Cucsat.G16572 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16572
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionLeucine-rich receptor-like protein kinase family protein
Locationctg24: 877690 .. 881981 (+)
RNA-Seq ExpressionCucsat.G16572
SyntenyCucsat.G16572
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAATAGAAAATGATATAAGAAGAAGGTGAATTTAAAAATAGAAAGGCACAGAAAGCGAAGTAAGAGAGAAAGCAAGAAAACATAAGAGAAGATGAAGTAAGCGACAATGATCCAAAAATGGCCATTCATAATTTCATATATCATTTCTCTCTTTCTTCTTCATTCTACAATCTTCATTCTTCATTCTTTCTCCTCCAATTTCTGTTTCCTCTCTCCTTTTCCATGTAACTTTCCATCTCCTTCAACTGAAAAAACACCCATTAACTGAACTTCATTCTTCTCCAATGTCTTTCCTCTGTTTCTTCGCTCTTTCCCTTTTGGGATCCATCTCCACTCTTCTTCAAAATGCCATTGCCTTCAATGAACTTTATCCTCAACTCAACGACGATATCCTCGGCTTAATCGTTTTCAAATCCGACCTTCAAGACCCTTCTTCCGTTCTTTCCTCCTGGAGTGAAGACGATGACTCCCCTTGTTCTTGGAAGTTCATTAAATGCAACCCCATTAATGGCAGAGTTTCTGAGGTTTCCATTGATGGGTTGGGATTATCTGGGAGAATCGGAAGAGGGCTTGAGAAATTACAGCATCTCAAGGTATTGTCTCTCTCTGGGAATAATTTCACTGGGAATCTTAGTCCTCAGCTTGTTCTTCCTCCTAGTCTCGACAGAGTTAATTTCAGCGGCAATAGTTTATCTGGGCGGATTCCTGTTTCTCTTATCTCTATGTCTTCCATTAGATTTCTTGATTTTTCTGATAATCTCTTATCTGGGCCACTTCCTGATGAAATGTTTGTTAATTGTTCTTCTCTTCATTATCTTTCTCTTGCTTCTAATATGCTTCAAGGCCCTGTTCCCAACACATTGCCCACAAGGTGTTTATATTTAAACACTCTCAATCTTTCAACCAATCAATTCTCCGGTAGCTTAAATTTTGCTCCTGGGATTTGGTCTTTAGCAAGGCTGAGGACATTAGATCTCTCAAAAAATGATTTCTCTGGTGTTTTACCACAAGGGATTTCAGCTATTCATAATCTAAAAGAGCTCAAGTTGCAGAACAACCAATTCTCAGGGCCATTACCTTCAGACTTGGGATTATGCGTCCACTTAGCTACATTGGATGTCAGTGGAAACCGTCTCACCGGGCCGCTACCGAACTCAATGAGGCTCTTAACCTCCTTAACCTTCCTCAATATAGGATTCAACAGTTTTTCAGATGAGCTCCCACAGTGGATTGGAAACATGGGAAGGTTAGAATACATGGATTTCTCAAGCAATGGCTTCACTGGTAGTCTTCCCTTAACAATGGGGGGATTAAGATCGGTGAAATACATGAGTTTTTCAAACAATAAGCTGACTGGGAACATCCCAGAGACATTGATGGAATGTTCTGAGCTATCTGTGATCAAGCTTGAAGGAAACAGTTTGAATGGAAGGGTGCCAGAAGGGTTGTTTGAACTGGGGTTAGAGGAGATGGATTTGTCTAAGAATGAGCTGATTGGTTCAATTCCAGTGGGATCAAGTAGGCTATATGAGAAGCTGACAAGAATGGACTTGTCAAGTAACAGATTAGAAGGGAACTTTCCAGCAGAAATGGGGTTGTATAGAAATTTGAGGTACTTGAATCTGTCATGGAATGAGTTTAAGGCAAAGATTCCACCAGAAATGGGGTTGTTTGAGAATCTGAATGTGTTAGATATTAGAAGCAGTGATTTGTATGGTTCAATTCCTGGAGAATTGTGTGATTCTGGGAGTTTGAAGATTCTTCAACTTGATGGAAACTCTCTGGTTGGTCCAATTCCTGATGAGATTGGGAATTGTCTCTCACTTTACTTGCTGTAAGTATTATGCCATTGTGGTCCTTTCCTTCTCAATGTTTACATTTTTCCAAAAGTTTCTTTTCTTTTTACTTAACTAAGAATGAGATGGTGATTTTTAATTTTATAATATTGAACCCTAAACATAACTTTTATTCTTCTTTTTTTTCTTTTTAAAATGAACATAGTTCACATTAAATTAAAATTTTGATCTTGCCTTCAAAAAATTGTCAAAAGGGATTTTTTTTTTTTTGAGAATTTGTTTTGGGCGTGGAATTTGTGCTTTTCTTTAATGAATTTTGGTTTTTTATCCTAAATCTAGTTTTATGTCAATTATCGGAAAGCTAACCTCAATTTAATACCATTATAAATTAAAGATAGATTCAAAATAAAACCAGAAAATTTCCAATCATTATATGTATTTTTCCTTCATTTGGTTCATTCCTTATCTATATGAGTTTTTTTAAGAATAATTAAAAAAAAAAAACAAACTATTTACCTTTCCTAACAAGAAAAAAAAAACCCACAAATACAAAAGCTAGTAGATATTTGTTAATTTTGATAATTTTTCTTTATTTGTTTGAGTTAAATTAACTAGACTTAAATTCATGTTTAATAGGTTTAGAAACTATAAAATGTGTATAATTAGACCTTGAACTTTGGAGATCCTTAGATTAAATATTATTCTGATAGGTTTCTATTTAAAAAATCATATTAAATGTGGTGATAACCTGTTGAGTTTACTTTTGTATGGCAGGAGTTTATCCCACAACAATCTAAGTGGAGAAATTCCCAAGTCAATCTCCAAACTAAGCAAGTTAGAGATTCTAAGACTTGAATCAAATGAACTAAGTGGAGAAATACCTCAAGAGCTTGGAATTCTTCAAAACCTACTAGCTGTTAATATTTCATACAATATGTTAACAGGCAGACTTCCTGTTGGTGGCATTTTTCCAAGCTTAGATCAAAGTGCTTTGCAAGGAAACCTAGGCCTTTGCTCCCCTTTACTTAAAGGACCTTGCAAAATGAATGTCCCTAAGCCCCTTGTTCTTGATCCCAATGCCTATCCCAATCAAATGGGTGGCCAAAGCAGCAGAAACAGACCTTCACAATTATCTAATCATTCCTCACATCATGTTTTCTTCAGTGTCTCTGCCATTGTTGCCATCTCTGCTGCCACTTTGATTGCCCTTGGGGTGCTTGTAATCACCTTGCTCAATGTCTCTGCTCGGAGGAGATCGCTTGCGTTTGTCGACAATGCGTTGGAAAGCTGTTCGAGCTCTTCGAAATCAGGGACAGTCACTGCTGGTAAGCTTATTTTGTTTGATTCAAACTCAAAGGCATCGTTGAATTGGGTTAGTAACCATGAAGCCTTGCTGAATAAGGCCTCTGAGATTGGTGGTGGAGTTTTCGGAACGGTTTATAAGGTTTCATTGGGAGATGGAGGAGATGTAGCTATGAAGAAGCTTGTGAAATCAGACATTATTCAAAATCCGGAAGATTTTGACCGGGAAATCCGAGTTTTGGGGAAGGTTAAACACCCTAATTTGATCAGCTTAAAGGGTTATTATTGGACTGTTCAAACTCAGCTATTGGTAATGGAGTATGCTAACAATGGAAGTCTTCAAACTCAACTCCATGGAAGACTTCCTTCAGCTCCACCATTGTCTTGGGATAACAGGTTCAAGATTGTGCTTGGGACAGCCAAAGGACTAGCACATTTACACCACTCATTCCGCCCGCCAATCGTTCACTACAATCTAAAGCCAACCAACATCCTCCTCGATGAAAACTTCAACCCAAAGATCTCTGATTACGGGCTCGCAAGACTCCTAACAAAGCTTGACAAGCACGTCATGAACAACAGATTCCAAAGTGCATTGGGATACGTCGCACCGGAACTAGCATGCCAGAGCATAAGGGTGAATGAGAAATGCGACGTACACGGTTTTGGGGTGATGATTCTAGAGATCGTGACGGGACGAAGGCCGGTGGAGTATGGAGAAGACAATGTGGTTATATTGACAGACCATGTGAGGTATTTGCTTGAGAGAGGTAATGTGTTGGATTGTGTTGATCCAAGTATGACTCAATATTCAGAAGATGAAGTTGTGCCTATCCTCAAATTGGCTTTGGTATGCACTTCTCAAATTCCTTCAAGTAGGCCTTCCATGGCTGAAGTTGTGCAGATTCTTCAAGTTATCAAGGCTCCACTTCCTCAAAGAATATAAGATTTTGAGACAACTACTCTCAATTTCATTTCTCATTTTACCTTTGCTTTCATTCTCTTTTAATGTGTTCTTATAATGGATTGTTCTTAGTAGCTTTTTTTCATTCTTTGCGTTCAACATTTTAGAGGATGATGTGAATTAACTTAGTTTGTAATTTTCAAGCTTGAAATATAAGATGGCAAATTCAAAATAACTAAATTTCAATCGAAGTAAAATTATAACAGTTAGATAACTACAATTATTAT

Coding sequence (CDS)

ATGTCTTTCCTCTGTTTCTTCGCTCTTTCCCTTTTGGGATCCATCTCCACTCTTCTTCAAAATGCCATTGCCTTCAATGAACTTTATCCTCAACTCAACGACGATATCCTCGGCTTAATCGTTTTCAAATCCGACCTTCAAGACCCTTCTTCCGTTCTTTCCTCCTGGAGTGAAGACGATGACTCCCCTTGTTCTTGGAAGTTCATTAAATGCAACCCCATTAATGGCAGAGTTTCTGAGGTTTCCATTGATGGGTTGGGATTATCTGGGAGAATCGGAAGAGGGCTTGAGAAATTACAGCATCTCAAGGTATTGTCTCTCTCTGGGAATAATTTCACTGGGAATCTTAGTCCTCAGCTTGTTCTTCCTCCTAGTCTCGACAGAGTTAATTTCAGCGGCAATAGTTTATCTGGGCGGATTCCTGTTTCTCTTATCTCTATGTCTTCCATTAGATTTCTTGATTTTTCTGATAATCTCTTATCTGGGCCACTTCCTGATGAAATGTTTGTTAATTGTTCTTCTCTTCATTATCTTTCTCTTGCTTCTAATATGCTTCAAGGCCCTGTTCCCAACACATTGCCCACAAGGTGTTTATATTTAAACACTCTCAATCTTTCAACCAATCAATTCTCCGGTAGCTTAAATTTTGCTCCTGGGATTTGGTCTTTAGCAAGGCTGAGGACATTAGATCTCTCAAAAAATGATTTCTCTGGTGTTTTACCACAAGGGATTTCAGCTATTCATAATCTAAAAGAGCTCAAGTTGCAGAACAACCAATTCTCAGGGCCATTACCTTCAGACTTGGGATTATGCGTCCACTTAGCTACATTGGATGTCAGTGGAAACCGTCTCACCGGGCCGCTACCGAACTCAATGAGGCTCTTAACCTCCTTAACCTTCCTCAATATAGGATTCAACAGTTTTTCAGATGAGCTCCCACAGTGGATTGGAAACATGGGAAGGTTAGAATACATGGATTTCTCAAGCAATGGCTTCACTGGTAGTCTTCCCTTAACAATGGGGGGATTAAGATCGGTGAAATACATGAGTTTTTCAAACAATAAGCTGACTGGGAACATCCCAGAGACATTGATGGAATGTTCTGAGCTATCTGTGATCAAGCTTGAAGGAAACAGTTTGAATGGAAGGGTGCCAGAAGGGTTGTTTGAACTGGGGTTAGAGGAGATGGATTTGTCTAAGAATGAGCTGATTGGTTCAATTCCAGTGGGATCAAGTAGGCTATATGAGAAGCTGACAAGAATGGACTTGTCAAGTAACAGATTAGAAGGGAACTTTCCAGCAGAAATGGGGTTGTATAGAAATTTGAGGTACTTGAATCTGTCATGGAATGAGTTTAAGGCAAAGATTCCACCAGAAATGGGGTTGTTTGAGAATCTGAATGTGTTAGATATTAGAAGCAGTGATTTGTATGGTTCAATTCCTGGAGAATTGTGTGATTCTGGGAGTTTGAAGATTCTTCAACTTGATGGAAACTCTCTGGTTGGTCCAATTCCTGATGAGATTGGGAATTGTCTCTCACTTTACTTGCTGAGTTTATCCCACAACAATCTAAGTGGAGAAATTCCCAAGTCAATCTCCAAACTAAGCAAGTTAGAGATTCTAAGACTTGAATCAAATGAACTAAGTGGAGAAATACCTCAAGAGCTTGGAATTCTTCAAAACCTACTAGCTGTTAATATTTCATACAATATGTTAACAGGCAGACTTCCTGTTGGTGGCATTTTTCCAAGCTTAGATCAAAGTGCTTTGCAAGGAAACCTAGGCCTTTGCTCCCCTTTACTTAAAGGACCTTGCAAAATGAATGTCCCTAAGCCCCTTGTTCTTGATCCCAATGCCTATCCCAATCAAATGGGTGGCCAAAGCAGCAGAAACAGACCTTCACAATTATCTAATCATTCCTCACATCATGTTTTCTTCAGTGTCTCTGCCATTGTTGCCATCTCTGCTGCCACTTTGATTGCCCTTGGGGTGCTTGTAATCACCTTGCTCAATGTCTCTGCTCGGAGGAGATCGCTTGCGTTTGTCGACAATGCGTTGGAAAGCTGTTCGAGCTCTTCGAAATCAGGGACAGTCACTGCTGGTAAGCTTATTTTGTTTGATTCAAACTCAAAGGCATCGTTGAATTGGGTTAGTAACCATGAAGCCTTGCTGAATAAGGCCTCTGAGATTGGTGGTGGAGTTTTCGGAACGGTTTATAAGGTTTCATTGGGAGATGGAGGAGATGTAGCTATGAAGAAGCTTGTGAAATCAGACATTATTCAAAATCCGGAAGATTTTGACCGGGAAATCCGAGTTTTGGGGAAGGTTAAACACCCTAATTTGATCAGCTTAAAGGGTTATTATTGGACTGTTCAAACTCAGCTATTGGTAATGGAGTATGCTAACAATGGAAGTCTTCAAACTCAACTCCATGGAAGACTTCCTTCAGCTCCACCATTGTCTTGGGATAACAGGTTCAAGATTGTGCTTGGGACAGCCAAAGGACTAGCACATTTACACCACTCATTCCGCCCGCCAATCGTTCACTACAATCTAAAGCCAACCAACATCCTCCTCGATGAAAACTTCAACCCAAAGATCTCTGATTACGGGCTCGCAAGACTCCTAACAAAGCTTGACAAGCACGTCATGAACAACAGATTCCAAAGTGCATTGGGATACGTCGCACCGGAACTAGCATGCCAGAGCATAAGGGTGAATGAGAAATGCGACGTACACGGTTTTGGGGTGATGATTCTAGAGATCGTGACGGGACGAAGGCCGGTGGAGTATGGAGAAGACAATGTGGTTATATTGACAGACCATGTGAGGTATTTGCTTGAGAGAGGTAATGTGTTGGATTGTGTTGATCCAAGTATGACTCAATATTCAGAAGATGAAGTTGTGCCTATCCTCAAATTGGCTTTGGTATGCACTTCTCAAATTCCTTCAAGTAGGCCTTCCATGGCTGAAGTTGTGCAGATTCTTCAAGTTATCAAGGCTCCACTTCCTCAAAGAATATAA

Protein sequence

MSFLCFFALSLLGSISTLLQNAIAFNELYPQLNDDILGLIVFKSDLQDPSSVLSSWSEDDDSPCSWKFIKCNPINGRVSEVSIDGLGLSGRIGRGLEKLQHLKVLSLSGNNFTGNLSPQLVLPPSLDRVNFSGNSLSGRIPVSLISMSSIRFLDFSDNLLSGPLPDEMFVNCSSLHYLSLASNMLQGPVPNTLPTRCLYLNTLNLSTNQFSGSLNFAPGIWSLARLRTLDLSKNDFSGVLPQGISAIHNLKELKLQNNQFSGPLPSDLGLCVHLATLDVSGNRLTGPLPNSMRLLTSLTFLNIGFNSFSDELPQWIGNMGRLEYMDFSSNGFTGSLPLTMGGLRSVKYMSFSNNKLTGNIPETLMECSELSVIKLEGNSLNGRVPEGLFELGLEEMDLSKNELIGSIPVGSSRLYEKLTRMDLSSNRLEGNFPAEMGLYRNLRYLNLSWNEFKAKIPPEMGLFENLNVLDIRSSDLYGSIPGELCDSGSLKILQLDGNSLVGPIPDEIGNCLSLYLLSLSHNNLSGEIPKSISKLSKLEILRLESNELSGEIPQELGILQNLLAVNISYNMLTGRLPVGGIFPSLDQSALQGNLGLCSPLLKGPCKMNVPKPLVLDPNAYPNQMGGQSSRNRPSQLSNHSSHHVFFSVSAIVAISAATLIALGVLVITLLNVSARRRSLAFVDNALESCSSSSKSGTVTAGKLILFDSNSKASLNWVSNHEALLNKASEIGGGVFGTVYKVSLGDGGDVAMKKLVKSDIIQNPEDFDREIRVLGKVKHPNLISLKGYYWTVQTQLLVMEYANNGSLQTQLHGRLPSAPPLSWDNRFKIVLGTAKGLAHLHHSFRPPIVHYNLKPTNILLDENFNPKISDYGLARLLTKLDKHVMNNRFQSALGYVAPELACQSIRVNEKCDVHGFGVMILEIVTGRRPVEYGEDNVVILTDHVRYLLERGNVLDCVDPSMTQYSEDEVVPILKLALVCTSQIPSSRPSMAEVVQILQVIKAPLPQRI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LRT10.0e+0060.73Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=... [more]
Q9LY033.0e-23044.06Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis th... [more]
Q9LZV77.1e-21643.17Leucine-rich repeat receptor-like protein kinase PXC2 OS=Arabidopsis thaliana OX... [more]
C0LGE44.4e-14934.29Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidop... [more]
Q9M0G73.1e-13431.67MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1... [more]
Match NameE-valueIdentityDescription
XP_004152295.10.0100.00probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Cu... [more]
XP_008453972.10.096.82PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At... [more]
KAA0044606.10.096.62putative inactive leucine-rich repeat receptor-like protein kinase [Cucumis melo... [more]
XP_038904210.10.092.57probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Be... [more]
XP_023527644.10.089.01probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Cu... [more]
Match NameE-valueIdentityDescription
A0A0A0KZ110.0100.00Receptor protein kinase OS=Cucumis sativus OX=3659 GN=Csa_4G015810 PE=4 SV=1[more]
A0A5D3D0330.096.82Putative inactive leucine-rich repeat receptor-like protein kinase OS=Cucumis me... [more]
A0A1S3BXI70.096.82probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=... [more]
A0A5A7TR580.096.62Putative inactive leucine-rich repeat receptor-like protein kinase OS=Cucumis me... [more]
A0A6J1IRG50.088.91probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 295..319
e-value: 120.0
score: 4.6
coord: 247..271
e-value: 120.0
score: 4.5
coord: 223..246
e-value: 39.0
score: 8.4
coord: 99..123
e-value: 120.0
score: 4.6
coord: 535..559
e-value: 55.0
score: 7.2
coord: 439..463
e-value: 280.0
score: 1.4
coord: 147..171
e-value: 140.0
score: 3.7
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 726..994
e-value: 3.4E-42
score: 144.6
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 724..999
score: 34.98661
IPR013210Leucine-rich repeat-containing N-terminal, plant-typePFAMPF08263LRRNT_2coord: 33..72
e-value: 6.6E-10
score: 39.1
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 802..1004
e-value: 2.9E-50
score: 172.5
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 730..801
e-value: 2.9E-16
score: 61.4
NoneNo IPR availablePIRSRPIRSR000550-2PIRSR000550-2coord: 729..937
e-value: 4.3E-16
score: 56.3
NoneNo IPR availablePIRSRPIRSR630220-2PIRSR630220-2coord: 728..924
e-value: 2.6E-12
score: 43.5
NoneNo IPR availablePANTHERPTHR48056LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATEDcoord: 14..1006
NoneNo IPR availablePANTHERPTHR48056:SF39BNAA09G02190D PROTEINcoord: 14..1006
NoneNo IPR availableCDDcd14066STKc_IRAKcoord: 730..997
e-value: 4.19942E-86
score: 276.076
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 48..385
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 312..587
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 99..114
e-value: 1.1
score: 9.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 367..611
e-value: 6.1E-64
score: 218.2
coord: 31..90
e-value: 4.7E-8
score: 33.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 91..366
e-value: 4.9E-73
score: 248.4
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 730..752
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 727..1000

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16572.T1Cucsat.G16572.T1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0033612 receptor serine/threonine kinase binding
molecular_function GO:0005515 protein binding