Cucsat.G16791 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16791
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionZinc finger protein CONSTANS-LIKE 15-like
Locationctg24: 1192753 .. 1194182 (-)
RNA-Seq ExpressionCucsat.G16791
SyntenyCucsat.G16791
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGTGAACAATAAAAGTAGGATTAAATTGAAGATTTATATTGGGAGTAAAGCTGAGAGGACCAAATAATAAAATAAAAGTAAAAGAGGGGTGATAGGAAAATATGAAAATAAAAAAGAAAGAAAAAGAGAATTCGTCACTATCATAAAGATTTGTCATAAGATATATTTTTCATGGAAGGGGAGGTGAAATGACGAAAAGGGGTATGAAAGATGGAACGGCAGATCTGCTGCTGCTAGTTCATCCCCCATTTTCGATTGGGATCAGGATATTCTGCCGCTACCGGCCAAACCTCCAGTTGAGATCAACAACAATCTTCAATTTCTCCTTGTACCCACCGATCAAACTTTCCTATTAGGGTTTTTTTTTTTTTTGTTTGTCCCTTTTTCTTTTCTGGGTTCTTCTCCGCTCCACGAAGAAATGGTCTGTTCCAAGTCCACAACAGGGGAGACCGTCCCCTGTGATTTCTGTAACGACCAAGTTGCGATTCTCTACTGTAGAGCCGACTCTGCTAAGCTTTGTTTGTTCTGCGACAAGCATGTTCACTCTGCCAATTTACTCTCTCGGAAGCATGTTCGTTCTCAGATCTGTGATAACTGTAGGTCTGAGCCGGTTTCAATTCGCTGTTCAACGGATAATCTCGTCCTCTGTCAGGAGTGTGATTGGGATGCTCATGGAAGCTGTTCGGTCTCTGCTGCCCACGATCGAACTCCGATTGAAGGTTTCACTGGCTGCCCTTCTGCACTTGAGCTTGTTTCTTTATGGGGTTTCGATCTTGGAGATAAGAAGCTGGAGGAATCTGAGATGTTGGTGCAGAATTGGGTCTGTTCACAGGATTTGGTTATGCCGATTGATTCTTGGGCTTCTAGAGCTAGTGCGACCGCCTTTAACGACCTCATTGTTCCGAATGATAACCCCTTTCTCTTTGCGAATCTGAACTGTACGGATGCTGCTTCGATGTTCAAGAAGCAGAGTCCGAGCTGTGGAAAGCATAAGCAAGTGATTTACAAGCAGTTGGTTGAGCTGCTTAAGAGGGATTTCGAAGGTGGAGACGATGTTGAGGGCGATGACACTCGAGATGGTGATGCAGGTGGGGAAGATGTTGGATTACAGAGTATGGTTCCTGAAACAACGAATGGGGATTGTTATTGGCAAGGGGATTTGGAAGGTCGTCAAATTTCAAAAGAAGATGATGGGGTTTTTGTTGGTGCTGCTCCTCCTCCATTACTGCAACAACAAGCTTCATTCACGTCTCTGCTTACGATGCCGTCCCATGTGGGTTTGAAAGATAACGAGCGCTCTGTTGATGAAACTGGTGTATGGGACAGTAGCCCAAATCGTCAAAGCACTCAAGTAATTTTTTCAATTACTTTTCCTTGTTTCTCTCTGTTTCAACTTTATCAATCTTCAGCTTTTTGTGTCATGCGCATATATATCGTAGTTTGATAACTGTAACATATCACTCTGTACCAAATATGTTTTCTTTTGTGTTTGTCCCGTTTATTCTTTTCCCCAATTCCGAGGAATTGAGTTCGTACATCGTTTGCCAGTCAATTGGTTTAACCTTCAAAAGTAGTTCAGTCATTTTCTGAGGATATGAATGGCCAGTAGATAGGCAACTGTGTTCTTTCTTCTAGACCCTCTTTCTGATTTCTGGTGATACTCCTCTTTGTTGACATGCTTGTTGTGTAGAATCAAATCCTCTTTTTTCTCCTTTTGACACAAAGTTTGGTGCATTATCTGTTCCTAATCTGGGATAGTACTTGCTTGTAGTTAATTGAAAATTCCCAGGAGTTCTGTTGTTTTCTCTTTTTGTTTGGAATCTGATTTAATATTTATCCTATAAACTCTTTCATGATAGTTAATGCTTGATGTCTCTGGTTTATCTATTTTATCATTCTCAAATGAAGCTTAAATACATGTAATGCTAATGCCTTACCACTTCTGTATCCACTTTTTCTAGATTTGGGATTTCCATTTAGGACGGTTAAGGGGACACAAAGATTCAAATACGTTTGACGACGCTTATGGCACAGGCGACATGGGATTTACCATTAAAAATTTTGGTGAGTTTTTGAAAGAAACATCCCCCACAAGCGCGAAGTTGCTAGGAGAAACCTATCAGATCAATTGCTCTAGCGTTCATGATGATATACCATCATTCAATGTAAGTCCTCCTCTGTCTTTTCTCTTCAAGCATGTTCCTTATTGTTTATTCGTGGTTCCCTTGAAGAGAATTTTCCATCTAATTGTGTTCCCCTACTTGAAGACATATCTGATATCTATATTTGAGGAGTTTCAAAGACATCATGGATGAAATTAAATTTATTTATCAAAGTATGTGAAAGTCATCTAAACTAGACCATTAGTTGTCAACTTCATCTTCCATTACAAAAGCCAGTATTGCAACTGATGCTTGGAGTTTAAATTTGCTTCCTTCTTTAGTTGAGTGATCAATATCATTGTTTGAGTGATGCGGTGTCTGTTCAGTCAATAGTTAAAGACTGATCTTCTCAAATACTTCCGCGTGATGGCTTGTTTTCCGAAAAGCCAGTATTCCATGGGGACAGATAATCTAATCTATCACTCAATTTTCTTGTACTCATCATATGGCTCTCTCCTTTTCCCTATTGAGAATCAGCTGTTGAAGATATCCTATTTACTCGAACTTGCAGAATAATGTCAACAACACAACCCTAAGTCAGGGGGCAGTAACATGCGAGAGCATCAATATGCCTAATGACAAGCTGAAAGGTGGTTCTAAAAGTTTTCAGGCGATCAAACAGCCTATTATTATAAAAGGAGATAGTATATTATCAACATCAACAACCAAGGCCGACCTGGAGCTTCTTGCACAGAACAGAGGCAATGCAATGCAGCGTTACAAGGAGAAACGAAAAACTCGAAGGTGCATATTTCATTCTCTCCTTTATAGCTAACTCACTATAGATTGTTTTCTTCTCCAAAGCTTACTGTAACCTGGAACAGGTATGATAAATACATTCGCTATGAGTCGAGGAAGGCAAGAGCGGATACAAGGAAACGGGTGAAGGGTCGATTTGTGAAGGCTAATGAGGCCCCTGTTTTTGGATGATCAGCTTCCTCCGTGGGTTGAAAGTAGCTTTGTTTTGTTTTTGCTTTTTTGGCGTTTTAGTTATGTGTGTGTATATTTTGGTATTCCTTCCACTTATATTTGTTCTAATGTTTTAACAGGTGCAAATGCACATGATGATTTAATTATCCTTTCAATTTTAGAGTTAGGTAGAGATTAATGTTATGCATTATATAAATGATGTCAATAACAATTTCATGCGTAATCTTCTAATAATCAAGTCAAGAAAGTAATTGCAATTAATTATAAATATGTAACTTCTATGTCAAGAATCTCTAACATATAGCTTAGATTATTAATTTAGTTTTGAAACTA

Coding sequence (CDS)

ATGGTCTGTTCCAAGTCCACAACAGGGGAGACCGTCCCCTGTGATTTCTGTAACGACCAAGTTGCGATTCTCTACTGTAGAGCCGACTCTGCTAAGCTTTGTTTGTTCTGCGACAAGCATGTTCACTCTGCCAATTTACTCTCTCGGAAGCATGTTCGTTCTCAGATCTGTGATAACTGTAGGTCTGAGCCGGTTTCAATTCGCTGTTCAACGGATAATCTCGTCCTCTGTCAGGAGTGTGATTGGGATGCTCATGGAAGCTGTTCGGTCTCTGCTGCCCACGATCGAACTCCGATTGAAGGTTTCACTGGCTGCCCTTCTGCACTTGAGCTTGTTTCTTTATGGGGTTTCGATCTTGGAGATAAGAAGCTGGAGGAATCTGAGATGTTGGTGCAGAATTGGGTCTGTTCACAGGATTTGGTTATGCCGATTGATTCTTGGGCTTCTAGAGCTAGTGCGACCGCCTTTAACGACCTCATTGTTCCGAATGATAACCCCTTTCTCTTTGCGAATCTGAACTGTACGGATGCTGCTTCGATGTTCAAGAAGCAGAGTCCGAGCTGTGGAAAGCATAAGCAAGTGATTTACAAGCAGTTGGTTGAGCTGCTTAAGAGGGATTTCGAAGGTGGAGACGATGTTGAGGGCGATGACACTCGAGATGGTGATGCAGGTGGGGAAGATGTTGGATTACAGAGTATGGTTCCTGAAACAACGAATGGGGATTGTTATTGGCAAGGGGATTTGGAAGGTCGTCAAATTTCAAAAGAAGATGATGGGGTTTTTGTTGGTGCTGCTCCTCCTCCATTACTGCAACAACAAGCTTCATTCACGTCTCTGCTTACGATGCCGTCCCATGTGGGTTTGAAAGATAACGAGCGCTCTGTTGATGAAACTGGTGTATGGGACAGTAGCCCAAATCGTCAAAGCACTCAAATTTGGGATTTCCATTTAGGACGGTTAAGGGGACACAAAGATTCAAATACGTTTGACGACGCTTATGGCACAGGCGACATGGGATTTACCATTAAAAATTTTGGTGAGTTTTTGAAAGAAACATCCCCCACAAGCGCGAAGTTGCTAGGAGAAACCTATCAGATCAATTGCTCTAGCGTTCATGATGATATACCATCATTCAATAATAATGTCAACAACACAACCCTAAGTCAGGGGGCAGTAACATGCGAGAGCATCAATATGCCTAATGACAAGCTGAAAGGTGGTTCTAAAAGTTTTCAGGCGATCAAACAGCCTATTATTATAAAAGGAGATAGTATATTATCAACATCAACAACCAAGGCCGACCTGGAGCTTCTTGCACAGAACAGAGGCAATGCAATGCAGCGTTACAAGGAGAAACGAAAAACTCGAAGGTATGATAAATACATTCGCTATGAGTCGAGGAAGGCAAGAGCGGATACAAGGAAACGGGTGAAGGGTCGATTTGTGAAGGCTAATGAGGCCCCTGTTTTTGGATGA

Protein sequence

MVCSKSTTGETVPCDFCNDQVAILYCRADSAKLCLFCDKHVHSANLLSRKHVRSQICDNCRSEPVSIRCSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFTGCPSALELVSLWGFDLGDKKLEESEMLVQNWVCSQDLVMPIDSWASRASATAFNDLIVPNDNPFLFANLNCTDAASMFKKQSPSCGKHKQVIYKQLVELLKRDFEGGDDVEGDDTRDGDAGGEDVGLQSMVPETTNGDCYWQGDLEGRQISKEDDGVFVGAAPPPLLQQQASFTSLLTMPSHVGLKDNERSVDETGVWDSSPNRQSTQIWDFHLGRLRGHKDSNTFDDAYGTGDMGFTIKNFGEFLKETSPTSAKLLGETYQINCSSVHDDIPSFNNNVNNTTLSQGAVTCESINMPNDKLKGGSKSFQAIKQPIIIKGDSILSTSTTKADLELLAQNRGNAMQRYKEKRKTRRYDKYIRYESRKARADTRKRVKGRFVKANEAPVFG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9C7E81.6e-2148.03Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE... [more]
O228007.2e-1943.05Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE... [more]
Q9SSE54.0e-0940.65Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1... [more]
O822565.2e-0956.14Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana OX=3702 GN=COL13 PE... [more]
Q9LUA96.8e-0965.31Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE... [more]
Match NameE-valueIdentityDescription
XP_004152125.17.56e-97100.00zinc finger protein CONSTANS-LIKE 14 [Cucumis sativus] >KGN53028.1 hypothetical ... [more]
KAA0044555.14.03e-9195.45zinc finger protein CONSTANS-LIKE 15-like [Cucumis melo var. makuwa][more]
XP_008454034.11.14e-9094.81PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Cucumis melo] >TYK17026.1 ... [more]
XP_038877051.11.12e-8288.24zinc finger protein CONSTANS-LIKE 15-like [Benincasa hispida][more]
KAG6582017.12.40e-7885.62Zinc finger protein CONSTANS-LIKE 14, partial [Cucurbita argyrosperma subsp. sor... [more]
Match NameE-valueIdentityDescription
A0A0A0KU413.66e-97100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011750 PE=3 SV=1[more]
A0A5A7TT601.95e-9195.45Zinc finger protein CONSTANS-LIKE 15-like OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5D3D2L95.52e-9194.81Zinc finger protein CONSTANS-LIKE 15-like OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3BYW65.52e-9194.81zinc finger protein CONSTANS-LIKE 15-like OS=Cucumis melo OX=3656 GN=LOC10349458... [more]
A0A6J1GVD44.62e-7884.97zinc finger protein CONSTANS-LIKE 15-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 105..147
e-value: 2.6E-16
score: 59.4
IPR010402CCT domainPROSITEPS51017CCTcoord: 105..147
score: 15.030873
NoneNo IPR availablePANTHERPTHR31717ZINC FINGER PROTEIN CONSTANS-LIKE 10coord: 2..151
NoneNo IPR availablePANTHERPTHR31717:SF45ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATEDcoord: 2..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16791.T1Cucsat.G16791.T1mRNA
Cucsat.G16791.T4Cucsat.G16791.T4mRNA
Cucsat.G16791.T3Cucsat.G16791.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding