Cucsat.G16583 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16583
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTransmembrane protein
Locationctg24: 1102677 .. 1105516 (+)
RNA-Seq ExpressionCucsat.G16583
SyntenyCucsat.G16583
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCACCCCAACGTTTAATCCATTAATATAGCTAATTTGTAACTAAAAAATAAAATTAAATTTTAACAAAATCGAGATTTCGAACATCTATGATAATCTTAGATTATAATAAAATTGATATTGATATTTTGTGAAATGGAGAAATTGGTTCAATAATTGTTTGGAAGAAAAAGAAAGGGTAGCAATGGGAGCATACCATTAAAAAGAGAACACGTGTCAAATAGCAATTGGAAGGTATTCCACGTGAAAGTGAAATGATATATTCTGTTGGAAAGTGAAGAAAGAAAGAAAAGGAAGAGAAAGAAAAGAAAATGGCGGAGGCGGCGGCGGTGGAGATGGAACTCATCAGCCTTGCGATTCGGAGGCTGATGGAGGAGAATCGCCACAGAACCAACTCTCATCGGAGCTCCGATGCCGATGCCGATGCCGACGCCGACGATATGCAACTTCTTTCCCGATTACTCTCTGAGGTTCGTTAGATTTCGTTAATTCATTCATTCATATATATATGATCAGTCTGCAGATGATTTCATCGATTAATTTTTTAATTTTAAAACATCCTTCCATTTTTTCTTTTTATATTGAGATTCAAATCTCCTGTGATGTTTATTGCTTTCATGATTATTCAACAAAATTGGGAGAGTTGAAATCTGGATATCATTTTTGTTGAGTTTAGGAGAACTTGATAGATAATTCCACTTCTTTTACGTTTTTGGATTTCGAGTTATAACTTGAAAAATAAAAATCTAACTATATAATAAAACTTAATTTTGGTTGGAAGGAGACCGACTATTATATAACTATACTATTGAATAGTATGCAAACTGTTGAATAATATAGTTACCTTAAAGTGTTAATTGGTTTTGTTTATACATATTGTATAAAGACCATAAAGTTGAAAGGGTTTGAGCTTCCTTAATCTTCAAGCCTATACTAAATTCGGGTTTGAGCTTCCTTAGTCTTCAAGCCTATACTAAATTCATGTGTGCATTTATAGGAATTAAATTTTGTTTTCTAAGTTTGTGTGTTTCAAACTGTTCAATTTTTTAAATCAAAATTGCTATATTTAACCGGTCACGTTTAAACTCAATCCAATTTTGTAAAAATAATATATACTATGTAATGGTATAAATTATATAATACTACAAAATAATAACTATATACATATTTTTATGTTAAATTACAAAATCTATTCCTAAGAGATAGAATTTAGTTCCAAAATAGTAACTACTACATAAACACTATATAATATATATATATGTACACATACATACACATGGATTAAATTTTAAATTTAACCAATTAATTTGCAATTTAACTGATTTTTTAAATATAAATTATATTACTAATAGTTTAGACTAGTTTTGATTTTTAAAAATAGTAAAATATTAAAATTATTTATAAAATATAACAAAATTGTTATATTTTAAAGGGAAAAAAAAATGAACACTTTCCTAAAATTTTGGTTATCCTTCTCAATTCTTCCATTTTTAAAATTCCCCTTAACATAGGATACAATATCGAACACATTTAAACAATTTTTTAAAATTAAAATCTAACTTTTGAATAAAATAAAACCTTATTTTCTTTGAATTTAGATTCTCTATCAAATATTTCCCTAAATTACTCTGCCAATTAAAAACCTTTGATAAATATGGTATGTTTTAAATTTGAAATTTGACATCTTAATTTTTTTTGGTTAATTTAAAATTTAAAATCTTTATCAATAATTTCTCACGACCCATTTGGTTATTATTTGGCCTTATGCTTTTGGTTCGTTAGAATTAAATATCTTTTCTTGTTTTCAAAAAATCAAATACTTACGACTAACAAATAGTTAAATTTCTTAATAATTTTCACTTAACTTTTTTTCAAAAGAAATTATGAACCACACTGGAAACCATTTTATTTTTTATTTTTAAAAACTAAACATCTTTCCTTTTCTCATAATTGAAGTTACAACAAAATACAAGTATAGAAATTATTTTTTAAGAACTTTACAAAGCATTAACCTCTTCTCTTTGCTTAAAAGAAAAACTGAGAGAAAATAAACTCAAATAAGAATAGGTTTGATTTACCAATGAGAAACAAGAGTGAAAATCCTGAAATTTATTTTCAAATTAGGAAAGAACAAGTAATTGGCCTTTACTACCATTAACAGGTGGAATCAACAAGAGGAGAACAGAGGCTTAACCACTCGAAGCAAGAGGATGGGGAAATAATTGAAACAAACTTAGAGGCAGAAAGAGAAAATAATGTGGAAAGAAGTGAAATGAAATTGAAAACAGAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAAGCAAAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAAGTGTCTTTCATTTTGAAACTCAGAGATGGGTTGTTGAGCAATCCATTCAAATCCCTAGCAACAATTCTGAAAAGAAAGACAACTTCAGCAATACAACATCAGATTGAAGCTACTGAATTGCCTCATCTTAATATACCTGCCTTACCTCACGTGACCTTACCCGACTTCGATGATTCATAGCTTCATCAAGATATCATCATATAAGTTGTGTTCCTTTGATTTTGTTTTTCTAGCCACAACTAAACATTTGTACAAACTTTGTATCTATATTAGTTGTTCTAAAGGAAGAAATTATATTGAAATCCTGTATTTTGTCGGGCGCAGAGTGCCGGTACTGCCTTTTGTTTTGGAAGTTTAAAGCTGGGATTTATAATAAATAGCAAATAGTACGACTCACATTTTGGATAGAACGCAGGGAGTACTTGAATTTGAAGAAAGTATCTATTTCA

Coding sequence (CDS)

ATGGCGGAGGCGGCGGCGGTGGAGATGGAACTCATCAGCCTTGCGATTCGGAGGCTGATGGAGGAGAATCGCCACAGAACCAACTCTCATCGGAGCTCCGATGCCGATGCCGATGCCGACGCCGACGATATGCAACTTCTTTCCCGATTACTCTCTGAGGTGGAATCAACAAGAGGAGAACAGAGGCTTAACCACTCGAAGCAAGAGGATGGGGAAATAATTGAAACAAACTTAGAGGCAGAAAGAGAAAATAATGTGGAAAGAAGTGAAATGAAATTGAAAACAGAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAAGCAAAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAAGTGTCTTTCATTTTGAAACTCAGAGATGGGTTGTTGAGCAATCCATTCAAATCCCTAGCAACAATTCTGAAAAGAAAGACAACTTCAGCAATACAACATCAGATTGAAGCTACTGAATTGCCTCATCTTAATATACCTGCCTTACCTCACGTGACCTTACCCGACTTCGATGATTCATAG

Protein sequence

MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTLPDFDDS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_004152113.13.05e-120100.00uncharacterized protein LOC101214522 [Cucumis sativus][more]
KAE8649098.12.47e-115100.00hypothetical protein Csa_015237 [Cucumis sativus][more]
XP_008454012.12.41e-10188.42PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo][more]
KAA0044571.11.75e-9990.11uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa][more]
TYK17012.11.22e-9289.47uncharacterized protein E5676_scaffold130G001570 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0KTW61.47e-120100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012410 PE=4 SV=1[more]
A0A1S3BXR61.17e-10188.42uncharacterized protein LOC103494562 OS=Cucumis melo OX=3656 GN=LOC103494562 PE=... [more]
A0A5A7TSP68.45e-10090.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CZN35.89e-9389.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1IS752.43e-6367.20uncharacterized protein LOC111479485 OS=Cucurbita maxima OX=3661 GN=LOC111479485... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availablePANTHERPTHR35280F17L21.9coord: 8..187
NoneNo IPR availablePANTHERPTHR35280:SF1F17L21.9coord: 8..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16583.T1Cucsat.G16583.T1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane