Cucsat.G16198 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16198
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg2231: 913878 .. 916003 (-)
RNA-Seq Expression	Cucsat.G16198
Synteny	Cucsat.G16198

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCTCTCTTTGAAACTACTCCTTTTCATGCACTTTTTTTCTCTTTATCTTTCCTCTTTTTTTCCCCCTTCTTCAAAACCAAAAGGATTTTCTGTCATATTTTTCCATTCTCTTTCTCTCACTCACATTTCTTCTTTGTTAAGTTGTTGTTGTTGTCTAGTAGAGAGGAAATAAAATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGTAACAACTCTCTTTAATTACCTCTCTTTCATTTATTATTTCTTTCTTTGAAATATTATTTAATGGGGTTGGTATACAACGTACGTGGTGGACAGTTTTAACTGTTTGCAACAATCTTAGATCGTTATAGAATGATCTCATTGAATATATATATATATATACTATAGAAATGAGTTTTCTTTTTTCCTTTTTCTTCTTGTCCACTCATGACGTGATAAGAGATATGTTTTAATTCACCTGTTAGTTGATGTATATGTGTGCATGGATTGCTGTTTATGTTTAAAACATTGATCTGGTTTTAGAACTTTTAACAACTTGCATTTATTTATTTTCTATTCATAAAATACTTCGTATTGTAATTGTGAACTTCTCTAACTCATCTAATTAGATTTTTTTTTTTTTTTTTGAAAAGGTAATTAGATGTTAATTTTGTTTGTTAAGAAGTTGCATGCAACATAATTGGATTATTTAGTCTTCTTGGTAATCAATTTCATTTAACTTATTTCTTCTCAATTTCAATTCAAAACAACAAAAACAAATTTTTAAAAACTACATTATTAAACTTTCAGAATTAGATTAGTTTTTGAAAATATTTGTAAAAATTTAATAACAAAAGCAAGAAATTTGGAGATGGAGTAAGTGTATATGGGTTTAATCTTCAAAATTGAAAACCCTAAAAATAAAATCGTGCGGTTATTTTTTCTTTCCAATTTAGGAATTCAAATACGTAAAACTATACAAAAGAAATAAAAGAAAAATTAAAGCTTAGTGAATTATATAACTACATGATTGAATGTTTAGAAATCAAATTTATAAAACCCTAGTTATTAAGGCTCACTTGGATAACAGATTCATTTTTAGTTTTCTTTAAAACTTTTGTTTGTCTAATCACTATTAGAATAATATGATGTTCACCTTTCTTAAAAGTAAGATTTGAATTCCTATTCAAATTCCAAAAGTAAAACAATGTTTAAGAAACGGAAAGAAACAGTTTTAAAATGTTGATTTTTTTTTGTTAATTTATCAAAAACTCAAATGCTTTAGAATTTCAGTCCCAAACAAAATTCAAATATTATTGGCTCAGTCTTTGTCCCAATCTGCTTACGTTTTTTTTTTTCTTTTATTGGGAAATGATTGTGATACGTTTGAAATTGAGGACAGGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCAGCCGATCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAGTTGGATAAATTTGAGTCATAGCTTCACAGTCGTCACACACAAAGTTAAAGCAGCACACAGGTTTATATGGTTCAAAGTATGGGGGCGTGGAAGATTGTTGAGATGCAAATATTTTTTTGTTCAATATAATGTTTAGTTTTAAATATATAATTAAGTGTTGAGATATATTGGTGTGAATTAGAAGAAATATGTTGTTTAAAATCCTGTTTTTATATATTAAATTATATAAATTTTGTATTTTGGTAAAGTTAAAGTTATGGCCTCTTGTGGACTCCAATTGTGTTAAAGTAATGTATGGGGTATGGTATGAAAGAAAAAGTAAATTTGGTTAGAGGGAAGTGTTGAATGGGACTTTGGAGACATTGGAGAGTCAAATAAATAATGCTGACCCGGAAACAATATCGATAAAGGCCATAGGGCATTAATTACCTATGCATCCCTTTTCAAAATACAAAGAAAGAA

Coding sequence (CDS)

ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCAGCCGATCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAGTTGGATAAATTTGAGTCATAG

Protein sequence

MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPQPITPNFTIFQMLQQLDKFES

Homology

[Close]

BLAST of Cucsat.G16198 vs. NCBI nr
Match: XP_004140415.1 (uncharacterized protein LOC101204044 [Cucumis sativus] >KGN50779.1 hypothetical protein Csa_004700 [Cucumis sativus])

HSP 1 Score: 233 bits (595), Expect = 2.31e-77
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPQPITPNFTIFQMLQQLDKFES 115
           VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSP+PITPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Cucsat.G16198 vs. NCBI nr
Match: XP_008456876.1 (PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 uncharacterized protein E6C27_scaffold452G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (572), Expect = 7.45e-74
Identity = 107/115 (93.04%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPQPITPNFTIFQMLQQLDKFES 115
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSP+P TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Cucsat.G16198 vs. NCBI nr
Match: XP_022942644.1 (uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 uncharacterized protein LOC111482932 [Cucurbita maxima] >KAG6599867.1 hypothetical protein SDJN03_05100, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (460), Expect = 2.00e-56
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSPQPITP---NFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP P+ P   NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

[Close]

BLAST of Cucsat.G16198 vs. NCBI nr
Match: KAG7030551.1 (hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181 bits (460), Expect = 6.92e-56
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 61  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 120

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSPQPITP---NFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP P+ P   NFTIFQMLQQLDKFES
Sbjct: 121 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 179

[Close]

BLAST of Cucsat.G16198 vs. NCBI nr
Match: XP_023551192.1 (uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179 bits (455), Expect = 1.15e-55
Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKR E
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRAE 81

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSPQPITP---NFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP P+ P   NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

[Close]

BLAST of Cucsat.G16198 vs. ExPASy TrEMBL
Match: A0A0A0KPE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G258200 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.12e-77
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPQPITPNFTIFQMLQQLDKFES 115
           VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSP+PITPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Cucsat.G16198 vs. ExPASy TrEMBL
Match: A0A5A7SM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00230 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 3.61e-74
Identity = 107/115 (93.04%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPQPITPNFTIFQMLQQLDKFES 115
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSP+P TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Cucsat.G16198 vs. ExPASy TrEMBL
Match: A0A1S3C3T8 (uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 3.61e-74
Identity = 107/115 (93.04%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPQPITPNFTIFQMLQQLDKFES 115
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSP+P TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Cucsat.G16198 vs. ExPASy TrEMBL
Match: A0A6J1J9G4 (uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 9.66e-57
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSPQPITP---NFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP P+ P   NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

[Close]

BLAST of Cucsat.G16198 vs. ExPASy TrEMBL
Match: A0A6J1FRX2 (uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC111447618 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 9.66e-57
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSPQPITP---NFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP P+ P   NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

The following BLAST results are available for this feature:

BLAST of Cucsat.G16198 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G16198 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140415.1	2.31e-77	98.26	uncharacterized protein LOC101204044 [Cucumis sativus] >KGN50779.1 hypothetical ...	[more]
XP_008456876.1	7.45e-74	93.04	PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 unc...	[more]
XP_022942644.1	2.00e-56	78.33	uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 unchar...	[more]
KAG7030551.1	6.92e-56	78.33	hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023551192.1	1.15e-55	77.50	uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G16198 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPE8	1.12e-77	98.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G258200 PE=4 SV=1	[more]
A0A5A7SM67	3.61e-74	93.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C3T8	3.61e-74	93.04	uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=...	[more]
A0A6J1J9G4	9.66e-57	78.33	uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932...	[more]
A0A6J1FRX2	9.66e-57	78.33	uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..94
None	No IPR available	PANTHER	PTHR34196	OS02G0697700 PROTEIN	coord: 6..115
None	No IPR available	PANTHER	PTHR34196:SF4	BNAC09G20880D PROTEIN	coord: 6..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16198.T1	Cucsat.G16198.T1	mRNA