Cucsat.G16831 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16831
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transmembrane protein
Location	ctg24: 1783699 .. 1786355 (-)
RNA-Seq Expression	Cucsat.G16831
Synteny	Cucsat.G16831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATCAAATTTCAAAAGGTAAATCAATAACAAATTGAATATGAGGCTGATTATGTAATATATTACCCTTTCTTTGGTGCACCAATCTATGGAAAAATTGGGTGTTTGTAATTTGTGAAGTGAGAACTTATCAAACAAAACAGGCAAAGCGTTGGACCAAAAAAATGGGAGCGGGAATGGAGGAAGACGATGATCCATGGTTAGCTCCCGATAAGTTCTACCATTTCCTTCTCTGTTTCTCTCTCACGATCCTCTTCGCTTCATTCGCCCTTCACACCCGCTATCCATTCATCCGTCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTTGCCGGAGCCGCCAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCCGCCGGAGCCTCCACCAGGGATGCTGTTGCCGACTTTATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCTCTCAGATTCTCGATCCGCAGCGGCGGCGGCGGCGGCGGCAAAGAAGCTTGCCCTAATCGGGACATTTTAATGGTCTGAAATGATATGGGAGGGTTTTCTTTTCTGCTACTGATGGAGGAATGAGTCGACGTTTTACTTTGATCAAAGGGATTCGTTTGAGGTGAATTTTAACGTGGTTTCGTTTTCTTTATTCTGATGAGAATGTTTTATATTTGGGTTGTGGACTTCATTTCCTGAGATTCTCTGGCATCATTCTTCATTGGATTGGTTTCAGCTTGCTTGTTTTCATTGGAATTGTTGAAGAGATGTTCAATTTCATTACGGTGTCATTAATATTTTTAGTTAGAGAGTGTAAATTAAGAAAGGAGGAGTAGATCACTTCTTATTGTAGTACATTTTGTATCTATGCAGATTTAAGTGCTGAGTTTACGATGTGCTTAATAGATTTTGTTAGGTGATTGGAATATAGCATCAAAGGATCTTCAAGGTTTATCTAATTTTTCCTTCCAAATTTGAGTAATAATGATATCACCAGGCTCTTTATAACATCCTTCAAGATTTTTTTCCTTGTTTTTGACAATTAGATGTTGTAGGGTCAGATTAGTGATCACCCTTTCTTCGACCTGTGTCAACGTGCTTGCTTATCTGTGTTAATATGCTTGCTTGTGTGTTGACGTCCTTCCTCTACTGCATGTTGATGTGCTTGCTTTAGTCATGTTGACGTACCTGCTGCACCAACTTTGCTGTGTCAAATGACCTACGTTCCCTAAAAGCCCATTGTATAGAGAAATCGCTATAATCTCACTAGATAATCTTTTTGTTGATTTTTGGAAATTGTGCTGGTTTCCTCACAATTTTTTTTCTAAATGGTTTTCATCTTTCTTGAGGAAACATTTATATTCATAGCCTCTTTCATCCGCCTTTTAGGTAGAAAGGTCTCTTCTTGTGGTTAGGCGTGTTAACTTTATTGTGGGATCTCTAGGGAAAGATTAATAGGGTTTTTAGAGGAGTTGATAGGGACTCTAGTGATGTTTGATCCCTGGTGACGTTTTATGTTTCTCATTAATTTTCGATTTCAAAGACTAATTAATCCATAGGTGAGGTTGAACGTGGTTGGTTATTTTTTTTTTTAAAAAAAGGTCTTTTAAGTACAACTTGGGGTAGAGGGATTTGAACTCGGAATCTCTTGTTCTCAAGAAAGATGCTGAGAGCTCATGTTGACAATTTGGTTATCTTTTCTCTAGGTTTTTTTTTGCCGGACTTGTTCTTTTTTTTGTATCCCTTTGTATTTTCTTTTCAATATTTCTATAAATGAAGAAAAATAAATATTGTCATAGCCAAATTCTAAAAACAAATTTAAAAGACTGTTGTTTGTAGTTCTTAAAATTTGGGTTATGACTTGGAAACATTCATAAAAAGGATTTCAAAAAACTAGAAATCAAATGGTTAGGGAGATAGGCCATGGTTTTCTAGTTACTACCTGAATTGAGTTTACAATTCAACTGCTATAGTTTCATTTCTAGATTACAAAGACAATTATTAGGCAGTTTCTTTTCCTTTTGGTTAAGAACTGGAAATCCTTTGGTTAACTATCATACACACAATGACCAATACTTGCAGCCTATCCATACACATTGTTCTGTTGCGTATTTACTACTGATACTGAACATACATTTGGTTTCATTTTTCCATCTCATCCATCTTTCTGATTTAGAATGTCTCAAGGATCTAAGGTTCAACATGTTCTCTGGGTTATTTAGGTAGGTAGGTTGGGCGATGGATCAGTTGTCATCGTCGAAAGCTTGCTGCAGTAGAAGGCAAGCGTGAATCACCATCTTTGTCAGGCAACTTAACTGCAGTGTAGATTCCAGCTCCACACAATGTCCCTAATATGGGAGCTGTGAGGTAAATCCATATGGCTTTGAAATTGTTTACTGCAATGGCTGGCCCCAGTGTTCTTACTGGATTCATTGAAGCTCCAGTTGTTTGTCTGTTACATAATTAAAATGAAAAGCTTTTTAGTTTGTTTGTTGTTTAATGGAGGTATATAGGGTAACATTTGTTCATAAGATAAGGCTCTAAATTACGGTTTCCTTTCTGAAACAGTAGCCACTTTGTTCACGTCTACATTTTGAAGAGAAAACTATTACTATGAGTTGGATGAATCATTACCCGTTTGTAATCATTAAATCTCTATACTT

Coding sequence (CDS)

ATGGGAGCGGGAATGGAGGAAGACGATGATCCATGGTTAGCTCCCGATAAGTTCTACCATTTCCTTCTCTGTTTCTCTCTCACGATCCTCTTCGCTTCATTCGCCCTTCACACCCGCTATCCATTCATCCGTCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTTGCCGGAGCCGCCAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCCGCCGGAGCCTCCACCAGGGATGCTGTTGCCGACTTTATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCTCTCAGATTCTCGATCCGCAGCGGCGGCGGCGGCGGCGGCAAAGAAGCTTGCCCTAATCGGGACATTTTAATGGTCTGA

Protein sequence

MGAGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV

Homology

[Close]

BLAST of Cucsat.G16831 vs. NCBI nr
Match: XP_011653000.1 (uncharacterized protein LOC105435165 [Cucumis sativus] >XP_011653001.1 uncharacterized protein LOC105435165 [Cucumis sativus])

HSP 1 Score: 236 bits (602), Expect = 2.91e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 5   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 64
           MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV
Sbjct: 1   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 60

Query: 65  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV
Sbjct: 61  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 118

[Close]

BLAST of Cucsat.G16831 vs. NCBI nr
Match: KAE8649070.1 (hypothetical protein Csa_014719 [Cucumis sativus])

HSP 1 Score: 243 bits (621), Expect = 8.97e-78
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MGAGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGA 60
           +GAGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGA
Sbjct: 239 VGAGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGA 298

Query: 61  AKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDIL 120
           AKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDIL
Sbjct: 299 AKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDIL 358

Query: 121 MV 122
           MV
Sbjct: 359 MV 360

[Close]

BLAST of Cucsat.G16831 vs. NCBI nr
Match: XP_008454165.1 (PREDICTED: uncharacterized protein LOC103494650 [Cucumis melo])

HSP 1 Score: 221 bits (563), Expect = 1.03e-71
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MGAGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGA 60
           +GAGMEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGA
Sbjct: 41  IGAGMEEDDDPWLAPDKLYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLCAGA 100

Query: 61  AKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDIL 120
           AKEVADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS GG   KEACPNRDIL
Sbjct: 101 AKEVADELGFFKSAGASTRDAVADLIGVLLASFLLHALRFSIRSSGGD--KEACPNRDIL 160

Query: 121 MV 122
           MV
Sbjct: 161 MV 160

[Close]

BLAST of Cucsat.G16831 vs. NCBI nr
Match: KAA0044487.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK29614.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (544), Expect = 1.91e-69
Identity = 110/118 (93.22%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 5   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 64
           MEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGAAKEV
Sbjct: 1   MEEDDDPWLAPDKLYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLCAGAAKEV 60

Query: 65  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           ADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS GG   KEACPNRDILMV
Sbjct: 61  ADELGFFKSAGASTRDAVADLIGVLLASFLLHALRFSIRSSGGD--KEACPNRDILMV 116

[Close]

BLAST of Cucsat.G16831 vs. NCBI nr
Match: XP_038890690.1 (uncharacterized protein LOC120080188 [Benincasa hispida])

HSP 1 Score: 203 bits (516), Expect = 9.78e-65
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 3   AGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAK 62
           A ME+DDDPWLAPDK YHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SLFAGAAK
Sbjct: 31  AQMEDDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAK 90

Query: 63  EVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           EVADELGFFKSAGASTRDA+AD IGVLIASFLLH LRFSIRS    G KEA P+RDILMV
Sbjct: 91  EVADELGFFKSAGASTRDAIADLIGVLIASFLLHTLRFSIRS---SGDKEASPDRDILMV 147

[Close]

BLAST of Cucsat.G16831 vs. ExPASy TrEMBL
Match: A0A0A0KYM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007020 PE=4 SV=1)

HSP 1 Score: 236 bits (602), Expect = 1.41e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 5   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 64
           MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV
Sbjct: 1   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 60

Query: 65  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV
Sbjct: 61  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 118

[Close]

BLAST of Cucsat.G16831 vs. ExPASy TrEMBL
Match: A0A1S3BXG6 (uncharacterized protein LOC103494650 OS=Cucumis melo OX=3656 GN=LOC103494650 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 5.01e-72
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MGAGMEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGA 60
           +GAGMEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGA
Sbjct: 41  IGAGMEEDDDPWLAPDKLYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLCAGA 100

Query: 61  AKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDIL 120
           AKEVADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS GG   KEACPNRDIL
Sbjct: 101 AKEVADELGFFKSAGASTRDAVADLIGVLLASFLLHALRFSIRSSGGD--KEACPNRDIL 160

Query: 121 MV 122
           MV
Sbjct: 161 MV 160

[Close]

BLAST of Cucsat.G16831 vs. ExPASy TrEMBL
Match: A0A5A7TRK6 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002250 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 9.27e-70
Identity = 110/118 (93.22%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 5   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 64
           MEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGAAKEV
Sbjct: 1   MEEDDDPWLAPDKLYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLCAGAAKEV 60

Query: 65  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           ADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS GG   KEACPNRDILMV
Sbjct: 61  ADELGFFKSAGASTRDAVADLIGVLLASFLLHALRFSIRSSGGD--KEACPNRDILMV 116

[Close]

BLAST of Cucsat.G16831 vs. ExPASy TrEMBL
Match: A0A6J1G9C8 (uncharacterized protein LOC111452136 OS=Cucurbita moschata OX=3662 GN=LOC111452136 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 7.63e-62
Identity = 97/118 (82.20%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 5   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 64
           M++D+DPW APDK YHFLLCF+LT+ FA+ A  TRYPFIRRHSI+IGSVLSLFAGAAKEV
Sbjct: 1   MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEV 60

Query: 65  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           ADELGFFKSAGASTRDAVAD +GVLIASF LHALRFSIR    GGGKEA PNRDILMV
Sbjct: 61  ADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR---GGGKEASPNRDILMV 115

[Close]

BLAST of Cucsat.G16831 vs. ExPASy TrEMBL
Match: A0A6J1K872 (uncharacterized protein LOC111492582 OS=Cucurbita maxima OX=3661 GN=LOC111492582 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 2.55e-60
Identity = 96/118 (81.36%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 5   MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEV 64
           M++D+DPW APDK YHFLLCF+LT+ FA+ A  TR+PFIRRHSI+IGSVLSLFAGAAKEV
Sbjct: 1   MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRHPFIRRHSIMIGSVLSLFAGAAKEV 60

Query: 65  ADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEACPNRDILMV 122
           ADELGFFKSAGASTRDAVAD IGVLIASF LHALRF IR    GGGKEA PNRDILMV
Sbjct: 61  ADELGFFKSAGASTRDAVADLIGVLIASFFLHALRFLIRR---GGGKEASPNRDILMV 115

The following BLAST results are available for this feature:

BLAST of Cucsat.G16831 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G16831 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653000.1	2.91e-78	100.00	uncharacterized protein LOC105435165 [Cucumis sativus] >XP_011653001.1 uncharact...	[more]
KAE8649070.1	8.97e-78	99.18	hypothetical protein Csa_014719 [Cucumis sativus]	[more]
XP_008454165.1	1.03e-71	92.62	PREDICTED: uncharacterized protein LOC103494650 [Cucumis melo]	[more]
KAA0044487.1	1.91e-69	93.22	putative transmembrane protein [Cucumis melo var. makuwa] >TYK29614.1 putative t...	[more]
XP_038890690.1	9.78e-65	86.67	uncharacterized protein LOC120080188 [Benincasa hispida]	[more]

BLAST of Cucsat.G16831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYM1	1.41e-78	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007020 PE=4 SV=1	[more]
A0A1S3BXG6	5.01e-72	92.62	uncharacterized protein LOC103494650 OS=Cucumis melo OX=3656 GN=LOC103494650 PE=...	[more]
A0A5A7TRK6	9.27e-70	93.22	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1G9C8	7.63e-62	82.20	uncharacterized protein LOC111452136 OS=Cucurbita moschata OX=3662 GN=LOC1114521...	[more]
A0A6J1K872	2.55e-60	81.36	uncharacterized protein LOC111492582 OS=Cucurbita maxima OX=3661 GN=LOC111492582...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35462	FAMILY NOT NAMED	coord: 5..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16831.T1	Cucsat.G16831.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane