Cucsat.G16776 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16776
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionNAD(P)-linked oxidoreductase superfamily protein
Locationctg24: 980332 .. 982436 (-)
RNA-Seq ExpressionCucsat.G16776
SyntenyCucsat.G16776
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATCGCGCTGTTGCTGCCGGGGTTACATTCTTGGATACCTCAGACATTTACGGGCCGTTCACCAACGAGGTTCTTCTTGGACAAGCTCTCAAGGGAGATGGGGTTAGAAAGAAAGTTCAGTTGGCTACTAAATTTGGACTCCATCTTGTCGACGGCGATTTCGAGGTTCATGGCGATCCAACCTACGTGAGGGCTGCATGTGAGGCTAGCTTGGAGCGGCTCGGGGTTGATTGTATTGATCTCTATTATCAACATCGGATCGACACGAAAGTTCCTATTGAAGTCACGGTTAGTTAATATTATATTATATCTCGAGTTTGGTTTGAAGTTAGTTGTAAAAAATGTTTTACAATTCCATTGTGAGGTTTTTGAGTTTTGTTTGGATATGACTGTAGATTGGAGAGCTAAAGAAGCTAGTTGAAGAAGGGAAAATAAAATACATAGGTTTATCAGAAGCTTCAGCCTCTACCATTAGAAGAGCTCATGCAGTTCATCCCATTTCAGCTGTTCAAATCGAGTGGTCTTTGTGGGCTCGAGATGTTGAACAAGATATTATTCCTACTTGCAGGTATTAATTTCTTTTCTTTTTCTTAAGAGAAAACTCTTTCTCAATCACATCCATCTAGCAAGCTTAAATTAATCTCAAAACACATTATTAATTAATGCTATTTTCTTTTACTAAGAATGATTATAAAAAACGCACTACAATTATATATTGAACAACTTGTTGTTTGATTCCTATTAGTTGTTGGATTTCAAGTGTGAGGTTTCTCTAACTTTTTGGTCAATAAATGGAGTCAGGTAGTTATTATGGAGTAGATGTATGAGCATATATAATTCAATTAGTTAATATACATATTATTTTCTTTTAAAGTTAGAGTAAAGATTTAAAATTGAATGCACAATTTGAGTTTAAAATACAAAGTATTGCTATTTTTTAAGATTAAACTACAAGTTTAATAAACTATTATTAACATATTTTAAAAGATTCATACTCTGATCAATACTTTATGTATTCAACTAAAATTTCAAAATGTGATATATATTTAATATGTATATTATATGGTGATTTGAATTTGAATTTTCTAACAAAATTTCAGCGATTTATTATTTTCCTTTTGTCTTTTTTAGGGAATTGGGCATTGGAATTGTGGCATACAGTCCTCTGGGAAGGGGTTTTCTATCCTCAGGGGCCACCTTCATTCAAAACTTAACAGAAGATGACTACAGAAAGGTATATAATTGATCCTTCAAAACTTGTGTGAATGTTAAAATTAGACATCTAATTGTAAAAGTAGGGTGTAACAATTGTGTACTTTGAAATTAAGTTCAATTTTTACCATTTATACGAGTCGAATTTTAACAACTATATTAAAAGTTTGAGTATTCATTTTTAACGCGGGTAGAAGTTGAAGTGTCAATTCTTACCATAGAAGGTTTGAGAGTATAATTGTAATTATTACCGTATCTCAAAAGTGATTTTTTGTAGCTCTTGGTTTGAAGGTGTTGTATTTATATGGTATTAGAGGCAATAAAATCTCAAAATGAAAATAAGGTGTTATTTTTCGAGAAAAAGCTATGAATTCTTATACACTTATTATCACCATTGCTGTTATAGTTTAGGTAAACACGATTTAGGTCTTTTTCAACGATTTTCTACGTTAGGAAAATAATTTATTTCTTGTTGTGTGAAAATCAACCTAAATATTTTCGATTGCAATTCATTACAATTGATTTATAAATGAAATTTCATTATGATTACATCAATTTACATTTGTTATCGTAGTCCATTTGACGATTTGGTAAACATAGCCTTAATCATTTGCGTTTTTTAATCCTTTTGACAGAAACTCCCTCGATTTCAACCTGAAAACTTGGAGCACAACAAGAGTATATTCGAGAAGGTTAGTGAATTAGCGGCTAGAAAAGGGTGCACCACATCTCAACTAGCATTAGCATGGGTTCACAACCAAGGGAGTGATGTGGTTCCAATACCTGGAACCACTAAGCTTCAAAATCTGCAATCAAACATTGAAGCTTTGTCGGTGAAACTTACACCACAAGAAATGGCTGAACTTGAAGCTTATGCATTATCCGATGGAG

Coding sequence (CDS)

CATCGCGCTGTTGCTGCCGGGGTTACATTCTTGGATACCTCAGACATTTACGGGCCGTTCACCAACGAGGTTCTTCTTGGACAAGCTCTCAAGGGAGATGGGGTTAGAAAGAAAGTTCAGTTGGCTACTAAATTTGGACTCCATCTTGTCGACGGCGATTTCGAGGTTCATGGCGATCCAACCTACGTGAGGGCTGCATGTGAGGCTAGCTTGGAGCGGCTCGGGGTTGATTGTATTGATCTCTATTATCAACATCGGATCGACACGAAAGTTCCTATTGAAGTCACGATTGGAGAGCTAAAGAAGCTAGTTGAAGAAGGGAAAATAAAATACATAGGTTTATCAGAAGCTTCAGCCTCTACCATTAGAAGAGCTCATGCAGTTCATCCCATTTCAGCTGTTCAAATCGAGTGGTCTTTGTGGGCTCGAGATGTTGAACAAGATATTATTCCTACTTGCAGGGAATTGGGCATTGGAATTGTGGCATACAGTCCTCTGGGAAGGGGTTTTCTATCCTCAGGGGCCACCTTCATTCAAAACTTAACAGAAGATGACTACAGAAAGAAACTCCCTCGATTTCAACCTGAAAACTTGGAGCACAACAAGAGTATATTCGAGAAGGTTAGTGAATTAGCGGCTAGAAAAGGGTGCACCACATCTCAACTAGCATTAGCATGGGTTCACAACCAAGGGAGTGATGTGGTTCCAATACCTGGAACCACTAAGCTTCAAAATCTGCAATCAAACATTGAAGCTTTGTCGGTGAAACTTACACCACAAGAAATGGCTGAACTTGAAGCTTATGCATTATCCGATGGA

Protein sequence

HRAVAAGVTFLDTSDIYGPFTNEVLLGQALKGDGVRKKVQLATKFGLHLVDGDFEVHGDPTYVRAACEASLERLGVDCIDLYYQHRIDTKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPISAVQIEWSLWARDVEQDIIPTCRELGIGIVAYSPLGRGFLSSGATFIQNLTEDDYRKKLPRFQPENLEHNKSIFEKVSELAARKGCTTSQLALAWVHNQGSDVVPIPGTTKLQNLQSNIEALSVKLTPQEMAELEAYALSDG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7XT994.0e-12177.94Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g... [more]
A2XRZ01.2e-12077.94Probable aldo-keto reductase 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_153... [more]
Q93ZN27.1e-11875.46Probable aldo-keto reductase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g60710 PE=2... [more]
B8ASB21.6e-11774.91Probable aldo-keto reductase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_153... [more]
Q0JE321.6e-11774.91Probable aldo-keto reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g... [more]
Match NameE-valueIdentityDescription
XP_011653050.13.55e-195100.00probable aldo-keto reductase 2 [Cucumis sativus] >KGN53069.1 hypothetical protei... [more]
KAA0044587.18.90e-18996.34putative aldo-keto reductase 2 [Cucumis melo var. makuwa] >TYK16997.1 putative a... [more]
XP_038877959.11.01e-17891.18probable aldo-keto reductase 2 [Benincasa hispida][more]
XP_022145246.16.92e-17288.24probable aldo-keto reductase 2 [Momordica charantia][more]
KAG7018472.18.85e-17287.91putative aldo-keto reductase 2, partial [Cucurbita argyrosperma subsp. argyrospe... [more]
Match NameE-valueIdentityDescription
A0A0A0KW371.72e-195100.00Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G01510... [more]
A0A5D3CZ404.31e-18996.34Putative aldo-keto reductase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1CVT03.35e-17288.24probable aldo-keto reductase 2 OS=Momordica charantia OX=3673 GN=LOC111014744 PE... [more]
A0A6J1IR471.45e-17187.18probable aldo-keto reductase 2 OS=Cucurbita maxima OX=3661 GN=LOC111479238 PE=4 ... [more]
A0A6J1GU972.93e-17187.18probable aldo-keto reductase 2 OS=Cucurbita moschata OX=3662 GN=LOC111457531 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036812NADP-dependent oxidoreductase domain superfamilyGENE3D3.20.20.100coord: 1..272
e-value: 6.3E-96
score: 323.2
IPR036812NADP-dependent oxidoreductase domain superfamilySUPERFAMILY51430NAD(P)-linked oxidoreductasecoord: 1..268
IPR023210NADP-dependent oxidoreductase domainPFAMPF00248Aldo_ket_redcoord: 1..267
e-value: 7.1E-70
score: 235.5
NoneNo IPR availablePANTHERPTHR43625AFLATOXIN B1 ALDEHYDE REDUCTASEcoord: 2..272
NoneNo IPR availablePANTHERPTHR43625:SF46ALDO-KETO REDUCTASE 3-RELATEDcoord: 2..272
NoneNo IPR availableCDDcd19145AKR_AKR13D1coord: 1..265
e-value: 0.0
score: 526.615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16776.T1Cucsat.G16776.T1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004033 aldo-keto reductase (NADP) activity
molecular_function GO:0047834 D-threo-aldose 1-dehydrogenase activity