Cucsat.G16770 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATCTTTTTCCTCATCTTCATGATCATACATAGTTCTTTGGGAAATTAAAAATCATATCAGCAAAAAAGAGAGTTAGTTTTATGGCTGAGTTCCTATGGACTTTTGCTGTTCAAGAAGTGTTGAAGAAGGTATTGAAACTTGCAGCTGACCAAATTGGTTTGGCATGGGGCTTGGACAAGGAGCTTTCAAACCTCTCCCAATGGCTACTCAAAGCAGAAGCTATTTTAGGTGAGATTAACAGGAAAAAACTACACCCTAGTTCTGTGAGACTGTGGGTGGAAGATCTTCAACTTGTTGTTCATGAAGCAGACGATCTATTGGATGAGCTTGTTTATGAAGATCTTCGTACGAAGGTGGAAAAAGGACCGATTAACAAGGTACGTTCTTCTATATCAAGTCTCTCGAATATTTTCATTATCTTTCGCTTCAAAATGGCCAAGAAAATCAAGGCTATTATTCAAAAGTTGCGTAAATGTTACTCTGAGGCCACTCCTTTAGGACTTGTTGGTGAAGAATTCATACAAACAGAGAATGATCTTAGTCAGATTCGAGAGACGATCTCAAAACTTGACGATTTTGAAGTTGTTGGAAGGGAGTTTGAAGTTTCAAGCATAGTGAAACAAGTGGTTGATGCTAGTATTGACAATGTTACATCTATCTTGCCCATTGTGGGTATGGGTGGAATCGGAAAAACAACTTTGGCAAAGACAATCTTCAATCATGAGGAGATCAAAGGACATTTTGATGAAACAATTTGGATATGTGTGTCCGAACCATTTCTTATCAACAAAATTTTGGGAGCAATTTTACAAATGATAAAGGGTGTTTCCAGTGGCTTGGATAATAGAGAGGCTTTACTTCGAGAGCTTCAAAAGGTGATGCGAGGTAAAAGATATTTTCTTGTGCTTGATGATGTTTGGAATGAAAATCTTGCTTTATGGACTGAATTGAAAAATTGTTTACTGAGTTTCACTGAAAAATCTGGAAACGCTATTATTGTGACTACAAGAAGTTTCGAAGTAGGAAAGATTATGGAGAGTACTCTTTCTAGCCATCATTTGGGAAAATTATCTGATGAACAATGTTGGTCTTTGTTTAAAAAAAGTGCAAATGCAGATGAACTGCCAAAGAATCTAGAGTTGAAGGATCTTCAAGAAGAATTGGTGACAAGGTTTGGTGGTGCACCATTGGTTGCAAGAGTTTTGGGAGGGGCACTGAAATTTGAAGGGGTCTACGAGAAATGGGTGATGTCTCTTAGAACCACAACAAGTATACCGTTACAAGATGAAGATTTAGTTTTATCTACATTAAAATTAAGTGTAGATCGTCTACCATCCTTCTTGTTGAAGCAATGCTTTGCATATTGTTCAAATTTTCCTAAAGGTTTTAAATTTAAAAAAGAAGAGCTAATTGAAATGTGGATGGCACAAGGGTTCATTCAACTACATGAAGGAAGAAACGAGATAACGATGGAGGAAAATGGAGAAAAGTACTTCAACATCTTGTTGTCTCGCTCTCTATTTCAAGATATCATTAAGGATGATAGAGGAAGAATTACTCATTGTAAGATGCATGATCTTATCTATGAAATTGCGTGTACAATTTCAAATTCTCAAAAGTTGCAACAGGAACATATTGATTTGTTGGATAAAGGAAGTCACACCAATCATAGGATAAACAACGCCCAAAATTTACGCACACTCATTTGCAATAGACAGGTGCTTCACAAGACTATTTTTGACAAGATTGCAAATTGTACATGCCTGCGAGTTTTAGTAGTGGATTCATCTATTACAAAACTATCCGAGTCGATTGGTAAGATGAAACATTTGAGATATCTCGACATTTCAAATTCAAAGATAGAGGAACTTCCAAATTCTATCTCTTTGCTTTATAACTTACAAACACTGAAGCTTGGAAGCTCAATGAAAGACCTTCCACAGAATTTGAGCAAGTTGGTTAGTTTAAGACATCTAAAGTTCTCAATGCCACAAACGCCTCCACATTTGGGTCGATTGACTCAACTTCAAACATTGTCTGGTTTTGCAGTTGGATTCGAGAAGGGTTTCAAAATAGGAGAACTTGGATTTTTGAAAAACCTCAAAGGTAGATTAGAACTTTCAAATCTTGATCGAATTAAACATAAAGAGGAAGCCATGAGTTCCAAATTGGTAGAAAAGAACTTGTGTGAGCTATTCTTGGAATGGGATATGCATATTTTAAGAGAAGGTAACAACTACAATGACTTTGAAGTGTTAGAAGGGCTTCAACCACACAAAAATCTTCAATTCCTGAGTATCATAAACTTTGCTGGCCAACTTCTGCCTCCTGCCATTTTTGTTGAAAATTTAGCTGTGATACATCTAAGACATTGTGTAAGATGTGAAATACTTCCAATGCTTGGACAATTACCTAATTTAGAGGAACTAAATATTTCCTACTTACTTTGTCTAAGAAGTATTGGGTATGAATTCTATGGAAATTATTATCATCCCTACAGCCATAAGGTTTTATTTCCCAAGTTGAAGAAATTTGTACTCTCTCAAATGCCCAATCTAGAGCAATGGGAAGAAGTAGTATTCATATCAAAGAAAGATGCAATTTTTCCTCTTCTTGAGGACTTAAATATTAGTTTTTGTCCTATATTAACAAGTATTCCAAATATTTTTAGACGTCCTCTTAAAAAGCTACATATTTATGGATGTCATGAAGTGACAGGATTGCCAAAAGATCTACAACTTTGCACTTCCATTGAGGATCTAAAGATTGTTGGGTGCCGTAAAATGACACTAAATGTGCAAAATATGGATAGCTTGTCTCGTTTCTCTATGAATGGGTTGCAGAAGTTTCCCCAAGGGCTGGCTAATCTAAAAAACTTGAAAGAAATGACAATCATTGAATGCTCACAAGATTGTGACTTTAGTCCTCTTATGCAACTTTCTTCACTTGTAAAGCTTCATTTGGTTATTTTCCCAGGGAGCGTGACTGAGCAACTTCCTCAACAACTTGAGCATCTCATTGCCTTAAGATCTTTGTACATTAATGATTTTGATGGAATTGAGGTTTTACCAGAATGGTTGGGAAACCTTACCTCTTTGGAAGTTTTGGGACTTTATTATTGTATAAATTTGAAACAGTTTCCTTCAAAGAAAGCCATGCAATGTCTCACCCAATTAGTCCACGTGGATGTCCACAACTGCCCGAGTTCGCAGATTTTGTCCCATGATCTAAAGGCCAAAGCTCATGCCAAAGCAAACTTAGTTCAATGGTAATTAATATTGTATTTCATATCATATTCATGAGATATTGTAGCTACCTTAACTCTCCAATATTATTTTCACTTGTTTTTCTTGTATTGAACAATGCATGTTCTTTCTTTTTTGTTAGTAGAGTGTGAGAAGACTAACTTCTTCTTCTTTTTTTTGTGTACGTATGTGATTAGTTTCTATATAGCAAAACTCT ATGGCTGAGTTCCTATGGACTTTTGCTGTTCAAGAAGTGTTGAAGAAGGTATTGAAACTTGCAGCTGACCAAATTGGTTTGGCATGGGGCTTGGACAAGGAGCTTTCAAACCTCTCCCAATGGCTACTCAAAGCAGAAGCTATTTTAGGTGAGATTAACAGGAAAAAACTACACCCTAGTTCTGTGAGACTGTGGGTGGAAGATCTTCAACTTGTTGTTCATGAAGCAGACGATCTATTGGATGAGCTTGTTTATGAAGATCTTCGTACGAAGGTGGAAAAAGGACCGATTAACAAGGGAGCGTGA MAEFLWTFAVQEVLKKVLKLAADQIGLAWGLDKELSNLSQWLLKAEAILGEINRKKLHPSSVRLWVEDLQLVVHEADDLLDELVYEDLRTKVEKGPINKGA Homology
BLAST of Cucsat.G16770 vs. ExPASy Swiss-Prot
Match: Q9FI14 (Disease resistance protein TAO1 OS=Arabidopsis thaliana OX=3702 GN=TAO1 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.1e-07 Identity = 40/140 (28.57%), Postives = 73/140 (52.14%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy Swiss-Prot
Match: Q9FKZ1 (Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana OX=3702 GN=At5g66900 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 42/141 (29.79%), Postives = 70/141 (49.65%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy Swiss-Prot
Match: B4N9T4 (Leucine-rich repeat protein soc-2 homolog OS=Drosophila willistoni OX=7260 GN=Sur-8 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05 Identity = 40/142 (28.17%), Postives = 75/142 (52.82%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy Swiss-Prot
Match: Q9FKZ0 (Probable disease resistance protein At5g66910 OS=Arabidopsis thaliana OX=3702 GN=At5g66910 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05 Identity = 24/71 (33.80%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy Swiss-Prot
Match: B3LWU3 (Leucine-rich repeat protein soc-2 homolog OS=Drosophila ananassae OX=7217 GN=Sur-8 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05 Identity = 39/142 (27.46%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of Cucsat.G16770 vs. NCBI nr
Match: XP_031740228.1 (putative disease resistance protein RGA3 isoform X2 [Cucumis sativus]) HSP 1 Score: 328 bits (840), Expect = 2.11e-104 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cucsat.G16770 vs. NCBI nr
Match: XP_004152283.3 (putative disease resistance protein RGA3 isoform X1 [Cucumis sativus] >KGN53113.2 hypothetical protein Csa_014548 [Cucumis sativus]) HSP 1 Score: 328 bits (840), Expect = 7.16e-103 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cucsat.G16770 vs. NCBI nr
Match: XP_008453957.1 (PREDICTED: putative disease resistance protein RGA3 isoform X2 [Cucumis melo]) HSP 1 Score: 248 bits (634), Expect = 2.91e-74 Identity = 124/138 (89.86%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of Cucsat.G16770 vs. NCBI nr
Match: XP_008453956.1 (PREDICTED: putative disease resistance protein RGA3 isoform X1 [Cucumis melo] >KAA0044619.1 putative disease resistance protein RGA3 isoform X1 [Cucumis melo var. makuwa] >TYK16970.1 putative disease resistance protein RGA3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 248 bits (634), Expect = 1.87e-73 Identity = 124/138 (89.86%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of Cucsat.G16770 vs. NCBI nr
Match: XP_038881404.1 (putative disease resistance protein RGA3 [Benincasa hispida]) HSP 1 Score: 144 bits (362), Expect = 2.77e-36 Identity = 81/146 (55.48%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy TrEMBL
Match: A0A0A0KXG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=4 SV=1) HSP 1 Score: 328 bits (840), Expect = 4.97e-104 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy TrEMBL
Match: A0A1S3BYQ0 (putative disease resistance protein RGA3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494523 PE=4 SV=1) HSP 1 Score: 248 bits (634), Expect = 1.41e-74 Identity = 124/138 (89.86%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy TrEMBL
Match: A0A5D3D021 (Putative disease resistance protein RGA3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001110 PE=4 SV=1) HSP 1 Score: 248 bits (634), Expect = 9.07e-74 Identity = 124/138 (89.86%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy TrEMBL
Match: A0A1S3BYA2 (putative disease resistance protein RGA3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494523 PE=4 SV=1) HSP 1 Score: 248 bits (634), Expect = 9.07e-74 Identity = 124/138 (89.86%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of Cucsat.G16770 vs. ExPASy TrEMBL
Match: A0A0A0KU03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016440 PE=4 SV=1) HSP 1 Score: 183 bits (464), Expect = 1.41e-56 Identity = 90/110 (81.82%), Postives = 98/110 (89.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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