Cucsat.G16780 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAACCTCCTCTCTCCAACTCTGTTGCGGACACGTTTTAAAGACAGAGAGAAAAGAGAGAAGCGAGAATTCAAAAGCCAAGGAAAATGGGAAGTGATTTCTTTACCGAATCTCAAACGTGGGTTTCTTCTGTTAACGGAATTCGAGAAGACCCAGATGATGAAACTTCCATTGACGGAGGTGAGGGAATTGGGACGGATTCGGATTTCGATGAGTCGGCTCAAATGGGGGTGAAGAAGAGGATGATGAAGAAGAGGAGTCAGGTTTTGCTTGAAGGGTTTGTTGAGGATGAGGATGATTTGATGAGGACTAAGAGCTTGACGGATGAGGATCTTGATGAGCTTAAAGGCTGTGTAGATCTAGGCTTTGGTTTTAGCTATGATGAGATTCCGGAGCTCTGTAACACTCTCCCGGCTTTGGAGCTCTGTTATTCCATGAGCCAGAAGTACATGGACGATCACCAGAAGTCGCCGGAGAGTTCGCCGGCTTCGGCGGTTCCGGCCGACTCTTGCTCTTCTGTTTTCCAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGAGTGCCCGTTTTTCTCTGGGATCTTGATTTTGGAACTGGATTTGTTTGCACATCGTACATTTTTGTTTTATCTTGATTGTGTAGATCGTTTTTTTTGCCCTCTTTTCTTCTTAAGGAGTTTGAATTGAGAATGAGCTGATCTTGTTTCTTAGTTGACTGAACTTTTTGTCTCTCAACTTGTATGGATAATTGCTTGAAATCAACTGGGCGGTCTCTATATTTATCTTTAAGTTTGTGTTGATTATGGAAACTTAGGGACTAAAACAGATTTTCCTTTTAGAAAAGAAAGTTTCAAGGTTAAAACAGAGTAGTAATTTTGAAATTTCAGAGATCTAAGACTTAAACTTTCATTTTTCCCCTACTTCTCTTTGAGAAAATGAGTCTGTTTTTTTTTTCCTCAATGAGAATGTGGTTTTTTCTACTTCTAGCTGGTTGGATGTTTGTTCTGTACTGGTGGGGTGAAGTCAAAAGTCCTGAATTTGTCTTCACTCTATCTTGTGCTTATCACTATGAATTCTTGCGGTCCCAATTTTTACAAGCTGGTTATCTACCCTGTTTTACGTGTAATCTTATCTTGAATATATATAGAAAATAAATTGTTTTCCTTAAAAAAAAGCATTGAAAATAAATATTGATTCAACATGATTTATGACAGGGGATTTTACAATCTAGTCTTTTTTCTGTCATTTTTTGAACTACCTTGATAATTTTAGGACTCCACGGGTGTTAAGAAAAATATTGACAAAAAAAGATTTAAGTGTACTTGGGGTAAGATAAGACATTCTTCTGAACTTTTGAAGCTGTTTTGCTGATACAGGTGATCATCCAGAAGATGTTAAAGCGAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGACTATGCAACTAAGAAGACCATGGAATGGAAGTTTTGATTTGGGATGAGAAAATGAATGCATCTTTTTGCACTAGTAACCTAGCCTTATGGTTTGACGACGTTGCAAAGGTTCCAAGAAAAGATAGATTGAATGATTGAATGAACAAACGGGTCGTTTGATGAGTCTGACTTATGAAGAAGAAGAAGAAGAAGAATGTGTCAGGTTTGAGATTAACCATACACCAAATGAGTCTGACTGAGATAGATTTTGTAAAATATGTAGTTCTTTTTTGTAAATTTGAGAATAAATTGATCATAATAATGTTATGAGTTCATCAATTCTATATCTCCATTTTGTTTTGGTTTAAATTTAAACATTAGTTGGTGGTTTTTATGCAGTGGTTTTGACTTTGAGAGCTTAGCTTCCATAACCCACACCCAACACCCAAGTCTCTTTCACTGACCTTTTTGCATATGGCTGAGGTAACTAACTGTGCTAACCCCCAAAGTGGTTCTTCTCTTCTCTGTTTTCACCCCATTCTGTAGGTAACTGACCCTGACTTTACTAACTATCAGGTTTTTCCAAAGGAAAGCACAGGGCAGAAAGTTCATTCTTTGTTGTTTCAATGTCTAAGTAGAGAAATTTTTTGGTTTCTTATTTTGGGTTGTTGGTGGGTAATGTCCTCTAGTTTCTGCCATTCAACAACTTGAAATTAGAGGCCGGGGAACTTAACAGTCTTGATTTCGTCTCTACTTCTGATTTTCTAATCTACCTGAGGGCCTTGATGCCAAAGGAAAAGGAAATCTTTGGTTTATGTTGTATTTGTAGAAAGGTTGTTGCCTTATGATGTCCTTGTAGTTTAGTTCTTGAGTTCAGGCCATGGTTTTGCCAAAGAGAAGAGAAGATTGGGAGAATTTAACTTTACTTTTTTGTTTGTCTCAAAAGCGTTTGACAACCAACATGTAATTGAGATGGATGATTAAATTAATAAAACGATTGAAAGATCTATCACATCCTTATTGGTATTTCT ATGGGAAGTGATTTCTTTACCGAATCTCAAACGTGGGTTTCTTCTGTTAACGGAATTCGAGAAGACCCAGATGATGAAACTTCCATTGACGGAGGTGAGGGAATTGGGACGGATTCGGATTTCGATGAGTCGGCTCAAATGGGGGTGAAGAAGAGGATGATGAAGAAGAGGAGTCAGGTTTTGCTTGAAGGGTTTGTTGAGGATGAGGATGATTTGATGAGGACTAAGAGCTTGACGGATGAGGATCTTGATGAGCTTAAAGGCTGTGTAGATCTAGGCTTTGGTTTTAGCTATGATGAGATTCCGGAGCTCTGTAACACTCTCCCGGCTTTGGAGCTCTGTTATTCCATGAGCCAGAAGTACATGGACGATCACCAGAAGTCGCCGGAGAGTTCGCCGGCTTCGGCGGTTCCGGCCGACTCTTGCTCTTCTGTTTTCCAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGA MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMDDHQKSPESSPASAVPADSCSSVFQSDCELEDLQSW Homology
BLAST of Cucsat.G16780 vs. NCBI nr
Match: XP_004152108.1 (uncharacterized protein LOC101213317 [Cucumis sativus] >KGN53057.1 hypothetical protein Csa_014697 [Cucumis sativus]) HSP 1 Score: 288 bits (736), Expect = 4.22e-97 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Cucsat.G16780 vs. NCBI nr
Match: XP_008453998.1 (PREDICTED: uncharacterized protein LOC103494552 [Cucumis melo] >KAA0044579.1 uncharacterized protein E6C27_scaffold46G003290 [Cucumis melo var. makuwa]) HSP 1 Score: 268 bits (685), Expect = 2.58e-89 Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cucsat.G16780 vs. NCBI nr
Match: TYK17004.1 (uncharacterized protein E5676_scaffold130G001470 [Cucumis melo var. makuwa]) HSP 1 Score: 268 bits (685), Expect = 1.03e-88 Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cucsat.G16780 vs. NCBI nr
Match: XP_022955549.1 (uncharacterized protein LOC111457532 [Cucurbita moschata] >KAG7018466.1 hypothetical protein SDJN02_20334, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248 bits (633), Expect = 2.15e-81 Identity = 127/146 (86.99%), Postives = 135/146 (92.47%), Query Frame = 0
BLAST of Cucsat.G16780 vs. NCBI nr
Match: KAG7018467.1 (hypothetical protein SDJN02_20335, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 247 bits (630), Expect = 6.15e-81 Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 0
BLAST of Cucsat.G16780 vs. ExPASy TrEMBL
Match: A0A0A0KXD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012530 PE=4 SV=1) HSP 1 Score: 288 bits (736), Expect = 2.04e-97 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Cucsat.G16780 vs. ExPASy TrEMBL
Match: A0A5A7TTN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003290 PE=4 SV=1) HSP 1 Score: 268 bits (685), Expect = 1.25e-89 Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cucsat.G16780 vs. ExPASy TrEMBL
Match: A0A1S3BXQ6 (uncharacterized protein LOC103494552 OS=Cucumis melo OX=3656 GN=LOC103494552 PE=4 SV=1) HSP 1 Score: 268 bits (685), Expect = 1.25e-89 Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cucsat.G16780 vs. ExPASy TrEMBL
Match: A0A5D3D198 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001470 PE=4 SV=1) HSP 1 Score: 268 bits (685), Expect = 5.01e-89 Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cucsat.G16780 vs. ExPASy TrEMBL
Match: A0A6J1GWL1 (uncharacterized protein LOC111457532 OS=Cucurbita moschata OX=3662 GN=LOC111457532 PE=4 SV=1) HSP 1 Score: 248 bits (633), Expect = 1.04e-81 Identity = 127/146 (86.99%), Postives = 135/146 (92.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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