Cucsat.G16246 (gene) Cucumber (B10) v3
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCCCAACGTCATGAACTCTCTCAAGACTCCAAATGTCGCCAGCCTTTTCCTACCTTTCATTTCTCCTATTCAAATTTTCTCAATAAAGTTCTTCCAATTTTCCCTCCAAATTCTTCAAATCAATCCACATAATTTTGCATCCCTTTTCTTCAATCTTCCTGTCACAGGGTTAGTCATTCATGGTAGAAATCTACAGCTATGTGGTACAATTTTATTTATTTTTTCTCAAATGTCTAGTTAAATGCTAGAAGTGAGGGATTTATAATAGTTCTTGGAATTATCAGCTTCAATTAGAAGATTCATCTTCTCTAGTGGCTGCACATTTCTTTTAGTTCTTTCTTTTAGTTCTTTCAGATCCTTTGCTTTCCCAATCTATGTGGTTCATTTGTGTGAGGAGATTGAGAAATATGTTTGTGTTGATGAATCAAATAGTTATGCTCATAAGGTCTTTGATGATATGTCTCAAGAGTTAAAAAAAACATTTTTTTTGCCTTATATTTGTTTTGCATTATATATGTATGTGTATGTGTTTTTGTTTTGTTTAGGGTATTATTGTTTAGCCATAGAAAGAATTCAATACGATGAGTATGACTTATAGGGTGTGTATAAGTTGTGTTTTGTTTTGTAATTGTAATACAAAGGTAAAAGATGAGATTGAATTTAAACTGTTTGTTGAAATGTATTTACTTTATTTCTTCGATGACCTTTCAAACAAAACTCAAATTTTGGGTCATTAAAACTCAAACTTTCTAGTAGTGTGTAGTACTATTGATATAATGTGTTAATAATAAATATGAGTATGACTTATAGGACATGCACCTTTACATGCATGGATGCACACAGTAAATTTTGCATACTTTTGATGCCATGAGAAAATATATATGTAACTGCTCTTTAATTTCTTATTGGTTAGAATGTTGGTTCCTATTTAATTTCTTATTGATTAGAATGTTGGTTCCTGTTGAAAACATATAGGTCTAACATTTGAAAGATTGGAGTAGTGATTTTTAGAAAAGAGATTTATGTATAGAGTTGAGGATGAACAAGTATAGTGATTTTTCTTTTTTTTAAGAAATTAGAAAGATAAGAGAATTGGAGAAATGAGCTTCATGCATCCATGTGGAGTTTGATATTTCTGACACTGAACTGATGTAAATTATCTTGGTTGATAATTTCTAGCCTTGAACTCACATATGAATGGAAATTTTAAATCATTTTTATTATATAAATTCAAACGTATTCGGAGAAGAAGAAATTGGGATTTTGAGAATAAAGTTGCAAAGTTTCACCAATCCAAGGTAATTCCATGGAACCAGGAGAGAGTTTAGGAGAATTTTGGGATTTAGGGTTTTCATTTATTGTTCTTTTAAGAAATGAAATGGAAAAGAAAGTGAAAAGAAAAAAGGAATATTGTTATGCAAAGAGGAACAGAGAGAGCTTCCATTAAGAAAAATGCAGCAACTTCTCTGTTTCTCTTTTCAGAATTTGTGGTTTTTGAGGAAGAAAAAGAAGAAGTAATAATAATAATGAAAGGGTTTTTGAATTCTATTTTATTGTTATCTAGTAAAAGAAATAAAAAATACTGCTTGTTGTAATGACAAACAATTAAGTACAAGAAAGAATGTGGATCTTGGTCTGCATATATGATCTTTTTTTATTATTTTGCAAATTGAAATTGTATTTGTAATGGTGTAGGAAGTTGAGCCTCATGAGATTTACAATTTTGTGTTGAGAGTTTTAATCCTTCTAGTTTTACTTAATTTTGTGGCACATACTTCTTAGACTTCTTATATGACTGATTAAGAAGAGTATCTCTAGACATTATGTTGTGTTTTTTTATTCTAAAATTGATGGTTACGATTGCAGGAGGTTTTCATACAGTCATTTGGCTCCATTGAAGTTTATTTTACCTAAAGCAATTATGCTTAAGAAAGTTGTGGTCTTTGATGTGAAACTAGATCTTCATATTTCTTTCAATTTTGGCGTCCTAGTAGAAAGTAAGGAGGGTAAGTATATGTAATTAGAATTTGCCCAACGTCATGAACTCTCTCAAGACTCCAAATGTCGCCAGCCTTTTCCTACCTTTCATTTCTCCTATTCAAATTTTCTCAATAAAGTTCTTCCAATTTTCCCTCCAAATTCTTCAAATCAATCCACATAATTTTGCATCCCTTTTCTTCAATCTTCCTGTCACAGGGAGGTTTTCATACAGTCATTTGGCTCCATTGAAGTTTATTTTACCTAAAGCAATTATGCTTAAGAAAGTTGTGGTCTTTGATGTGAAACTAGATCTTCATATTTCTTTCAATTTTGGCGTCCTAGTAGAAAGTAAGGAGGGTAAGTATATGTAA PNVMNSLKTPNVASLFLPFISPIQIFSIKFFQFSLQILQINPHNFASLFFNLPVTGRFSYSHLAPLKFILPKAIMLKKVVVFDVKLDLHISFNFGVLVESKEGKYM Homology
BLAST of Cucsat.G16246 vs. NCBI nr
Match: XP_004151978.3 (CDT1-like protein a, chloroplastic [Cucumis sativus] >KAE8650673.1 hypothetical protein Csa_009499 [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 1.53e-12 Identity = 47/70 (67.14%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Cucsat.G16246 vs. NCBI nr
Match: XP_031737520.1 (CDT1-like protein a, chloroplastic [Cucumis sativus] >KGN57983.2 hypothetical protein Csa_010006 [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 1.53e-12 Identity = 47/70 (67.14%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Cucsat.G16246 vs. NCBI nr
Match: XP_008447443.1 (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo] >KAA0038091.1 CDT1-like protein a [Cucumis melo var. makuwa] >TYK20516.1 CDT1-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 6.39e-11 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Cucsat.G16246 vs. NCBI nr
Match: XP_038887484.1 (CDT1-like protein b [Benincasa hispida]) HSP 1 Score: 66.2 bits (160), Expect = 5.66e-10 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Cucsat.G16246 vs. NCBI nr
Match: XP_031739146.1 (CDT1-like protein a, chloroplastic [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 1.87e-09 Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of Cucsat.G16246 vs. ExPASy TrEMBL
Match: A0A0A0L7I7 (CDT1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G394670 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.22e-11 Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Cucsat.G16246 vs. ExPASy TrEMBL
Match: A0A5A7T8X4 (CDT1-like protein a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00930 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.10e-11 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Cucsat.G16246 vs. ExPASy TrEMBL
Match: A0A1S3BGW9 (CDT1-like protein a, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489888 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.10e-11 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Cucsat.G16246 vs. ExPASy TrEMBL
Match: A0A5D3BZJ0 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00950 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.77e-09 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of Cucsat.G16246 vs. ExPASy TrEMBL
Match: A0A1S3CEP6 (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103500097 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.77e-09 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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