Cucsat.G16802 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAGAAACGCTCAATGAATATAAACCCTAAACGTGAGTCATCGCCTTATACTCACCGAGTCACGCTGAACTTCCTCTTCAGCGAACGAGTCACGCCCCCCATCTTCTTCGACCAAGACCCTACGTTTGCCCTAACTCTTCGCCGCTCCTTGACGCCGTCGGTCAGTTTCAACCCTCTGTTTTTGTCCTCTCTCTCTCTACACACACACACACACACGTAGTTTATAATATCGAATTCGTTTCTGCTTTTATCGGGTTTTAGAGTGGCTTTGTAATCTGGTTGTTGATTTTTTTCTTATTCTTTCAATACAAACAATGTCGTTGATAGAATGTTAGCACTCCTAGTTCTTGGCTGCCTCTAATTCCATGGATAAGTATAGGTTAAAGTAAGTTTATGTGCAAGGCATTGTATATTTCCAAATGCACTTGTCAAGTTGATCTTCTTATTCAATTTTGCCTATATGGGCTGCTGGGTTTCTTATCTGTCTGTCGATGTTGGAGTTGGCTTTCCCTCCCTTGGTTAGTTTCCCATTTTTTGTCCTCATCACATGGCTGTTTTTTCTCATAGTTTCAGACGCTAAGGTGTTTGGAGTTTCGTTCCAAGCCATTTTATTCCGGGTTGTATTTGCTTTTATTTTCTTGTTTAGTTCAGTTATGGGCTATATTTGGTTGTATTTTTGTTATTTTGCTTTCATTTCATCGAAAAGCTCTTTTTTTTTTTAAAAAAAATAATAATTTGGGAGGGCCGTAAGCTAACCCTGTTAATTTTCTTGCATACGAAAACCTTGTATATCCTTTCTCGTACTTAATTTGAATCTGCAGAACCCATGTCAGATATTTTACTTAATATATTGATGTGTTCTTGCTTTGAAATATTTGTTCTTTAATTCCTGTATTCACTCCTCGATATGAATGTAAAATCGTTTACGCACGGACTTCATCCACTGCTTGACTATAACAAATGTCTTTTCACTCCACTTCTCTATTTGATGTGAATCTCCAACCTGGCTCTAACTCAGTTATGATGAGTGCTTGTCACAGAGATGTCAATGCTACGATTGAGGAGTCCTTCCTCAATCTGTCTTTTGGAAAGAAAGCCGTTTCTTTGGCCTGCCGACGTGTGTGCGGTGTTATGAGTCTTGTGGGATGAGAGGAACAGTAAGATGTTTAGGGTTGTGGAGAGGGACCCTAGGAAGCTTTGGGTCCCTTGTTCATTTTCATATTTCTCTTTGGGCTTCAACTTCAAAGACTTTTTGTAATTTTTCTGTAGGAGTGGTTTTGCATAGTTTAAACAGTCCTTGTAAAGGGTACCCTGCCTTTCTGTTGACTTGGTTTTTTTGTATGTCCGTGCATTCTTTCATTTTTTCTCACTGAAAGTGGTTATTTTCATTTAAAAACCCAGTGGGTTGCCTCCCCATTTACACCGAATGTTTAACACAGTTCTTATTTTTCAATCTTTTGCTTTGAAACCTGGCTTCCATTCACTAATGCGGTTCTTTTTTTGGCTGGTCTGGTCTGTTCTCTGATGGTCATACATTTTCTAGCACTGCTGGTTAATTTCTATTATTGCCCTGTTAATTTACAGGTTAGCGTTAACTTTTTGACAACAAAACTGCTGTTGAAGGATGGTTGAGCTTCTGTTTGACGATATTTTTAAGATTGAGCGATTAAACCCTGATGGTAAAAAGTTTGATAAAGGTACATTTTTGTATAGTAGTCACTTTCATTTCATTTATACAATATTTCCAGGAATGCTTATTAGCAGACTGTGGCAGTTTTATTGTTATATATCTGTAAAATCATTGTGCCATTCTTTAACTTTCTGATGGCGGTTGGAGATGTACTTCGTAGGCCTTTAAATCTCATCCATTCCTTATTTATTAACTTTTTAGAGGTTTCCTTTCAATCAGTTAGGATATCATCTGGAATATTATAACTCCATGTAAAATATGTGTTAAAAAAACTTTTCAACATATTTATGACATATTTTTTCACAATCTGTCCAACAGTTACTCGAATAGAGGCAAAGAGCGAGAAGTTTGACATGTTCATGCATCTAGATATAAATTCAGAGATATACCCCCTGAAAGAAGGTGAGAAGTTCTCGATGGCACTAGCTCCAACTCTGAATCTTGATGGAACCCCTGACACTGGATATTTTCTTCAGGTAACTTGTTCTTCTATTGATTTTAATCTGTTGCACACTGGATTTAACGTGGTGGTGTTGGTAAGAAAATGATGTCCTGGTAGGTTGAAGGATTTAGGCCTTGTTTGGCAACTTTTTAGGCCCTGTTTAGTAATCATTTGGTTTTTAGTTGAAAATTATGACTATAGACTTCAATTCCACATCTAAATTTATTGCTGTGTTATCTGCATTTTACAAGTATTTTTAAAAAGTGAAGCCAAAATTTGAAAACATGGAAAAGTAGTTTTTAAAAACTAAGAAATTGAGGGGAAAAGTTTAATTTTCAAAACTCAAAAACAAAAAGCGAAATAGAGTCTGAGTTTTTAGTTATTTGTTTTTGAAAATCTTATAAATATCCCTTTGTCCTCTAAAAAATTTGTTATCTACATTAAAACCAAGCGTAAATTTGAGAACTAAAAAATGTAGTTTTAAAAAACTTGTTTTACTTTTTAGAATTTGATTAAGAATTCAACTCTTAAGAAAAATATAAACCATTGCAAGAAATTGAGAGGAAGTAAGCTTAATCTTAAGAAACAAAAACTGAATAGTTACCAAATGGGGTCTTAGTAGTCCATTTTGTCATAAACTACTATATTTGAAATATCACTTTGAACATTAATAGGGAACAAGAAACTTTCAATCTGCTAGGAAATATATGCTTTCCATAGTTATTGCATATGTCAAGACTGGTCTTCATTGTTTTCCGACAACTATATTTGGTCTTGAGCATTTTCGACACTTGAATATGTCTACTTAACAATCATTAGGCTGCATAACAGGGCAATCGGAAGTCTCTTGCAGACAGATATGAATATGTCATGCAAGGGAAGCTGTTCAGAATTTCAGAAAGTTCTGGCCATGGCGGAAAAGCGTACGTGCTATAACTTCTCGAAACAATTTTAATGTGACACTTTAATTCCACTGTATGAGCATTAGAGAACCGAGAGCTTGGCATTGCCAAACTATACTTATCTAAATTTGAGCAAGAACCTGTCACGGTGCATTCTCCTGTCTATAATGGCTACAGAAGTGTATTGCGTGTGAATAAAATTCATGTTAGTTTCTTTTCCTGAACTGTAGGAACATATATATATTTATTCTAGTAGAATTGTTATCTAAAAAACTATATTTCATCTGAATCTAGTGAAATAGATGCTTCTTTTGGTGGACTTTTGATGATGCTGAAGGGAGACCCCTCACATTGCAGCAAGTTTGAACTTGACCAGAGGCTATTTCTTCTCATCAGGAAGGTGTGAAGCGCTTTCATTTGATTTGAACTCTAATGACTTGCTACAAAAGCTCTGGACATCTCTTATCGCTATTAGAACTGTGAATGTTTAGAAATATGTATTGTTAGAATCAAATTTCTATCTGTATCTGATTAAAGACTGGGCAGTGATCTTATCTTCTGAACTAAATTGATATCTTGCCTATAATGTCATGAATAGTGGCAGAACCTTTCGAGTTCTCGAAAGCGGAGTTTGAGCATGGTAGTATGTATAGTTTGTAGTGTTGGGCGGCCAACCTGAACAATTTTGGCAAGCTTGATTCCATTGCAGTTTGGGAGGGTGGAGACTGGCTAATGAAAGATTTAATAAATTACAAACATATTTAAGTGGGTGTGAGATTTGAATTTCTCACCTCAATGTTGCTATTAAACGTCTTTGAGATTTATTTCGTTGGTCTCTAGATTGTCATTATTTTTGTGGATGGAAAGTATATTTTCT ATGGTTGAGCTTCTGTTTGACGATATTTTTAAGATTGAGCGATTAAACCCTGATGGTAAAAAGTTTGATAAAGTTACTCGAATAGAGGCAAAGAGCGAGAAGTTTGACATGTTCATGCATCTAGATATAAATTCAGAGATATACCCCCTGAAAGAAGGTGAGAAGTTCTCGATGGCACTAGCTCCAACTCTGAATCTTGATGGAACCCCTGACACTGGATATTTTCTTCAGGGCAATCGGAAGTCTCTTGCAGACAGATATGAATATGTCATGCAAGGGAAGCTGTTCAGAATTTCAGAAAGTTCTGGCCATGGCGGAAAAGCTGAAATAGATGCTTCTTTTGGTGGACTTTTGATGATGCTGAAGGGAGACCCCTCACATTGCAGCAAGTTTGAACTTGACCAGAGGCTATTTCTTCTCATCAGGAAGGTGTGA MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMALAPTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISESSGHGGKAEIDASFGGLLMMLKGDPSHCSKFELDQRLFLLIRKV Homology
BLAST of Cucsat.G16802 vs. ExPASy Swiss-Prot
Match: Q9M1A8 (DNA-directed RNA polymerases II, IV and V subunit 8B OS=Arabidopsis thaliana OX=3702 GN=NRPB8B PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26 Identity = 49/72 (68.06%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy Swiss-Prot
Match: O81097 (DNA-directed RNA polymerases II and V subunit 8A OS=Arabidopsis thaliana OX=3702 GN=NRPB8A PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.2e-26 Identity = 50/72 (69.44%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy Swiss-Prot
Match: A8XT81 (Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Caenorhabditis briggsae OX=6238 GN=rpb-8 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 5.4e-15 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy Swiss-Prot
Match: Q19826 (Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Caenorhabditis elegans OX=6239 GN=rpb-8 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.2e-15 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy Swiss-Prot
Match: P52434 (DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Homo sapiens OX=9606 GN=POLR2H PE=1 SV=4) HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14 Identity = 35/75 (46.67%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of Cucsat.G16802 vs. NCBI nr
Match: XP_004152137.1 (DNA-directed RNA polymerases II and V subunit 8A [Cucumis sativus] >KGN53006.1 hypothetical protein Csa_014470 [Cucumis sativus]) HSP 1 Score: 159 bits (402), Expect = 8.38e-48 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Cucsat.G16802 vs. NCBI nr
Match: XP_008454076.1 (PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Cucumis melo]) HSP 1 Score: 159 bits (401), Expect = 1.19e-47 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Cucsat.G16802 vs. NCBI nr
Match: XP_038879439.1 (DNA-directed RNA polymerases II and V subunit 8A-like [Benincasa hispida] >XP_038879448.1 DNA-directed RNA polymerases II and V subunit 8A-like [Benincasa hispida]) HSP 1 Score: 155 bits (393), Expect = 1.96e-46 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Cucsat.G16802 vs. NCBI nr
Match: XP_022972118.1 (DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita maxima] >XP_022972119.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita maxima]) HSP 1 Score: 154 bits (390), Expect = 5.62e-46 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Cucsat.G16802 vs. NCBI nr
Match: XP_022932746.1 (DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita moschata] >XP_022932747.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita moschata] >XP_023538873.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita pepo subsp. pepo] >XP_023538874.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154 bits (390), Expect = 5.62e-46 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy TrEMBL
Match: A0A0A0KYV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011050 PE=3 SV=1) HSP 1 Score: 159 bits (402), Expect = 4.06e-48 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy TrEMBL
Match: A0A1S3BXS2 (DNA-directed RNA polymerases II and V subunit 8A-like OS=Cucumis melo OX=3656 GN=LOC103494598 PE=3 SV=1) HSP 1 Score: 159 bits (401), Expect = 5.76e-48 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy TrEMBL
Match: A0A6J1I8Y6 (DNA-directed RNA polymerases II and V subunit 8A-like OS=Cucurbita maxima OX=3661 GN=LOC111470753 PE=3 SV=1) HSP 1 Score: 154 bits (390), Expect = 2.72e-46 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy TrEMBL
Match: A0A6J1EXM3 (DNA-directed RNA polymerases II and V subunit 8A-like OS=Cucurbita moschata OX=3662 GN=LOC111439203 PE=3 SV=1) HSP 1 Score: 154 bits (390), Expect = 2.72e-46 Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Cucsat.G16802 vs. ExPASy TrEMBL
Match: A0A6J1CWD5 (DNA-directed RNA polymerases II and V subunit 8A-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015176 PE=3 SV=1) HSP 1 Score: 153 bits (387), Expect = 7.79e-46 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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