9.75e-111
Identity = 165/179 (92.18%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWRRLLSL+L+ALKRLPSSSTA    PS SISTASRLAVAASS VSPSPY+SLFARHFSA
Sbjct: 1   MWRRLLSLQLNALKRLPSSSTA----PSVSISTASRLAVAASSYVSPSPYISLFARHFSA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDI+NPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ER+VGCPGGEG+DEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDGYG DDDHHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYG-DDDHHH 174

[Close]

BLAST of Cucsat.G16864 vs. NCBI nr
Match: XP_022998034.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 297 bits (760), Expect = 1.76e-100
Identity = 151/179 (84.36%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWR+LL  +L ALK  PS+S AASA P G IS ASRL VAASS V PSP+VS +ARH+  
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAASA-PLGFISRASRLTVAASSHVFPSPHVSFYARHYGV 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAA DAGLKK VEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKE PAVIKSYYD
Sbjct: 61  EAA-DAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ER+VGCPGGEG+DEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDGYGNDDDHHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNDDDHHH 177

[Close]

BLAST of Cucsat.G16864 vs. NCBI nr
Match: XP_023523888.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023523889.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297 bits (760), Expect = 1.76e-100
Identity = 151/179 (84.36%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWR+LL  +L ALK  PS+S AASA P G IS ASRL VAASS V PSP+VS +ARH+ A
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAASA-PLGFISRASRLTVAASSHVFPSPHVSFYARHYGA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAA DAGLKK VEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKE PAVIKSYYD
Sbjct: 61  EAA-DAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ER+VGCPGGEG+DEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDGYGN+DDHHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNEDDHHH 177

[Close]

BLAST of Cucsat.G16864 vs. ExPASy TrEMBL
Match: A0A0A0KYD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 6.15e-124
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179

[Close]

BLAST of Cucsat.G16864 vs. ExPASy TrEMBL
Match: A0A5A7TM92 (Cytochrome c oxidase subunit 5b-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001540 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 4.30e-115
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWRRLLSL L+ALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSP VSLFARHFSA
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAAVDAGL+KNVEDVMPIATGHEREELEA LEGRDILDI+NPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ERIVGCPGGEG+DEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHHH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHHH 179

[Close]

BLAST of Cucsat.G16864 vs. ExPASy TrEMBL
Match: A0A1S3BYC3 (cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494723 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 4.30e-115
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWRRLLSL L+ALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSP VSLFARHFSA
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAAVDAGL+KNVEDVMPIATGHEREELEA LEGRDILDI+NPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ERIVGCPGGEG+DEHDV+WFRL+KGEP ECPVCTQYF LEVVGPGGSPDGYG+DDDHHH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHHH 179

[Close]

BLAST of Cucsat.G16864 vs. ExPASy TrEMBL
Match: A0A6J1KD83 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492803 PE=4 SV=1)

HSP 1 Score: 297 bits (760), Expect = 8.54e-101
Identity = 151/179 (84.36%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWR+LL  +L ALK  PS+S AASA P G IS ASRL VAASS V PSP+VS +ARH+  
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAASA-PLGFISRASRLTVAASSHVFPSPHVSFYARHYGV 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EAA DAGLKK VEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKE PAVIKSYYD
Sbjct: 61  EAA-DAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ER+VGCPGGEG+DEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDGYGNDDDHHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNDDDHHH 177

[Close]

BLAST of Cucsat.G16864 vs. ExPASy TrEMBL
Match: A0A6J1GC67 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452829 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 1.41e-99
Identity = 149/179 (83.24%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60
           MWR+ L  +L ALK  PS+S AASA P G IS ASRL VAASS V PSP+VS +ARH+ A
Sbjct: 1   MWRKFLFSQLRALKSFPSTSAAASA-PLGFISRASRLTVAASSHVFPSPHVSFYARHYGA 60

Query: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120
           EA VDAGLKK VEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKE PAVIKSYYD
Sbjct: 61  EA-VDAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYD 120

Query: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179
           ER+VGCPGGEG+DEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDG+GN+DDHHH
Sbjct: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGFGNEDDHHH 177

The following BLAST results are available for this feature:

BLAST of Cucsat.G16864 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW15	2.8e-54	60.87	Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSB8	1.2e-52	61.45	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSS5	2.0e-28	59.14	Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN...	[more]
P29505	4.3e-07	36.51	Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1...	[more]
P79010	4.8e-06	32.56	Cytochrome c oxidase subunit 4, mitochondrial OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Cucsat.G16864 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152218.1	1.27e-123	100.00	cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus] >KGN52866.1 h...	[more]
XP_008454275.1	8.88e-115	93.30	PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis melo] >KAA0...	[more]
XP_038878141.1	9.75e-111	92.18	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Benincasa hispida]	[more]
XP_022998034.1	1.76e-100	84.36	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima]	[more]
XP_023523888.1	1.76e-100	84.36	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita pepo subsp. pep...	[more]

BLAST of Cucsat.G16864 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYD4	6.15e-124	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004280 PE=4 SV=1	[more]
A0A5A7TM92	4.30e-115	93.30	Cytochrome c oxidase subunit 5b-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BYC3	4.30e-115	93.30	cytochrome c oxidase subunit 5b-1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1KD83	8.54e-101	84.36	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GC67	1.41e-99	83.24	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036972	Cytochrome c oxidase, subunit Vb superfamily	GENE3D	2.60.11.10	Cytochrome c oxidase, subunit Vb	coord: 69..110 e-value: 1.6E-5 score: 26.7
IPR002124	Cytochrome c oxidase, subunit Vb	PANTHER	PTHR10122	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	coord: 1..109
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 69..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16864.T1	Cucsat.G16864.T1	mRNA
Cucsat.G16864.T2	Cucsat.G16864.T2	mRNA
Cucsat.G16864.T4	Cucsat.G16864.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005740	mitochondrial envelope