Cucsat.G16282 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16282
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DEAD-box ATP-dependent RNA helicase 38-like
Location	ctg2246: 124821 .. 133054 (+)
RNA-Seq Expression	Cucsat.G16282
Synteny	Cucsat.G16282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAACCACCAAATTTATTGAAATTATTCAGAATCACGTGAAAATTGAGAAAAGAAAAGAAAAAGGAAAAAAAAAAAGAAAATGAACATCTTAATTTGGGAAAAAGGTTTCCGGGCTTCGTTTCCAACCTTCCAATTGAAAATAAATTGAGCAAATCAAAAGCCTTAAAAGAAAATCTCAACCTCCCTTCCTTAATTCCTCTCGGATCTTTTTTCTTAGGTCAATGAATTAGTTTTTTTTTTTTTTTTAGTGTGAAGAGAACAAAGGAACAAAATTGTGGGAGAGAAGGTGGAGAGATATTGAGGAAATAGTTGAGAGAAATTAGTTGGAAATCGTGGGTTTAGGGTTTTTTTCTATTTTGTTTCAGTTCCAATCACCGATGGCAGATCACGCGGCTCCAGACTCTACCACCAGCCTGTCGGCCGCTGCTGCTGCCACCACCGCCGACTCGAGTTCTGCCCCACCTATAGTTATCACACCAGTACCCAAACGAGCTTGGGGTGATGAAGAAGACGATGATGTGGTTGAATCTGGAGACTCATCCTCTGCGCCTTCCGAGTACTTGGAATCCCTTAAAATCCAAGACGATACAAATCTTGAAGAACCGATCGACTCTAACATCACAGCAGTAAGTTCCTCACTCTCTCCATCAAGTGTGCCAGCATGTCTAGGTTCAAATGGCTTATTGAAATTCCTGATCTGCATAAAGAACTGTTTTTGGGTAGTAGAATAATGAGAGGTTCCTTGTTATGCTATTCATTTAATTTATTTTTCATTTGGTATAGGTGACAACTGGTGATACTCCATATTCATCCGCTAGTACTTTTGAGGATTTGAATCTGTCTAAAGAGTTGTTAAAGGGTTTGTATGTTGAGATGAAATTCCATAAGCCAAGTAAAATCCAAGCTATAAGTTTACCTATGATCTTGACTCCTCCTTACAAAGATTTAATTGCTCAAGCACACAATGGTTCTGGAAAGACTACTTGTTTTGTGCTTGGGATGTTGAGTCGCGTTGATGTCAACTTGAAGGCTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGGTAAAATGCTCTCTAATGTTTAATTGGATGTCGGCTCTTAGTTATGTTTGATCTTATTTTTCTTTAATATAATAATTATGTTGGATTTTCATTTTTCTTTAATATAATAATTGCAGAATATTGAGGTTCTCAAGAAGATGGGAAAGTACACTGGGATAACTTCTGAGTGTGCTGTTCCTGCTGACAGTGCTAACTATATACCTATGTCAAAGCGACCACCGATAACTGCACAAGTTGTGATCGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTGTGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGTAAGTTATTACTTAGACTTCACATACTGTAGCATCTGTGTCCATGGAAGTAGTGATTCCTTCTTGATTTGTTATTGAAGAGCATAGTTTCTTAATTTGTACTTTTGTATCATTAATGATGAGTTAAGAGTAATAGTTATGTGTAGTAATTGTAAGGATGGATAGTTGTAGTTATTGTTCCTTTTTCTTTTTTGTTTTTTTTATTCAGGATGGCTTTCAGGATGATTCATTGAGAATCATGAGGGACATTGAGAGGAGTAGCCCTCATTGCCAGGTCTGCGTATAGTATTTAATAACCAATTGCAATCTCAACCATGATATCTCAGTAATCTCATTTTTCGTTTCTCTGTTGTTGAAAACTTTGTTTCAGGTGCTTCTGTTCTCTGCTACATTCGATGAGAATGTTAAGAACTTTGTCTCTAGGGTTGTTAAAGACTACAACCAACTTTTTGTAAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCGGATGAATTAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGAACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGAGGTGACTACCATTCAAGGGGCATTGACAACTGAAATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAGCAGGTACGAATATTATTTCCCCATCATCTCTTTTGTCTGTTGATAGTATATCTTGCGACCTCTTCATGGATGCCTAATATATGTTTCTTTTTTAGGTCAATCTAGTTATCAATTACGATCTTCCTCTTAAATATGAACCTTCTCCACAAGCGACAAAATATAGATCTTCCTCGTTATCTGAGCCTAACTATGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGTAAGTTTCTGTGTCTATTATACTTGGGTACATGTTTTTCTAGATTATTGTAATCTTCCTGCCCTAACCTTGGATATGCCTTCATGTCTTGATTATTGAAGCTAAGCAACTTTATTGGGGTTAGATTCAACTCTTAAAATAGCTATTTAATATTGCATCATCCTTACGAATCTATTTCTTTGTTTAAATAAGTGAAAGGAGTTTATGAAAAGATACTTCTTGAATCGAATTACTCAATTCAAAGGAGCCAGCTTTTATACTGGACCTTGAACCAAATGAATGCAACCATGAGCCACCTATAGGTTAAAAGAATTATCACATGGTAGTTACTAAAACTTAAATGTCAGCCTACTACAACATAACTGAACAACAAAGAATTAAAGTAATAATAAGTCTCGAACAGTCCCTAACAAGAAACTATGTAAATTCCCCCACCAAGCAAATAAAACTCCTCCTCGAGTTAGTCAGAGAGCTGAAAAGAATCTGGAGCCAAGTATTCTGAAACATTAAAAACAGGACTAATCCTCAAATCTTCTGGAATATCAATTTTGTGGCGTTGTTTCCATATATCTTCAAAATGTGAAAAGGTCCCAACTTCTTATGCTTTGTTTTCTGTAAGTACTCACTGGAAATTGAGATTTTGTTAAGTGAATCATGGCAAGATCATCCTCTTGGAACTCTTTGGTGCTCAACCTTCTGTTTATGGGTAGTAGTCATCTTGGAAATTTGAGTAGCCACATTTTATGTAATTCAACTCTCCTTTTCGCCACAATACCTGCTTCTTGGCTAAAATCAATAGAGGAATGAATATTAGTCAAGTCAATTTAATGTAGACAATTTCAAATAGTGACATCCCTATTGTCCTATTCTTCATATGATCCCTATTGTCCTATTCTTCATATGATTGTAGGCAATTTTGCTTGAGGGGAGAGATCCCATTGTTTTGGTCGATCATTGCTCAAGCATCGAATTAGATTACCAAGAACTCGATTAATTACCTCCCTTTGGCCATTAGTTTGAGGATGGCTGGTTGTGCATAATTTTAACTTGCATGGAACTTCTTCCACAATGCCTTCCAAAAATAGCTAAGAAATTTAATATCCCTGCCTGAGACAATGGATTTTGCTATGCTGTGTAATCAAACTATTGAAAGAAGAAAAGAGAAGAAACAAACTATTTTACGTGGAAACCCTAGAACAGGGAGGAAAACCACGATGCTATTTTCTTATTATTTTTCTATATCTCATAATGATATAGGGAACATTTATTTATAGGTTGTAGAACCTAAAATAAAAATAATAAAAGATAATTAGGACACTATAAAATCTTAACAAACTCTCGGGCTTTCAACATACAACAAGCTTGCTAATTCTAACACCCCCCTCAAGTCAGGTCGTAAATGTCATAAAAACCTTTGTCTTAGAAGCCTTTTTGTGAGAATATTAGCAATTTGTTGGCTTGATGGTATGTAAGGAATGTTGATGCTACTATTGTCCAATTTCTCTTTGGTAAAGTGTCTGTCAATCTCTACATGTTTAGTTTTGTCATGTTGGGCCTGGTTATTAGCAATGTTGATAGCCGCCTTATTATCACAAAAAAGTTTCATAGGCACCTCATAGTTTTGGTAAAGATCAGATAACACCTTTTGAAGCCAAATTTCCTCACAAATTCCCAAACTCATGGCTCTGTATTCAGCTTCAGCACTACTCCTTGCAACAACCCCTTTTCTTGCATTCATGAACCTCTTTCCGTAAAGTATATAGGCGAGAGACATTTTGAAGTTTGGAATACAGTTTCTAGGCTGTGTCCTAAATATCCTTCGTAGTTGCAGCGTAGAGTAAAGGTTTGCCAATCTATGGCTCCATGCTATTGATTAATGTGGGTTTAAGAAGAGAATTCTTCCCCTTTCAGTACCGTTCCTAAGGGTTCCCAGGTGGAGGACTAGGTATTTCCCTTATCAAGAAACTGAATTTATGCCACCCTTCAAGAACTATTTTCACTGACTGGGACCATGAGAAATAATTATTGTTCAATTTTTCCCTGAAAAATGTCATGTAGACTGTGCCACTGTATTAGTCACGTAAGGAGAGGATAGAGAGGGGAACGAGACTATCGGATTTTCAAAATACATAGGTCGCCTAGGAGTATTGGATGTTGCCCCTAAGGTCGCCTCAAGTGCCACAATCTGCTATCTAAGCTTCTCTAGTTGCTGGTGAGCTATATTTGAAGAAGAAGAGATTGGCACGTTAGGGTTGGAATGTGTCGAAGACTCTCCAACTTCAAATGTTGAGTAGATTTGGGGATACCCAACCCCGGGATGATAGCTAGGGTTTGGAACAAAATCAATGGATGGCAAGGCATACAACTTGGTCGGCAGAAGCGGCGGTGGCTTGACGAAGGTAAATGGCAGAACATGAAGCGGTGCGTGGGTGGCATTAATGGTTGCGGATGAAGGCAAGGGTGGCAGGGATGAGTTGGTCGGCTCTTTCTGAACGAGATGGGTAGGTTCAGAGGTCTTTGGCGGTAAGGCGTGGATCACGTATGGTGGAGAAAATGCTGGGTTCAGGATTGTCGGTGCTGTCTGAAGTCCTCGAAACCATTCATCCATGGCAGCACCAATACGAGCATTGACAGTGGTGGCAACGACAGTGCTAATGGCGGCTGTTTCCTCTGGTTGGTTTCCAGCAAATGTTTGACCTTCTAGGGTTTCTTCGACACCTTGCTTTGATACCATATTGAAAGAAAAGAGAAGAAACAAACTATTTTATGCAGAAACCCTAAAACAGAGACAAAAACCATGATGCTATTTTCTTATTATTTTTCTATATCACATAATGATATAGGGAACATTTATTTATAGGTTGTAGAACCCAAAATAATAAAAAAAAAAATAGTTAGGGCACTCTAAAGTCTTAACAAACTCTTGGGCTTTCAACATAAAACAAGCCTGCTAATTCTAACACAAACAATTTCCTTAAAAGATAGATTAGCATTAGCCATATAAGTTGCATCGGATGTTTTCTTGCAAGGTTAAAAAATGAGACATGTTGCTGAACCTATCAACCACTACAATAATCAGCTGAGAACCCCATTAGACATAGGATAAAATGCATCGATAAGTCTTCCCAAGTACTCTTGAGAATAGGTAATGGGCAATAGAGCCACGCGTTGTGTTTCTGCCCTTTTGATGTTTGGCAAGCAAAGCATATTCTAACATAGTTAGAGACGGCTTTTCTCAATTGAGGCTAAAAGTATCTATCACTCATAATTTGGAATGTGTTATTGACTTAAGCCGCCTCCAGGGAATTCTTTGATCAATGAATCTCAAAGAAATTTATGTGGAATACACAATTGATTGTTCTTAAAAAGGTAACCATTGACTATATGGAATTCACCACAATTGACACGAATATTACAATTATGCCAATGGGTACCAAAATCAACATCGTTTGGATATAAAGATGTGAGATGGTTGTGCGTGAATCAAACCTTTGGATAAATGATGACCAACGAGCATGCATTTGGTTGATAGACTTTAGTGTCTTTAGACATCACGTTGTCCTAGTCTTCCTTGTCTCTCTCCACATTAATGGTCATTGGAACCTCTTTCACATCATTAATACTTTCTTTGAAAGTGTCCACTAAGAACCCTTTATCTATCACAGTTTATTTAATGCGAAGTATATTTAAAGAATTCGACAAATTTACCCAGAAGTGAGTACGCACTGGGTAAAGATGGTGGAATAAAACCCAAAGAGGAGTGAGTTTGAGATACCATTGGGGATTCAAAATGTGACTTCGCTCTGACATCTTCCTTATAATAAACAGCAGCTGTGAAGGATCTCCAACAATTTCTGTTCAGACCAGCAGGGCTATGATTGTTTCTTCTTCCACCTGTAGAAGGCCATACTGCTATCTCCACGTATCATCTATCTTGGATCGAAATTTGGCCAGACAAATAAGTCCTTACTCCATTTTGTTCTTAATAGAGAAGAAAATGTAAGATTGATCCTGCAGAAGTTCATACAATCTTTCTTCAACCCATTGCATAGTTTCTGGACTAACGGTAGTTTTCTAGTATTTTTTCAAATCTTCCACAGAAAAACCAAACACTTTCCAAATGCGAAAAAAAATAGTTACTAATATTGCAGCTTTTGATTTCCATGATAACAAAAGTGGGGTTTAAATGTCTAATTGAGGGAAAAGGAAGTATGGTGATAATGTGCAAGGAATAACCAGAAAAATTGGAGCAGCCCACCAGCGTTACTGCTGGGGAGGATAGAGGAAATAGGAGAGGGGATAGAAGGCAGCATACGTACTGGCATTACTTTCTCTGTATCTGTCACTGTAGGCTCTTAAGACCATTGTAGAGGGTTGAGTATTAAAGAAGTATGTTACTGAAAGGCTCTTAAGACCATTGGTTGATCACTAGAAGGATCGTTCGCTTGAATTTGTTTAGTGAACTCGATGTTATTTGTTTGACAAGGGGCAGATTTGTTATCTAAAAAATTTGGGCATATTGATCTTCATTTTATATTCTCGTTGATGTTCTTGATCTTCGCATTGCTTACTTCTTAAAAATTTCTGTCCCAAAAGATCACCCTCATCCGAAGAAGATTTAGAATCTTGATCTTGATCGTGCTCTAAGGCGCTATACATCTAGCTTCTTGGTTACTCAGTTGTGGTTGTGTCATTGTTCCCATCAGGAAATGCACATTTTGTCCCTAAGTGTCAAAATATCATCCATTGAATTCTTGACTACCAGCAAGCACAGTCATTGATTATACCGGAGGATTAAGTTGGGCTTTCATATCCCTAACTCTATTGGTAGTTGCGACGTCCTTTCCAGTCATGAGCTCCGCAGAATCTTGGAGCTATCTGATACCAGCTTGATGATGTAAACAACTTGAGGGAGAGAGATTATTCATAAGTACCTCTTAAATTGAAAGGTGCCAGCTTTTATGAGAAAATTACTACTACCTTGATTATTTGACACATCATTAAATATTTAATGTGTAGACCTACAATTCTTAATACCTTCTTAGGTGGCAAGAAATAAATAGAGGTAAAAAAAAATTTCCTCACACTGGACCTTCAACCAAATTAGGACAACTAAAACATAACAACAAACAATATTATGCAAGTCTCAAACAAGAAACTACAAGGTTGCTCTTTTTTTATTGATTTGCAAACTCTTCTGTAGTTTGAATTTGCTTAGAAAGATCCTTAATTGAACTTTTCTTTTGATATTTTGTTAACTGAAAACTCACGACTGTTGTGTTATTCTACAGGAGCTGTGTTTAACTTGCTGTGTGGCGATGAGGAAATCATGCTAATGGACAAAATTCAGAACCATTTTCGCTCTGAAATAATAGAGGTATAAAGATTTCTTCTCCACTCGTTTCCCGATCTGCCTTGATATCAAATTTCTATCTCAGTATCTTTTGAAATTTGAATATTAGGTTCGAGACTCTGAAGACGACATTCAGACAGCCTTAAAAGCTGCCGGATTGGTTTGATGTATAGAAATGAGTTTATCATAGTTGATTTCCATTGATGCCAACCACGCACCAAAGGCGATAAACATGGAACAGTTGGATGAAAAAAAAATGGATCGAATCAAAATCGAGGCTTCGTAGTTTTTTGTTTTGCTTTAAAGTTGAAAGGAAATTACATGTGGTTGAGGTATTTAGTGTTTTTGAGTTTGTCAATTTCTGGCGTATGGTTAGACTGTTGTATATTGTGATGGTCACGGGAGAGCATCGAGTTAAATGTTAAATTTCGTTATTTAAATTTTAGATATGTATCTTTATGGACCCTGAACTTTATATTTGTGCAATAAATTTCTGAACTTTTATTTTTGTATGCATTAAGGTACATTAAAAAAAATCAATCCAAAAATATTTAAAAAGTTAAAATGTTCT

Coding sequence (CDS)

ATGGCAGATCACGCGGCTCCAGACTCTACCACCAGCCTGTCGGCCGCTGCTGCTGCCACCACCGCCGACTCGAGTTCTGCCCCACCTATAGTTATCACACCAGTACCCAAACGAGCTTGGGGTGATGAAGAAGACGATGATGTGGTTGAATCTGGAGACTCATCCTCTGCGCCTTCCGAGTACTTGGAATCCCTTAAAATCCAAGACGATACAAATCTTGAAGAACCGATCGACTCTAACATCACAGCAGTGACAACTGGTGATACTCCATATTCATCCGCTAGTACTTTTGAGGATTTGAATCTGTCTAAAGAGTTGTTAAAGGGTTTGTATGTTGAGATGAAATTCCATAAGCCAAGTAAAATCCAAGCTATAAGTTTACCTATGATCTTGACTCCTCCTTACAAAGATTTAATTGCTCAAGCACACAATGGTTCTGGAAAGACTACTTGTTTTGTGCTTGGGATGTTGAGTCGCGTTGATGTCAACTTGAAGGCTCCTCAGGCGTTTTGCATATGTCCTACAAGGGAGTTAGCCATGCAGAATATTGAGGTTCTCAAGAAGATGGGAAAGTACACTGGGATAACTTCTGAGTGTGCTGTTCCTGCTGACAGTGCTAACTATATACCTATGTCAAAGCGACCACCGATAACTGCACAAGTTGTGATCGGAACTCCTGGCACAATAAAGAAATGGATGTCATCGAGGAAGTTGGGAGTAAGTTGTGTGAAGATTCTTGTTTTTGATGAGGCTGATCATATGCTTGGCGAGGATGGCTTTCAGGATGATTCATTGAGAATCATGAGGGACATTGAGAGGAGTAGCCCTCATTGCCAGGTGCTTCTGTTCTCTGCTACATTCGATGAGAATGTTAAGAACTTTGTCTCTAGGGTTGTTAAAGACTACAACCAACTTTTTGTAAAGAAGGAAGAACTATCTTTGGAGAGTGTGAAGCAATACAAGTTGATATGTCCGGATGAATTAACTAAAATTCGAGTCATAAAAGATAGAATTTTTGAACTTGCAGACAAATTGGGTCAGACAATTATATTTGTGCGAACAAGAAACAGTGCTGGCATGTTACATAAGGCACTAGTTGATCTTGGTTATGAGGTGACTACCATTCAAGGGGCATTGACAACTGAAATTAGAGACAAAATAATAAAAGAGTTCAAGGATGGTTTGACCAAAGTTCTTATTTCGACTGACCTTCTAGCTCGAGGCTTTGATCAGCAGCAGGTCAATCTAGTTATCAATTACGATCTTCCTCTTAAATATGAACCTTCTCCACAAGCGACAAAATATAGATCTTCCTCGTTATCTGAGCCTAACTATGAGGTGTACCTTCATAGAATTGGTCGGGCAGGTCGTTTTGGGCGCAAGGGAGCTGTGTTTAACTTGCTGTGTGGCGATGAGGAAATCATGCTAATGGACAAAATTCAGAACCATTTTCGCTCTGAAATAATAGAGGTTCGAGACTCTGAAGACGACATTCAGACAGCCTTAAAAGCTGCCGGATTGGTTTGA

Protein sequence

MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCVKILVFDEADHMLGEDGFQDDSLRIMRDIERSSPHCQVLLFSATFDENVKNFVSRVVKDYNQLFVKKEELSLESVKQYKLICPDELTKIRVIKDRIFELADKLGQTIIFVRTRNSAGMLHKALVDLGYEVTTIQGALTTEIRDKIIKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPLKYEPSPQATKYRSSSLSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDEEIMLMDKIQNHFRSEIIEVRDSEDDIQTALKAAGLV

Homology

[Close]

BLAST of Cucsat.G16282 vs. ExPASy Swiss-Prot
Match: Q93ZG7 (DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 PE=1 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 7.4e-78
Identity = 159/245 (64.90%), Postives = 192/245 (78.37%), Query Frame = 0


Query: 16  AAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEYLESLKIQD----DT 75
           +++++T ++S++         K+ WGD EDDD     D   A SE L SL I++    D+
Sbjct: 14  SSSSSTVEASNSAEKTEPTTEKKKWGDVEDDD-----DEEEAVSE-LNSLSIKEEEKPDS 73

Query: 76  NLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPSKIQAISLPMIL 135
            LEEP DSNI AVT+GDTPY+SAS FEDLNLS EL+KGLYVEMKF KPSKIQAISLPMI+
Sbjct: 74  ILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIM 133

Query: 136 TPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNIEVLKKMGK 195
           TPP+K LIAQAHNGSGKTTCFVLGMLSRVD  L+ PQA CICPTRELA QN+EVL+KMGK
Sbjct: 134 TPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGK 193

Query: 196 YTGITSECAVPADSANYIPMSKR-PPITAQVVIGTPGTIKKWMSSRKLGVSCVKILVFDE 255
           +TGIT+E AVP DS    P + R  P++A VVIGTPGT+KKWM+ ++LG++ +KILVFDE
Sbjct: 194 FTGITAELAVP-DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDE 251

[Close]

BLAST of Cucsat.G16282 vs. ExPASy Swiss-Prot
Match: Q10RI7 (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0158200 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.6e-64
Identity = 143/265 (53.96%), Postives = 175/265 (66.04%), Query Frame = 0


Query: 2   ADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSEY 61
           AD    +   + +AAAA   + SSS  P V          D +   +     S S P E+
Sbjct: 16  ADVEEEEEAKAKAAAAAEAASSSSSNEPAV----------DAQAKQI--EALSLSVPEEH 75

Query: 62  LESLKIQDDTN---LEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHK 121
             S    DD     L++  +S I AVT+G T Y SA+ FEDL L+ ELLKGL+ EM F +
Sbjct: 76  GGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSR 135

Query: 122 PSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTREL 181
           PSKIQA++LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVD N K  QA CICPTREL
Sbjct: 136 PSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTREL 195

Query: 182 AMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKL 241
           A QN  VL +MGK+TGIT  CA+P    +Y+P++K P IT QVVIGT GT+ KW++ +K+
Sbjct: 196 AQQNKSVLMRMGKFTGITCACAIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKWINHKKI 255

Query: 242 GVSCVKILVFDEADHMLGEVSYYLD 264
             + +KILVFDEADHML E  +  D
Sbjct: 256 LTNDIKILVFDEADHMLAEDGFRSD 268

[Close]

BLAST of Cucsat.G16282 vs. ExPASy Swiss-Prot
Match: Q75C39 (ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP5 PE=3 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 4.8e-37
Identity = 93/214 (43.46%), Postives = 135/214 (63.08%), Query Frame = 0


Query: 46  DDVVESGDSSSAPSEYLESLKIQDDTNL---EEPIDSNITAVTTG-DTPYSSASTFEDLN 105
           +  +E+G + SAPS   E+ + + D+NL   E  +   +  +    ++P  S  +FE+L 
Sbjct: 25  ETTLEAGSAESAPSAPAEN-QAKSDSNLINSEYEVKVRLADIQADPNSPLYSVKSFEELG 84

Query: 106 LSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVD 165
           L+ ELLKGLY  MKF KPSKIQ  +LP++L  P +++IAQ+ +G+GKT  F L MLSRVD
Sbjct: 85  LAPELLKGLYA-MKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLSRVD 144

Query: 166 VNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQV 225
           V + A QA C+ P+RELA Q +EV+++MGK+T I S+  VP DS       K   I A +
Sbjct: 145 VAVPATQAICLAPSRELARQTLEVIQEMGKFTKIASQLIVP-DS-----YEKNKAINAHI 204

Query: 226 VIGTPGTIKKWMSSRKLGVSCVKILVFDEADHML 256
           ++GTPGT+   M  + + +  VK  V DEAD+ML
Sbjct: 205 IVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNML 230

[Close]

BLAST of Cucsat.G16282 vs. ExPASy Swiss-Prot
Match: A5DZX2 (ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP5 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.8e-37
Identity = 89/212 (41.98%), Postives = 133/212 (62.74%), Query Frame = 0


Query: 44  EDDDVVESGDSSSAPSEYLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLS 103
           E D+  +   S +      E+  I++   +E  +D         ++P  S  +FE+L L 
Sbjct: 68  EKDENKDKSQSEAKDDSKRETNLIENRYEVEVKLDD---IQADPNSPLYSVKSFEELGLK 127

Query: 104 KELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVN 163
            ELLKGLY  MKF+KPSKIQ  +LP++++ P K++I Q+ +G+GKT  F L MLSRVD +
Sbjct: 128 PELLKGLYA-MKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDES 187

Query: 164 LKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVI 223
           +KAPQ  C+ PTRELA Q +EV++ MGKY+ IT +  VP DS     + +   I+AQV++
Sbjct: 188 IKAPQCICLAPTRELARQTLEVVETMGKYSNITYQLVVP-DS-----VPRGQAISAQVLV 247

Query: 224 GTPGTIKKWMSSRKLGVSCVKILVFDEADHML 256
           GTPG +   ++ + + V+ VK+ V DEAD+ML
Sbjct: 248 GTPGIVHDLINRKAINVAKVKVFVLDEADNML 269

[Close]

BLAST of Cucsat.G16282 vs. ExPASy Swiss-Prot
Match: Q6CJU1 (ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP5 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.3e-37
Identity = 90/217 (41.47%), Postives = 130/217 (59.91%), Query Frame = 0


Query: 50  ESGDSSSAPSEYLESLKIQDDTNLEEPIDSNITA-----------VTTGDTPYSSASTFE 109
           E  D++S      E  K   +T  EEP +  I +               ++P  S  +FE
Sbjct: 26  EDNDTTSETKVEKEDAK---ETKAEEPANKVINSEYEVKVNLADLQADANSPLYSVKSFE 85

Query: 110 DLNLSKELLKGLYVEMKFHKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLS 169
           +L LS+ELLKGLY  MKF KPSKIQ  +LP+++  P  ++IAQ+ +G+GKT  F L ML+
Sbjct: 86  ELGLSEELLKGLYA-MKFQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLTMLT 145

Query: 170 RVDVNLKAPQAFCICPTRELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPIT 229
           RVD N+ + QA C+ P RELA Q +EV+++MGK+T  +S+  VP DS       +  PIT
Sbjct: 146 RVDPNVNSTQAICLSPARELARQTLEVIQEMGKFTKTSSQLVVP-DS-----FERNKPIT 205

Query: 230 AQVVIGTPGTIKKWMSSRKLGVSCVKILVFDEADHML 256
           A +V+GTPGT+   +  + L +  +K+ V DEAD+ML
Sbjct: 206 ANIVVGTPGTVLDLIRRKMLNLGSIKVFVLDEADNML 232

[Close]

BLAST of Cucsat.G16282 vs. NCBI nr
Match: XP_004150128.2 (DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus] >KAE8648330.1 hypothetical protein Csa_023068 [Cucumis sativus])

HSP 1 Score: 499 bits (1284), Expect = 1.96e-173
Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE
Sbjct: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
           SCVKILVFDEADHMLGE  +  D
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDD 263

[Close]

BLAST of Cucsat.G16282 vs. NCBI nr
Match: XP_008463114.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo] >XP_016902981.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo])

HSP 1 Score: 487 bits (1254), Expect = 7.05e-169
Identity = 250/263 (95.06%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MADH APDST+ +SAAAAA TADSSSAPP+V TPVPKRAWGDEEDDDVVESGDSSSAPSE
Sbjct: 1   MADHTAPDSTSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKIQD+TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIQDETNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
           SCVKILVFDEADHMLGE  +  D
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDD 263

[Close]

BLAST of Cucsat.G16282 vs. NCBI nr
Match: KAA0066182.1 (DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo var. makuwa] >TYK15222.1 DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo var. makuwa])

HSP 1 Score: 487 bits (1254), Expect = 7.29e-169
Identity = 250/263 (95.06%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MADH APDST+ +SAAAAA TADSSSAPP+V TPVPKRAWGDEEDDDVVESGDSSSAPSE
Sbjct: 1   MADHTAPDSTSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKIQD+TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIQDETNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
           SCVKILVFDEADHMLGE  +  D
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDD 263

[Close]

BLAST of Cucsat.G16282 vs. NCBI nr
Match: XP_038906287.1 (DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906288.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906289.1 DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida])

HSP 1 Score: 454 bits (1169), Expect = 6.38e-156
Identity = 236/267 (88.39%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MADHAAPDSTTS---LSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSA 60
           MADHAAPDSTTS     AAA AT  D SS+ P ++TPVPKRAWGDEEDDDV ++GDSSSA
Sbjct: 1   MADHAAPDSTTSDASAPAAATATATDGSSSAPPIVTPVPKRAWGDEEDDDVGDTGDSSSA 60

Query: 61  PSEYLESLKIQDD-TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKF 120
           PSEYLESLKI+DD T L+EPIDSNITAVTTG TPY+SASTFEDLNLSKELLKGLYVEM+F
Sbjct: 61  PSEYLESLKIEDDETTLDEPIDSNITAVTTGGTPYTSASTFEDLNLSKELLKGLYVEMRF 120

Query: 121 HKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTR 180
           HKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTR
Sbjct: 121 HKPSKIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTR 180

Query: 181 ELAMQNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSR 240
           ELAMQNIEVLKKMGKYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSR
Sbjct: 181 ELAMQNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSR 240

Query: 241 KLGVSCVKILVFDEADHMLGEVSYYLD 263
           KLGVSCV+ILVFDEADHMLGE  +  D
Sbjct: 241 KLGVSCVRILVFDEADHMLGEDGFQDD 267

[Close]

BLAST of Cucsat.G16282 vs. NCBI nr
Match: XP_038876100.1 (DEAD-box ATP-dependent RNA helicase 38-like [Benincasa hispida])

HSP 1 Score: 448 bits (1152), Expect = 1.92e-153
Identity = 234/263 (88.97%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MAD AA DS+T+ ++AAA  T  SSSAPP+V TPVPKRAWGDEEDDDV ++GDSSSAPSE
Sbjct: 1   MADQAAADSSTTNASAAA--TVGSSSAPPVV-TPVPKRAWGDEEDDDVGDTGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKI+D++NLEEPIDSNITAVTTGDTPY+SASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIEDESNLEEPIDSNITAVTTGDTPYTSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGIT ECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITFECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
             VKILVFDEADHMLGE  +  D
Sbjct: 241 GSVKILVFDEADHMLGEDGFQDD 260

[Close]

BLAST of Cucsat.G16282 vs. ExPASy TrEMBL
Match: A0A0A0KR39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G308770 PE=4 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 3.41e-174
Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE
Sbjct: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
           SCVKILVFDEADHMLGE  +  D
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDD 263

[Close]

BLAST of Cucsat.G16282 vs. ExPASy TrEMBL
Match: A0A1S4E419 (DEAD-box ATP-dependent RNA helicase 38-like OS=Cucumis melo OX=3656 GN=LOC103501340 PE=4 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 3.41e-169
Identity = 250/263 (95.06%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MADH APDST+ +SAAAAA TADSSSAPP+V TPVPKRAWGDEEDDDVVESGDSSSAPSE
Sbjct: 1   MADHTAPDSTSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKIQD+TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIQDETNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
           SCVKILVFDEADHMLGE  +  D
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDD 263

[Close]

BLAST of Cucsat.G16282 vs. ExPASy TrEMBL
Match: A0A5A7VCW5 (DEAD-box ATP-dependent RNA helicase 38-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G001030 PE=4 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 3.53e-169
Identity = 250/263 (95.06%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MADH APDST+ +SAAAAA TADSSSAPP+V TPVPKRAWGDEEDDDVVESGDSSSAPSE
Sbjct: 1   MADHTAPDSTSDVSAAAAAVTADSSSAPPVVTTPVPKRAWGDEEDDDVVESGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           YLESLKIQD+TNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS
Sbjct: 61  YLESLKIQDETNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGEVSYYLD 263
           SCVKILVFDEADHMLGE  +  D
Sbjct: 241 SCVKILVFDEADHMLGEDGFQDD 263

[Close]

BLAST of Cucsat.G16282 vs. ExPASy TrEMBL
Match: A0A6J1F4Z0 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita moschata OX=3662 GN=LOC111442167 PE=4 SV=1)

HSP 1 Score: 446 bits (1147), Expect = 5.69e-153
Identity = 231/257 (89.88%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MAD AAPDSTTS +++AAA  A S++ PP+V TPVPKRAWGDEEDDDV + GDSSSAPSE
Sbjct: 1   MADPAAPDSTTSNASSAAAAVAVSATTPPVV-TPVPKRAWGDEEDDDVGDVGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           Y+ESLKIQD+  LEEP DSNITAVTTGDTPYSSASTFEDLNLS E+LKGLYVEMKF KPS
Sbjct: 61  YMESLKIQDEKTLEEPEDSNITAVTTGDTPYSSASTFEDLNLSPEILKGLYVEMKFQKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGE 257
           SCVKILVFDEADHML E
Sbjct: 241 SCVKILVFDEADHMLSE 256

[Close]

BLAST of Cucsat.G16282 vs. ExPASy TrEMBL
Match: A0A6J1IXW1 (DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita maxima OX=3661 GN=LOC111481623 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 3.05e-152
Identity = 230/257 (89.49%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MADHAAPDSTTSLSAAAAATTADSSSAPPIVITPVPKRAWGDEEDDDVVESGDSSSAPSE 60
           MAD AAPDSTTS +++AA+  AD+++ PP+V TPVPKRAWGDEEDDDV ++GDSSSAPSE
Sbjct: 1   MADPAAPDSTTSNASSAAS--ADAATTPPVV-TPVPKRAWGDEEDDDVGDAGDSSSAPSE 60

Query: 61  YLESLKIQDDTNLEEPIDSNITAVTTGDTPYSSASTFEDLNLSKELLKGLYVEMKFHKPS 120
           Y+ESLKIQD+  LEEP DSNITAVTTGDTPYSSASTFEDLNLS E+LKGLYVEMKF KPS
Sbjct: 61  YMESLKIQDEKTLEEPEDSNITAVTTGDTPYSSASTFEDLNLSPEILKGLYVEMKFQKPS 120

Query: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180
           KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM
Sbjct: 121 KIQAISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAM 180

Query: 181 QNIEVLKKMGKYTGITSECAVPADSANYIPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240
           QNIEVLKKMGKYTGITSECAVPADSANY+PMSKRPPITAQVVIGTPGTIKKWMSSRKLGV
Sbjct: 181 QNIEVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGV 240

Query: 241 SCVKILVFDEADHMLGE 257
           SCVKILVFDEADHML E
Sbjct: 241 SCVKILVFDEADHMLSE 254

The following BLAST results are available for this feature:

BLAST of Cucsat.G16282 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZG7	7.4e-78	64.90	DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 P...	[more]
Q10RI7	3.6e-64	53.96	DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q75C39	4.8e-37	43.46	ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109....	[more]
A5DZX2	4.8e-37	41.98	ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus (strain ATCC 11503 ...	[more]
Q6CJU1	6.3e-37	41.47	ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ...	[more]

BLAST of Cucsat.G16282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150128.2	1.96e-173	98.10	DEAD-box ATP-dependent RNA helicase 38 [Cucumis sativus] >KAE8648330.1 hypotheti...	[more]
XP_008463114.1	7.05e-169	95.06	PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo] >XP_016902...	[more]
KAA0066182.1	7.29e-169	95.06	DEAD-box ATP-dependent RNA helicase 38-like [Cucumis melo var. makuwa] >TYK15222...	[more]
XP_038906287.1	6.38e-156	88.39	DEAD-box ATP-dependent RNA helicase 38 [Benincasa hispida] >XP_038906288.1 DEAD-...	[more]
XP_038876100.1	1.92e-153	88.97	DEAD-box ATP-dependent RNA helicase 38-like [Benincasa hispida]	[more]

BLAST of Cucsat.G16282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR39	3.41e-174	98.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G308770 PE=4 SV=1	[more]
A0A1S4E419	3.41e-169	95.06	DEAD-box ATP-dependent RNA helicase 38-like OS=Cucumis melo OX=3656 GN=LOC103501...	[more]
A0A5A7VCW5	3.53e-169	95.06	DEAD-box ATP-dependent RNA helicase 38-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1F4Z0	5.69e-153	89.88	DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IXW1	3.05e-152	89.49	DEAD-box ATP-dependent RNA helicase 38 OS=Cucurbita maxima OX=3661 GN=LOC1114816...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 359..459 e-value: 4.3E-24 score: 96.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 331..459 e-value: 5.2E-24 score: 84.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 333..499 score: 20.049461
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 115..320 e-value: 8.6E-38 score: 141.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 129..305 score: 24.108728
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 78..311 e-value: 6.7E-56 score: 190.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 312..499 e-value: 8.0E-41 score: 141.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 167..479
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 121..293 e-value: 7.7E-35 score: 120.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..28
None	No IPR available	PANTHER	PTHR47958:SF31	DEAD-BOX HELICASE DBP80	coord: 72..490
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 72..490
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 317..468 e-value: 4.06432E-40 score: 139.565
None	No IPR available	CDD	cd17963	DEADc_DDX19_DDX25	coord: 102..305 e-value: 1.22563E-101 score: 301.417
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 95..124 score: 9.857374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16282.T1	Cucsat.G16282.T1	mRNA
Cucsat.G16282.T2	Cucsat.G16282.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0010494	cytoplasmic stress granule
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding