Cucsat.G16856 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16856
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat-containing protein
Location	ctg24: 2159114 .. 2161853 (-)
RNA-Seq Expression	Cucsat.G16856
Synteny	Cucsat.G16856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGGAAATGAAAGACAGGGGCTTGAGTGTAAATGTTCAGATGTATAATAACATTATTGATGCTCGATATAAGCTCGGTTTTGATATTAAAGCAAAGGATACACTTAAAGAAATGTCTGAGAATTGCTGTGAACCAGATCTTGTGACTTATAATACTCTAATAAACCATTTCTGTAGCAGGGGGGAGGTCGAGGAAGCTGAGAAGCTCTTGGAACAAACAATAAGAAGAGGATTGGCACCGAATAAGCTCACTTATACCCCTCTTGTTCATGGGTACTGTAAACAAGGGGAATATACTAAGGCCACAGATTATCTTATTGAGATGTCAACAAGTGGGCTTGAAGTTGATATGATTTCGTATGGAGCTTTAATCCATGGACTTGTTGTTGCAGGGGAAGTCGATACTGCATTGACAATCCGCGACAGAATGATGAACCGAGGAATCTTGCCTGATGCGAATATCTACAATGTTTTGATGAATGGACTTTTCAAGAAAGGGAAACTTTCCATGGCAAAGGTGATGCTTACTGAGATGCTTGACCAAAATATAGCTCCTGATGCATTTGTTTATGCTACTTTAGTGGATGGGTTCATTAGGCATGGCAACCTTGATGAGGCCAAGAAACTCTTTCAGCTCATTATTGAAAAGGGTCTAGACCCCGGTGTTGTTGGATATAATGTCATGATCAAAGGTTTCTCAAAATCTGGGATGATGGACAATGCAATTTTATGCATTGATAAAATGCGGCGTGCACATCATGTTCCTGACATATTTACTTTCTCCACCATAATTGACGGATACGTAAAACAACACAACATGAATGCTGTGCTGAAGATCTTTGGACTGATGGTGAAGCAGAACTGCAAGCCTAACGTTGTTACTTACACCTCTTTGATCAATGGATATTGCCGCAAAGGGGAAACTAAGATGGCTGAAAAACTTTTTAGCATGATGCGATCTCATGGGTTGAAGCCTAGTGTTGTGACATACAGTATACTTATAGGAAGCTTTTGCAAAGAAGCTAAGCTTGGAAAAGCTGTGTCATATTTTGAGCTAATGTTGATTAACAAATGCACTCCTAATGATGCTGCATTTCATTATCTAGTCAATGGGTTTACAAATACAAAAGCTACTGCAGTTTCAAGAGAACCAAATAATCTTCATGAAAATTCCAGATCGATGTTTGAGGACTTCTTTTCGAGAATGATAGGTGATGGATGGACGCAAAAGGCTGCTGCTTACAATTGTATTCTCATTTGCCTTTGTCAGCAAAGAATGGTTAAAACTGCCTTGCAATTGCGCAATAAAATGCTGGCTTTTGGACTTTGTTCTGATGCTGTTTCTTTTGTTGCATTGATACATGGCATTTGCTTGGAAGGAAACTCAAAAGAGTGGAGGAACATGATTTCTTGTGATTTGAATGAAGGAGAACTTCAAATTGCCTTGAAATACTCACTTGAACTAGACAAGTTCATACCTGAGGGAGGTATTTCTGAGGCTTCAGGCATTTTGCAGGCTATGATTAAGGGTTACGTGTCTCCTAATCAGGATTTGAACAATTTGAAGGAGCCAAATATGGAGAATGGTAAGGAACTGAGATAGCTCAACCTGTACAACTAAAAGAAATTTGAACTAATTTATGCTGGCCCTATCGTGAGTTGGGTTTCAGCAGTGACGTAGCTCAGATAGTTAGATGGCAGCAGTCAGGCCATTTTCACATCCTGGCTTATAGGTATTGGCAAACAAAAGCTAGGGAGCCCAGGCATGACATTGGATTGAGCATTTCTAGGTTTTATGTTGGATTCTATGTTGTATACCAAATGAGAAAATTTTATTTAAAAGTTGTGAATACAAGTAGATAAGTACTTTATT

Coding sequence (CDS)

ATGGGGGAAGTCGATACTGCATTGACAATCCGCGACAGAATGATGAACCGAGGAATCTTGCCTGATGCGAATATCTACAATGTTTTGATGAATGGACTTTTCAAGAAAGGGAAACTTTCCATGGCAAAGGTGATGCTTACTGAGATGCTTGACCAAAATATAGCTCCTGATGCATTTGTTTATGCTACTTTAGTGGATGGGTTCATTAGGCATGGCAACCTTGATGAGGCCAAGAAACTCTTTCAGCTCATTATTGAAAAGGGTCTAGACCCCGGTGTTGTTGGATATAATGTCATGATCAAAGGTTTCTCAAAATCTGGGATGATGGACAATGCAATTTTATGCATTGATAAAATGCGGCGTGCACATCATGTTCCTGACATATTTACTTTCTCCACCATAATTGACGGATACGTAAAACAACACAACATGAATGCTGTGCTGAAGATCTTTGGACTGATGGTGAAGCAGAACTGCAAGCCTAACGTTGTTACTTACACCTCTTTGATCAATGGATATTGCCGCAAAGGGGAAACTAAGATGGCTGAAAAACTTTTTAGCATGATGCGATCTCATGGGTTGAAGCCTAGTGTTGTGACATACAGTATACTTATAGGAAGCTTTTGCAAAGAAGCTAAGCTTGGAAAAGCTGTGTCATATTTTGAGCTAATGTTGATTAACAAATGCACTCCTAATGATGCTGCATTTCATTATCTAGTCAATGGGTTTACAAATACAAAAGCTACTGCAGTTTCAAGAGAACCAAATAATCTTCATGAAAATTCCAGATCGATGTTTGAGGACTTCTTTTCGAGAATGATAGGTGATGGATGGACGCAAAAGGCTGCTGCTTACAATTGTATTCTCATTTGCCTTTGTCAGCAAAGAATGGTTAAAACTGCCTTGCAATTGCGCAATAAAATGCTGGCTTTTGGACTTTGTTCTGATGCTGTTTCTTTTGTTGCATTGATACATGGCATTTGCTTGGAAGGAAACTCAAAAGAGTGGAGGAACATGATTTCTTGTGATTTGAATGAAGGAGAACTTCAAATTGCCTTGAAATACTCACTTGAACTAGACAAGTTCATACCTGAGGGAGGTATTTCTGAGGCTTCAGGCATTTTGCAGGCTATGATTAAGGGTTACGTGTCTCCTAATCAGGATTTGAACAATTTGAAGGAGCCAAATATGGAGAATGGTAAGGAACTGAGATAG

Protein sequence

MGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNMENGKELR

Homology

[Close]

BLAST of Cucsat.G16856 vs. ExPASy Swiss-Prot
Match: Q9SSR4 (Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX=3702 GN=At1g52620 PE=2 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.5e-119
Identity = 209/403 (51.86%), Postives = 286/403 (70.97%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           M+  G + D+++YG LIHGLVV+G +D A+ ++ ++++RG+ PDA IYN+LM+GL K G+
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
              AK++ +EMLD+NI PDA+VYATL+DGFIR G+ DEA+K+F L +EKG+   VV +N 
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGF +SGM+D A+ C+++M   H VPD FT+STIIDGYVKQ +M   +KIF  M K  
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAK-LGKA 240
           CKPNVVTYTSLING+C +G+ KMAE+ F  M+   L P+VVTY+ LI S  KE+  L KA
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 241 VSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDG 300
           V Y+ELM+ NKC PN+  F+ L+ GF    +  V  EP+  +    S+F +FF RM  DG
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705

Query: 301 WTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWR 360
           W+  AAAYN  L+CLC   MVKTA   ++KM+  G   D VSF A++HG C+ GNSK+WR
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 361 NMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIK 403
           NM  C+L E  L++A++YS  L++ +P+  I EAS IL AM++
Sbjct: 766 NMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVE 808

[Close]

BLAST of Cucsat.G16856 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 4.6e-47
Identity = 113/414 (27.29%), Postives = 200/414 (48.31%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           M  +G + + +++  LIHGL +  +   A+ + DRM+ +G  PD   Y V++NGL K+G 
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
             +A  +L +M    + P   +Y T++DG  ++ ++D+A  LF+ +  KG+ P VV Y+ 
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           +I      G   +A   +  M      PD+FTFS +ID +VK+  +    K++  MVK++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
             P++VTY+SLING+C       A+++F  M S    P VVTY+ LI  FCK  ++ + +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
             F  M       N   ++ L+ G                      M ++ F  M+ DG 
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGL--------------FQAGDCDMAQEIFKEMVSDGV 476

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
                 YN +L  LC+   ++ A+ +   +    +     ++  +I G+C  G  ++  +
Sbjct: 477 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 536

Query: 361 MISCDLN-EGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNN 414
           +  C+L+ +G     + Y+  +  F  +G   EA  + + M +    PN    N
Sbjct: 537 LF-CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

[Close]

BLAST of Cucsat.G16856 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.6e-46
Identity = 115/401 (28.68%), Postives = 205/401 (51.12%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           M+  GL+ ++ +YG L+ G    G +     + D M+  GI PD  ++++L+    K+GK
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           +  A ++ ++M  Q + P+A  Y  ++    + G +++A   F+ +I++GL PG + YN 
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 121 MIKGFSKSGMMDNA-ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 180
           +I G       + A  L ++ + R   +  IF F++IID + K+  +    K+F LMV+ 
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFELMVRI 506

Query: 181 NCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKA 240
             KPNV+TY +LINGYC  G+   A KL S M S GLKP+ VTYS LI  +CK +++  A
Sbjct: 507 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 566

Query: 241 VSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDG 300
           +  F+ M  +  +P+   ++ ++ G   T+ TA ++E               + R+   G
Sbjct: 567 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE--------------LYVRITESG 626

Query: 301 WTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWR 360
              + + YN IL  LC+ ++   ALQ+   +    L  +A +F  +I  +   G + E +
Sbjct: 627 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 686

Query: 361 NMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAM 401
           ++     + G +     Y L  +  I +G + E   +  +M
Sbjct: 687 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712

[Close]

BLAST of Cucsat.G16856 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-45
Identity = 112/406 (27.59%), Postives = 199/406 (49.01%), Query Frame = 0


Query: 9   DMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 68
           D+ +Y ALI+G      +D A  + DRM ++   PD   YN+++  L  +GKL +A  +L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 69  TEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS 128
            ++L  N  P    Y  L++  +  G +DEA KL   ++ +GL P +  YN +I+G  K 
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 129 GMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTY 188
           GM+D A   +  +      PD+ +++ ++   + Q       K+   M  + C PNVVTY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 189 TSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLI 248
           + LI   CR G+ + A  L  +M+  GL P   +Y  LI +FC+E +L  A+ + E M+ 
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 249 NKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRS-MFEDFFSRMIGDGWTQKAAAY 308
           + C P+      +VN +    AT        L +N ++    + F ++   G +  +++Y
Sbjct: 397 DGCLPD------IVN-YNTVLAT--------LCKNGKADQALEIFGKLGEVGCSPNSSSY 456

Query: 309 NCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE----WRNMIS 368
           N +   L        AL +  +M++ G+  D +++ ++I  +C EG   E      +M S
Sbjct: 457 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 516

Query: 369 CDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQ 410
           C+ +       + Y++ L  F     I +A  +L++M+     PN+
Sbjct: 517 CEFHPS----VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543

[Close]

BLAST of Cucsat.G16856 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.5e-45
Identity = 114/402 (28.36%), Postives = 202/402 (50.25%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           M+  G   + + Y  LIH L     V+ AL + + M   G +PDA  +N ++ GL K  +
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           ++ A  M+  ML +  APD   Y  L++G  + G +D AK LF  I +    P +V +N 
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 362

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHH-VPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 180
           +I GF   G +D+A   +  M  ++  VPD+ T++++I GY K+  +   L++   M  +
Sbjct: 363 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 422

Query: 181 NCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKA 240
            CKPNV +YT L++G+C+ G+   A  + + M + GLKP+ V ++ LI +FCKE ++ +A
Sbjct: 423 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 482

Query: 241 VSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDG 300
           V  F  M    C P+   F+ L++G               + E   +++      MI +G
Sbjct: 483 VEIFREMPRKGCKPDVYTFNSLISGLC------------EVDEIKHALW--LLRDMISEG 542

Query: 301 WTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWR 360
                  YN ++    ++  +K A +L N+M+  G   D +++ +LI G+C  G   + R
Sbjct: 543 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 602

Query: 361 NMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMI 402
           ++    L +G     +  ++ ++     G + EA    + M+
Sbjct: 603 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626

[Close]

BLAST of Cucsat.G16856 vs. NCBI nr
Match: XP_004152354.1 (pentatricopeptide repeat-containing protein At1g52620 [Cucumis sativus] >KGN52880.1 hypothetical protein Csa_015200 [Cucumis sativus])

HSP 1 Score: 852 bits (2200), Expect = 3.57e-305
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV
Sbjct: 469 LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV
Sbjct: 589 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN
Sbjct: 709 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 420
           MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME
Sbjct: 769 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 828

Query: 421 NGKELR 426
           NGKELR
Sbjct: 829 NGKELR 834

[Close]

BLAST of Cucsat.G16856 vs. NCBI nr
Match: XP_008454246.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Cucumis melo] >KAA0044433.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK29560.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 807 bits (2085), Expect = 1.04e-287
Identity = 402/426 (94.37%), Postives = 416/426 (97.65%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MST GLE+DMISYGALIHGLVVAGEVD ALTIRDRMMN+GILPDANIYNVLMNGLFKKGK
Sbjct: 409 MSTRGLEIDMISYGALIHGLVVAGEVDIALTIRDRMMNQGILPDANIYNVLMNGLFKKGK 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKV+L+EMLDQNIAPDAFVYATLVDGFIR GNLDEAKKLFQLIIEKGLDPGVVGYNV
Sbjct: 469 LSMAKVVLSEMLDQNIAPDAFVYATLVDGFIRLGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGFSK GMMDNAILCID+MR AHHVPD+FTFSTIIDGYVKQHNMNAVLKIFGLMVKQN
Sbjct: 529 MIKGFSKFGMMDNAILCIDRMRSAHHVPDVFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYCRKGET+MAEKLFSMMRSHGL+PSVVTY+ILIG+FCKEAKLGKAV
Sbjct: 589 CKPNVVTYTSLINGYCRKGETEMAEKLFSMMRSHGLEPSVVTYTILIGNFCKEAKLGKAV 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVS  PNNL ENSRSMFEDFFSRMIGDGW
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSGGPNNLRENSRSMFEDFFSRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           T+KAAAYNCILICLCQQRMVKTALQLRNKML+ GLCSDAVSFVAL+HGICLEGNSKEWRN
Sbjct: 709 TRKAAAYNCILICLCQQRMVKTALQLRNKMLSLGLCSDAVSFVALMHGICLEGNSKEWRN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 420
           +ISCDLNEGELQIALKYSLELDKFI EGGISEASGILQAMIKGYVSPNQDLNNLKEPNME
Sbjct: 769 IISCDLNEGELQIALKYSLELDKFITEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 828

Query: 421 NGKELR 426
           NGKELR
Sbjct: 829 NGKELR 834

[Close]

BLAST of Cucsat.G16856 vs. NCBI nr
Match: XP_038894903.1 (pentatricopeptide repeat-containing protein At1g52620 [Benincasa hispida])

HSP 1 Score: 738 bits (1905), Expect = 1.81e-260
Identity = 363/417 (87.05%), Postives = 387/417 (92.81%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MST G EVD +SYGA+IHGLVVAGEVD ALTIRDRMM RG+LPDANIYNVLMNGLFKKGK
Sbjct: 409 MSTRGHEVDRVSYGAIIHGLVVAGEVDIALTIRDRMMERGVLPDANIYNVLMNGLFKKGK 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAK+MLTEMLDQ+IAPDAF+YATLVDGFIRHGNLDEA K+FQL IEKG+DPGVVGYNV
Sbjct: 469 LSMAKMMLTEMLDQHIAPDAFIYATLVDGFIRHGNLDEAMKIFQLTIEKGIDPGVVGYNV 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGFSK GMM++AILCID+MR AHH PD+FTFSTIIDGYVKQH+M AVLK+FGLMVKQN
Sbjct: 529 MIKGFSKFGMMNDAILCIDRMRSAHHAPDVFTFSTIIDGYVKQHDMYAVLKVFGLMVKQN 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNV+TYTSLINGYCRKGE KMAEK FSMM+SHGL+PSVVTYSILI SFCKEAKLGKA 
Sbjct: 589 CKPNVITYTSLINGYCRKGEIKMAEKHFSMMQSHGLEPSVVTYSILIRSFCKEAKLGKAA 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLINKCTPND  FHYLVNGF NT A AVSR PNNLH+NSRSMFEDFF RMIGDGW
Sbjct: 649 SYFELMLINKCTPNDVVFHYLVNGFINTNAAAVSRGPNNLHDNSRSMFEDFFFRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           T+KAAAYNCILICLCQ RMVKTALQLR+KML+ GLC DAVSFVALIHGICLEG SKEWRN
Sbjct: 709 TRKAAAYNCILICLCQHRMVKTALQLRDKMLSLGLCPDAVSFVALIHGICLEGKSKEWRN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEP 417
           +ISCDLNEGELQIALKYSLELDK I +GGISEAS ILQAMIKGY SPNQDLNNL+EP
Sbjct: 769 IISCDLNEGELQIALKYSLELDKSITQGGISEASEILQAMIKGYESPNQDLNNLREP 825

[Close]

BLAST of Cucsat.G16856 vs. NCBI nr
Match: XP_022153568.1 (pentatricopeptide repeat-containing protein At1g52620 [Momordica charantia])

HSP 1 Score: 664 bits (1713), Expect = 1.91e-231
Identity = 328/415 (79.04%), Postives = 367/415 (88.43%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MS  G +VDM+SYGALIHGLVVAGEVD A+TIRDRMM RG+LPDANIYNVLMNGLFKKG 
Sbjct: 409 MSKKGHKVDMVSYGALIHGLVVAGEVDNAMTIRDRMMERGVLPDANIYNVLMNGLFKKGN 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKVML+EMLDQNIAPDAF+YATLVDGFIRH NLDEAKKLFQL IEKG+DPGVVGYN 
Sbjct: 469 LSMAKVMLSEMLDQNIAPDAFIYATLVDGFIRHDNLDEAKKLFQLTIEKGIDPGVVGYNS 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGF K GMM++A+LCID+MR A HVPD+FTFSTIIDGYVKQ ++ A LKIFGLM+KQ+
Sbjct: 529 MIKGFCKFGMMEDAVLCIDRMRSARHVPDVFTFSTIIDGYVKQCDLYAALKIFGLMLKQS 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYC KGE K+AEKLFS+M+SHGL+PSVVTY +LI S CKEAKL +A 
Sbjct: 589 CKPNVVTYTSLINGYCHKGELKIAEKLFSLMQSHGLEPSVVTYGVLIRSLCKEAKLAEAA 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLIN+C PND  FHYLVNGF N  A AVS+  NN  EN++SMFE+FF RMIGDGW
Sbjct: 649 SYFELMLINRCIPNDVIFHYLVNGFANMNAAAVSKGLNNFSENAKSMFEEFFLRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           T+KAAAYNCILICLCQ RMVKTALQLR+KML+ GLC DAVSF ALIHGICL G+SKE +N
Sbjct: 709 TRKAAAYNCILICLCQHRMVKTALQLRDKMLSLGLCPDAVSFAALIHGICLGGSSKECKN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLK 415
           +ISC L+E EL+IALKYSLELDK I +GGISEAS ILQAM++ Y SPNQDLN+LK
Sbjct: 769 VISCYLSEKELRIALKYSLELDKSITQGGISEASDILQAMVEDYESPNQDLNSLK 823

[Close]

BLAST of Cucsat.G16856 vs. NCBI nr
Match: KAF3949650.1 (hypothetical protein CMV_024509 [Castanea mollissima])

HSP 1 Score: 551 bits (1421), Expect = 2.08e-187
Identity = 260/409 (63.57%), Postives = 330/409 (80.68%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           M+  G + D++ YGALIHGL+VAGEVD ALT+R++MM +G+LPDA IYNVL++GL KKG+
Sbjct: 402 MTEGGYKPDLVLYGALIHGLIVAGEVDVALTMREKMMEKGLLPDAGIYNVLISGLCKKGR 461

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
              AK++  +MLDQN+ PDAFVYATLVDGFIR+G++ EAKKLF+LIIEKG+DPGVVGYN 
Sbjct: 462 FPTAKLLFADMLDQNVQPDAFVYATLVDGFIRNGDIQEAKKLFELIIEKGIDPGVVGYNA 521

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           +IKGF K GMM +A  C  +MR+ H+VPD+FT++T+IDGYVKQH+++  LK+FGLMVKQ 
Sbjct: 522 LIKGFCKFGMMKDAFSCTIRMRKEHNVPDVFTYTTLIDGYVKQHDLDGALKMFGLMVKQR 581

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYT+LING+C KG+T  AEK+   M+S GL+P+VVTY+ILIG FCK+ KL KA 
Sbjct: 582 CKPNVVTYTALINGFCGKGDTNRAEKILKEMQSCGLEPNVVTYTILIGRFCKDCKLAKAA 641

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           S+FELML++KCTPND  FHYL+NGF N   TA+ +E N LHE  +SMF DFF RM+ DGW
Sbjct: 642 SFFELMLMSKCTPNDVTFHYLINGFKNIAPTAIPKEGNELHEVEKSMFLDFFGRMVSDGW 701

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
            Q  AAYN I++CLCQ  MVK ALQL +KM+  G   D+VSF AL+HGICLEG SKEW+N
Sbjct: 702 VQVTAAYNSIIVCLCQHGMVKIALQLCDKMIGKGFLLDSVSFAALLHGICLEGRSKEWKN 761

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQ 409
           +ISC LNE ELQ A+KYSL+L++++P G  SEA  IL+A+I+ Y S +Q
Sbjct: 762 IISCTLNEHELQTAVKYSLKLNQYLPRGRSSEALLILEALIEDYKSNDQ 810

[Close]

BLAST of Cucsat.G16856 vs. ExPASy TrEMBL
Match: A0A0A0KTD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004900 PE=4 SV=1)

HSP 1 Score: 852 bits (2200), Expect = 1.73e-305
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV
Sbjct: 469 LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV
Sbjct: 589 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN
Sbjct: 709 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 420
           MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME
Sbjct: 769 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 828

Query: 421 NGKELR 426
           NGKELR
Sbjct: 829 NGKELR 834

[Close]

BLAST of Cucsat.G16856 vs. ExPASy TrEMBL
Match: A0A5A7TLP1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001660 PE=4 SV=1)

HSP 1 Score: 807 bits (2085), Expect = 5.04e-288
Identity = 402/426 (94.37%), Postives = 416/426 (97.65%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MST GLE+DMISYGALIHGLVVAGEVD ALTIRDRMMN+GILPDANIYNVLMNGLFKKGK
Sbjct: 409 MSTRGLEIDMISYGALIHGLVVAGEVDIALTIRDRMMNQGILPDANIYNVLMNGLFKKGK 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKV+L+EMLDQNIAPDAFVYATLVDGFIR GNLDEAKKLFQLIIEKGLDPGVVGYNV
Sbjct: 469 LSMAKVVLSEMLDQNIAPDAFVYATLVDGFIRLGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGFSK GMMDNAILCID+MR AHHVPD+FTFSTIIDGYVKQHNMNAVLKIFGLMVKQN
Sbjct: 529 MIKGFSKFGMMDNAILCIDRMRSAHHVPDVFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYCRKGET+MAEKLFSMMRSHGL+PSVVTY+ILIG+FCKEAKLGKAV
Sbjct: 589 CKPNVVTYTSLINGYCRKGETEMAEKLFSMMRSHGLEPSVVTYTILIGNFCKEAKLGKAV 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVS  PNNL ENSRSMFEDFFSRMIGDGW
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSGGPNNLRENSRSMFEDFFSRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           T+KAAAYNCILICLCQQRMVKTALQLRNKML+ GLCSDAVSFVAL+HGICLEGNSKEWRN
Sbjct: 709 TRKAAAYNCILICLCQQRMVKTALQLRNKMLSLGLCSDAVSFVALMHGICLEGNSKEWRN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 420
           +ISCDLNEGELQIALKYSLELDKFI EGGISEASGILQAMIKGYVSPNQDLNNLKEPNME
Sbjct: 769 IISCDLNEGELQIALKYSLELDKFITEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 828

Query: 421 NGKELR 426
           NGKELR
Sbjct: 829 NGKELR 834

[Close]

BLAST of Cucsat.G16856 vs. ExPASy TrEMBL
Match: A0A1S3BYA4 (pentatricopeptide repeat-containing protein At1g52620 OS=Cucumis melo OX=3656 GN=LOC103494710 PE=4 SV=1)

HSP 1 Score: 807 bits (2085), Expect = 5.04e-288
Identity = 402/426 (94.37%), Postives = 416/426 (97.65%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MST GLE+DMISYGALIHGLVVAGEVD ALTIRDRMMN+GILPDANIYNVLMNGLFKKGK
Sbjct: 409 MSTRGLEIDMISYGALIHGLVVAGEVDIALTIRDRMMNQGILPDANIYNVLMNGLFKKGK 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKV+L+EMLDQNIAPDAFVYATLVDGFIR GNLDEAKKLFQLIIEKGLDPGVVGYNV
Sbjct: 469 LSMAKVVLSEMLDQNIAPDAFVYATLVDGFIRLGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGFSK GMMDNAILCID+MR AHHVPD+FTFSTIIDGYVKQHNMNAVLKIFGLMVKQN
Sbjct: 529 MIKGFSKFGMMDNAILCIDRMRSAHHVPDVFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYCRKGET+MAEKLFSMMRSHGL+PSVVTY+ILIG+FCKEAKLGKAV
Sbjct: 589 CKPNVVTYTSLINGYCRKGETEMAEKLFSMMRSHGLEPSVVTYTILIGNFCKEAKLGKAV 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVS  PNNL ENSRSMFEDFFSRMIGDGW
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSGGPNNLRENSRSMFEDFFSRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           T+KAAAYNCILICLCQQRMVKTALQLRNKML+ GLCSDAVSFVAL+HGICLEGNSKEWRN
Sbjct: 709 TRKAAAYNCILICLCQQRMVKTALQLRNKMLSLGLCSDAVSFVALMHGICLEGNSKEWRN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 420
           +ISCDLNEGELQIALKYSLELDKFI EGGISEASGILQAMIKGYVSPNQDLNNLKEPNME
Sbjct: 769 IISCDLNEGELQIALKYSLELDKFITEGGISEASGILQAMIKGYVSPNQDLNNLKEPNME 828

Query: 421 NGKELR 426
           NGKELR
Sbjct: 829 NGKELR 834

[Close]

BLAST of Cucsat.G16856 vs. ExPASy TrEMBL
Match: A0A6J1DHT9 (pentatricopeptide repeat-containing protein At1g52620 OS=Momordica charantia OX=3673 GN=LOC111021040 PE=4 SV=1)

HSP 1 Score: 664 bits (1713), Expect = 9.24e-232
Identity = 328/415 (79.04%), Postives = 367/415 (88.43%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           MS  G +VDM+SYGALIHGLVVAGEVD A+TIRDRMM RG+LPDANIYNVLMNGLFKKG 
Sbjct: 409 MSKKGHKVDMVSYGALIHGLVVAGEVDNAMTIRDRMMERGVLPDANIYNVLMNGLFKKGN 468

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
           LSMAKVML+EMLDQNIAPDAF+YATLVDGFIRH NLDEAKKLFQL IEKG+DPGVVGYN 
Sbjct: 469 LSMAKVMLSEMLDQNIAPDAFIYATLVDGFIRHDNLDEAKKLFQLTIEKGIDPGVVGYNS 528

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           MIKGF K GMM++A+LCID+MR A HVPD+FTFSTIIDGYVKQ ++ A LKIFGLM+KQ+
Sbjct: 529 MIKGFCKFGMMEDAVLCIDRMRSARHVPDVFTFSTIIDGYVKQCDLYAALKIFGLMLKQS 588

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYTSLINGYC KGE K+AEKLFS+M+SHGL+PSVVTY +LI S CKEAKL +A 
Sbjct: 589 CKPNVVTYTSLINGYCHKGELKIAEKLFSLMQSHGLEPSVVTYGVLIRSLCKEAKLAEAA 648

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           SYFELMLIN+C PND  FHYLVNGF N  A AVS+  NN  EN++SMFE+FF RMIGDGW
Sbjct: 649 SYFELMLINRCIPNDVIFHYLVNGFANMNAAAVSKGLNNFSENAKSMFEEFFLRMIGDGW 708

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
           T+KAAAYNCILICLCQ RMVKTALQLR+KML+ GLC DAVSF ALIHGICL G+SKE +N
Sbjct: 709 TRKAAAYNCILICLCQHRMVKTALQLRDKMLSLGLCPDAVSFAALIHGICLGGSSKECKN 768

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNNLK 415
           +ISC L+E EL+IALKYSLELDK I +GGISEAS ILQAM++ Y SPNQDLN+LK
Sbjct: 769 VISCYLSEKELRIALKYSLELDKSITQGGISEASDILQAMVEDYESPNQDLNSLK 823

[Close]

BLAST of Cucsat.G16856 vs. ExPASy TrEMBL
Match: A0A7N2R4M1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 548 bits (1413), Expect = 3.34e-186
Identity = 261/409 (63.81%), Postives = 330/409 (80.68%), Query Frame = 0


Query: 1   MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 60
           M+  G + D++SYGALIHGL+VAGEVD ALT+R++M+ +G+LPDA IYNVL++GL KKG+
Sbjct: 402 MAEGGHKPDLVSYGALIHGLIVAGEVDVALTMREKMLEKGVLPDAGIYNVLISGLCKKGR 461

Query: 61  LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 120
              AK++  +MLDQN+ PDAFVYATLVDGFIR+G++ EAKKLF+LIIEKG+DPGVV YN 
Sbjct: 462 FPTAKLLFADMLDQNVQPDAFVYATLVDGFIRNGDIQEAKKLFELIIEKGIDPGVVVYNA 521

Query: 121 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 180
           +IKGF K GMM +A+ CI +MR+ HHVPD+FT++T+IDGYVKQH+++  LK FGLMVKQ 
Sbjct: 522 LIKGFCKFGMMKDALSCIIRMRKEHHVPDVFTYTTLIDGYVKQHDLDGALKTFGLMVKQR 581

Query: 181 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 240
           CKPNVVTYT+LING+C KG+T  AEK+F  + S GL+P+VVTY+ILIG FCK+ KL KA 
Sbjct: 582 CKPNVVTYTALINGFCGKGDTNRAEKIFREIPSCGLEPNVVTYTILIGRFCKDCKLAKAA 641

Query: 241 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 300
           S+FELMLI+KCTPND  FHYLVNGF N   TA+ +E N L +  +SMF DFF +M+ DGW
Sbjct: 642 SFFELMLISKCTPNDVTFHYLVNGFANIALTAIPKESNELQKVKKSMFLDFFGKMVSDGW 701

Query: 301 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRN 360
            Q  AAYN I+ICLCQ  MVK ALQL +KM+  G   D+VSF AL+HGICLEG SKEW+N
Sbjct: 702 VQVTAAYNSIIICLCQYGMVKIALQLCDKMIGKGFLLDSVSFSALLHGICLEGRSKEWKN 761

Query: 361 MISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQ 409
           +ISC LNE ELQ A+KYSL+L++++P G  SEA  IL+A+I+ Y S +Q
Sbjct: 762 IISCTLNEHELQTAVKYSLKLNQYLPRGRSSEALLILEALIEDYKSNDQ 810

The following BLAST results are available for this feature:

BLAST of Cucsat.G16856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSR4	4.5e-119	51.86	Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX...	[more]
Q9SXD1	4.6e-47	27.29	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q76C99	6.6e-46	28.68	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]
Q9SR00	2.5e-45	27.59	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9FMF6	9.5e-45	28.36	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]

BLAST of Cucsat.G16856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152354.1	3.57e-305	100.00	pentatricopeptide repeat-containing protein At1g52620 [Cucumis sativus] >KGN5288...	[more]
XP_008454246.1	1.04e-287	94.37	PREDICTED: pentatricopeptide repeat-containing protein At1g52620 [Cucumis melo] ...	[more]
XP_038894903.1	1.81e-260	87.05	pentatricopeptide repeat-containing protein At1g52620 [Benincasa hispida]	[more]
XP_022153568.1	1.91e-231	79.04	pentatricopeptide repeat-containing protein At1g52620 [Momordica charantia]	[more]
KAF3949650.1	2.08e-187	63.57	hypothetical protein CMV_024509 [Castanea mollissima]	[more]

BLAST of Cucsat.G16856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTD1	1.73e-305	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004900 PE=4 SV=1	[more]
A0A5A7TLP1	5.04e-288	94.37	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BYA4	5.04e-288	94.37	pentatricopeptide repeat-containing protein At1g52620 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DHT9	9.24e-232	79.04	pentatricopeptide repeat-containing protein At1g52620 OS=Momordica charantia OX=...	[more]
A0A7N2R4M1	3.34e-186	63.81	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 306..334 e-value: 0.0061 score: 16.7 coord: 11..41 e-value: 6.7E-4 score: 19.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 306..338 e-value: 1.0E-5 score: 23.4 coord: 82..113 e-value: 8.9E-7 score: 26.7 coord: 221..254 e-value: 1.3E-7 score: 29.4 coord: 11..45 e-value: 2.2E-7 score: 28.6 coord: 186..220 e-value: 1.0E-10 score: 39.1 coord: 47..80 e-value: 7.0E-7 score: 27.0 coord: 151..185 e-value: 1.5E-8 score: 32.3 coord: 118..150 e-value: 8.7E-7 score: 26.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 43..91 e-value: 2.3E-10 score: 40.5 coord: 183..232 e-value: 2.2E-19 score: 69.4 coord: 113..162 e-value: 2.1E-12 score: 47.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 219..253 score: 10.413293
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 184..218 score: 14.249747
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 44..78 score: 10.796938
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 149..183 score: 10.961357
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 79..113 score: 12.298636
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 114..148 score: 10.183105
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 9..43 score: 10.98328
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 72..165 e-value: 4.4E-27 score: 96.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..71 e-value: 2.2E-15 score: 58.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 166..284 e-value: 5.2E-32 score: 113.5 coord: 285..374 e-value: 1.3E-10 score: 43.2
None	No IPR available	PANTHER	PTHR47938:SF15	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..407
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 1..407
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 44..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16856.T3	Cucsat.G16856.T3	mRNA
Cucsat.G16856.T4	Cucsat.G16856.T4	mRNA
Cucsat.G16856.T2	Cucsat.G16856.T2	mRNA
Cucsat.G16856.T5	Cucsat.G16856.T5	mRNA
Cucsat.G16856.T1	Cucsat.G16856.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
biological_process	GO:0000963	mitochondrial RNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding
molecular_function	GO:1990825	sequence-specific mRNA binding