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Cucsat.G16111 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAATGCAACAAAGAGAAAGGGGAAAAAAAAAGTGTTTTTTAGAGAGAGAAAGAGAAGAACTTGAATTTTGTACATCTTTCTATCTCTCTCTATCCAGAAAAGCCACAAGAGAGAAAGAAGAAAATCCACAGACCCTTAAGCAGTGCAGTAAAAAGCTTCTCTTTTTCTCTATCTTTCTTTCTGTTTGTTATTATTGTTTTTTTTTTTCTTTTGGGGTGTTTATTTCCAAGGTTTTTGGATCTCTCCAAGATTAGGATTTTGGAGTACCCCTTTTGGGTAATATTATTTGGAGTGCAGAGGGATTTAGGTAGGGATATAAATGGGAAGAGGGAAGATAGTCATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTGACCTTTTCAAAGAGGAGAAGTGGTTTATTGAAAAAGGCTAGAGAACTTTCAATCCTCTGCGATGCTGAAGTTGGTTTGATCATTTTTTCAAGCACTGGCAAACTCTATGATTATTCCAGTTCCAGGTCAGATCTCTTTCTCTCTCTCTATAATTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATCTTTTCATAATTTTATCAACTGGGTTTTCTTTCTTTTTTTGTTTTTTTTTCATACTATTATGATTTTCCATCCCAATATTATTGGATCGAATAATTAAGGTTAAAAGAAATCAAACGATTGTAATTAACAATCAGAGGTGAAACATATGTATGTATATGTCTGTATATATGTGGTAATATATATCTTATTATTCAATATAATAATAACTTTTATAATTAGTACAGCTTCATGCTTGTTGATGTATTATTTGAATCTTCTTCTAAAAAATATAATTAAAATATCGTATGGGTGTGATAAATTATTGATGAGTTTGTTCTGCAAATGTATGAGATTGTTCGTTTAATTAAGAGAGGAAGAAATAGGAGATTCTTTTTGGTGTTTTCAAGTCATGGGGGAAAATTTTCAAATATTATGGATTATTTCTGCATGTTATTTTTAAATTTTAATTTTTGCTTATTATTATCATTTTGCATGGGCATCTTTGATAATATTATGGATCCATTTTATCTTATGCTGTACTGTAGTTAAAATTTCTTATTGGTTTTTTTTTTTCTTTTTTATTTATAGAAAAAGTAAAATTATTATTGTTATTATTCTTAATTCTCTCTCTTTAGATCTTTTAAATTTGTACCTTTCTGAAACTTCCGAGGAAGTGAGTGGTGGATGATTGATTCTCTTTAAAACTAAGAACATGCATTCGCCTTTCTCTTTCTTTTATATTCATTCATTTTCTTTTCGCCCCTTCAAATTTATAAGTGTGTCTGCTTTTTTTAATGTATATATATATACATACATATAGGCTGAATGTTTTGTTGACATCTTTTCATTTTTTAGCTTTTTGAAACATTGCTAATTGATGTTTCATATTTAATTTCAATTGTACATCTTGATCTCACTTTATGAGAATTATTATGAATGTGATTCTAGATTATTATATATATATATATATATATATATATATATATATATATATATATTCTTTTTTCTTCCTACCATCTCTACTGTTTTTGTTTTTGTTATTAGGGTATATATGTGTGTGTATGTATTATTATTATAAAAAAAGATAGGGTATATGTTTGCAGCTTTCTCATGTTTCCCTTTCTATATGTATATGGATTTTCCAATATATTCCTTCTTTTATTCTCTATTTATTTTCTCATAATCCTTTTCTAAAGTTCTCCAAAATATATATACTACATTTTTCTTGTCAACTTTGATAGTGTTTTAACCTATTAGGAGTATTTTCTTCTCAGTTATACATTGTTTGCCATAGTAAACACGTGCACATTCTTTATTACCTTCCCACTTGGTTTTAGTTTCTCCATTTTTGCATTATTTGGTTGCTGTGTGTTTCTATTTCAACTTTTTTTCTGATTGGTTTTTCTTTTGATATAAATATGCGTTGAGTGAAAGAATCTAACCTATAATTTTGAAGTTTATAAACCATTATTTTATGCGTTAATGAAATAAAAAAGCTTTGGAGAATCTCTAACCAAAGTTTGGCAATGAGATATAAATGTAGGTTGAGTGAGAGAGTAGAAATATGTATTACACATTTTTTTTTAGTTCTAACAAAATATGAGAGTTGAAAAGTGTAACATATGTGGTTTAGATGATCACATTTGTAATATCATTTAGATTATGTAAGTTTATAATATAATTTTATTTATGTTTAGTACAAGAGTAAGTAAGTATGAAATTAAATTTAATATAATATAATTTAACAAATTCCAAACAAATAAATAAATATATACAAGCTAAAACTTATACCCACGAGTCTTAATTTTTACTTCAATATTATTAAGAATAACAAAATTAAAAATCAGTTGGAAAAAGGTTATTTACAAATTAAAGAAAACTCATATGGATGCTTATTCATGTGTGTTCTTTAACAATGAGTTTTCCAATTATATATTTAGAATTATAAGACTATTTCACAGTTTATCTTTTGCATACTATTTACTTTGCTTTTAAAATTAGATATATTGGCAAAAGTTAAAAGAAATATTTTCAAATATAACAAAATAAAACAAAATATCACTCTATCTAAGATCGACCGTAGATAAAGTTTGTCTACATTACGATAGACAAAAAATAAATAGTAGTCTATTTTGGTCAATTGTAGTATATCACATCACATATTGGTCATCATATTTTGTTATATGGGTAAATAATTTTGGAAAAATTTTCAATTAAAATCTTTTTTTAGAAAGGTGACTTTAACATGTTAATTTTTGTTATATGAAATTGAAGATTTTTATCCCTATTATAAATAGAAATTTTTGTTAATTTTATATGGGACTTTGATATAAATATATTTTCTAGTTACTCTTGTAGCTTCAAATATGTATACTTTTCGCATTTAACAATAAACAGAGAATATGATATATATATATATATATATATATATATATATATATATATATAAATTAAGATCATAAAATATAATTGAATAATTAATACCCCCTTAAGAAAACTACTTTGGAAAGTTTCTACTCTTCCTCAACATCTAGTAAGTATAGAGGAAGGATGAAGAGTGAAATTCCTCTTATGAAAAAGAGTAAGAAATAAATTTAGATTCACATCAGTTGTGATTTGGTACGTTTACGTGAACAATTATATATATAATCCAAGAGAATTATTACATAGTTTAAAGAAATAATTGTTTTAGTTCTTCAACTTACATTTGTTTAACTCTATTTATTCAAGGATGAGATTAGTGATAATAGAGAGTTTTAATGACTGGACAGCTTTTAATTTTGATAAAATAAATTTTCTTAAAAAACACTGATAACATATCCACTTAAATTTTGTTTGGATAAAAAGTTGGAAATGCACTCTACCCCTTATTATAATCCAAAAGAATAATTAAAATGGAACTCTTTTAGAAAATGTCATTACAATTATAGTAAAGTGAGAAAATTTAAATGACAAATAGAGAGAAGCTTATCTAATACTTTGTTTATCAATGTAGGTTTAAGTTGTAAGACATGGCAACTAAGGCAGAGACTAGACAAGTTGTACTTTAATGTTCAATATATTTTTTTCAAACAAGAAGTAAAAAGTTTAATGAGATCAAAGGATTAAAGTGGTGTTCTAACCAAATTATATACATCACTTCTTATTTATACATAGAAACAATTTCGATGGTAATTTAGGAACCTAACAATTGTTTTAATATTGGAAAAGACCTTGCAAGACTATAGTGTTTGACCACCAAAACACTTTGACAATTAAGTCATTATTAACAATTTAGAGAGATAGAGAGTATAGAATTCAGTCCTTTTGATTATATAGTGAAATGGTTCTAGGATGGTCACTCTTGACTAATTAATCTTCTAGTTAATTAATTTAATAAATACTTAGTCTAGTTATTACAAATGGATCCAAGCAAAGGTGGTTGGTATATTTGATAAACACTCGTCACACGTCACACTCATCCATCAAGAGAAATCATAGTGTTAAGGTCCATTATTTTTCTCATGGTCAAACAAGGTTCCTGAAGTTTATGAAATCAACCTCTATCGCCTTCTTAGTTAACTCCTATACCAATCGTCTTCCTAACTCTTATGGACAACCAAGCGGATCTTTTGACTAGAGTTGATCTCTTCAGAGTATATGGTTCTTAGTCAAATAAAGCTACTCACAATAATGATCCATGGATCAGTCCTTATAACTACTGATTAATTGTTGTATATAGGTTTGAGGCATTATACTACTAGCCGCGTTGTAGTAGCCTATTGAATACTTCGAAGCAATCACAAGAAAAACGTAAAAATGTGATAGCCTCAACTAACAATACACGAGAAAGTTACAAAAAGGAAACCAAAGAAAAACATCAACCTCGATCCTTCACCGATGACCTATAAAAGCTTGAGAACTTCCTATGGTTTGTTGCCAACCAATTAGTTGCCACAGCAGCAGAAAATAGGAGCTGTACAAGGTCCAAAATGACCTTTAACTTGAAACAGCGAATCCACCCTAACTTCATAGCCAAAGATCCTCAACCACAGAGAGATACCAAACGTTTGCTAGAAACAAGACCACGGTTGGTAACTTACTTCCTTCCAAGCACACCTGCATAAAACAACAGAAATATGTTAGGTTAAAACTTTTTATTGTTCTTTGTATTTTTAATCTTAAAGACATAATAACTCGTATGAACTTTTTTACTTGAGATTCAAACCATAAACATTTACTCTATAATGTCGTTTGTATTCTAATAATAATCTTCTTACATGAGGAACTGTTATATGGAACATATGCATTCTCCAGCTAGATGCAATGCAACCATATATCTCGAAGAAAAATCGAGGACCATTGTAACTCACCGATAACTTCTAGCCAGTTCTACCTTTATTTTTGGAAAAGAATATGTCATATGATGCTTCATCGAAATAAGATCATGGATAGAACTTATAGCAAAACCATGTGATAAGAACAATGGTTGTGGTTCGAGATCAAGGAATTGAAAACGTGGTTTGAGAAGGAAAGATGGAAATTGGGAATGAAATGTTTGTAGAGCAAAACATATTGATGGAAAACAAGTGTTCGATTTTTTGTATATTCACGTGTACTCAAGCTAGTTTCCACACAATTCTAACTCTTCTTACAACACAATCACTTACGATATGTCCTAGTAAGATATAAATCCTAAATAGAAGGTTACACAATCACTTACGATATGTCCTAGTAAGATATAAATCCTAAATAGAAGGTTACCATAACTTAAACTCATTCCTGAAGTCCACTCTTTGCATGAGCCTTCATAGACCATAAGACCCTTAGGTTATTTCCCCATGTCATTCTAAACGACATTGTAATCAGAATTATCACAGCCTCCTTCTAGCAAGAAGACAGATCAAAACCATTCTCACAAAATAGTAAATTGTGAAAAAATTGCACTGATCCATGTTTCATAATTTCTATTAGAAGCCGTGTTTAACTTTTTTTTAATCTCAAGGTGCAATAAAGCACAAGTCTTTTGGAGCTTAAGCACATACTTTGTTTTTTTTGTGACACACTAAATAAAAAACTACATAGTTGAAGTAGAAACATGAAAAACAAGATCACGTACCTTTGATTTTTTGTTTAATAAACGAAAAATCCAAATTATTGCTATTTTTTAAAAAAGAAAACAATGAACAAGCCCCAAGGCTCAAGGGGTTTCACAAAAGGCACATGCCTTATTTTGTGAGCCTCCCCTTGAACCAGGCCTGCACCTTGAGCCTAGTTTGCACCCTAGATGACTAATGCAAGAAGGGGATAGAAAGATATCCTCGGTAGAATTTGAGATATTTGTTCCAATGTGAAACATCATATGAAAACCGACGATAAAAGGAGTTTTGATGAATCTCAATGGAAACCACCGTAATCCAATGTGTTTGTACAAGGTAGGGAGACTGTCATTAGCATCTAACATAATTAGTGTTTATGATGTTTCGCGGTTATTCCATGGCAATTATGAATTTTAGATTTGATTTAGCGTGATTATGTACTGAATACCTATAGTTTCTATCTTATCAGCATAAGGTCGATTACCGATCGATACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAATTCTGTTTCAGAACTCCAGGTGATCTTTCATTGTTCATCTGCAAGTCTAATTTTTCTCATTAATTTAGATCCATTGACATAAACATCTACACGTTTGCTGTACTTTGAATGAAGCATTGACATTGAGAGAAGTCTCTAGTTTAAGAAAAGCCTAAATACGATGTTCAATCTAGATAGGGAGTCTCTAGTTTAGGGAAAGCCTAAACCTTTCATTGGGAGTAAAGTTTGTTGTGACTTGCAAGTCTTGATAGTGTGTACTATCAAATAAGTTCTTTTGTAATCATTTAACTCCATTAGTAAAGTACTTTTTATCAGACTCTCTGCCCCTGACGTAGGTGTGTTATTTTTGTTGTATGGATATTTTTTATTGTCTTGTTTTATATCATGTCAGTGACATCGGCCTGTGGATCATCCAGGCAAATTCTTTTTCTT ATGGGAAGAGGGAAGATAGTCATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTGACCTTTTCAAAGAGGAGAAGTGGTTTATTGAAAAAGGCTAGAGAACTTTCAATCCTCTGCGATGCTGAAGTTGGTTTGATCATTTTTTCAAGCACTGGCAAACTCTATGATTATTCCAGTTCCAGCATAAGGTCGATTACCGATCGATACAACAAGATGAAAGAGGAGCAAAATCAGCTGATGAATTCTGTTTCAGAACTCCAGGTGATCTTTCATTGTTCATCTGCAAGTCTAATTTTTCTCATTAATTTAGATCCATTGACATAA MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSSIRSITDRYNKMKEEQNQLMNSVSELQVIFHCSSASLIFLINLDPLT Homology
BLAST of Cucsat.G16111 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-20 Identity = 54/115 (46.96%), Postives = 81/115 (70.43%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy Swiss-Prot
Match: Q9SI38 (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.4e-17 Identity = 58/124 (46.77%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy Swiss-Prot
Match: Q38840 (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=1 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 9.7e-17 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy Swiss-Prot
Match: A2RVQ5 (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 6.3e-16 Identity = 54/128 (42.19%), Postives = 82/128 (64.06%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.6e-14 Identity = 46/116 (39.66%), Postives = 77/116 (66.38%), Query Frame = 0
BLAST of Cucsat.G16111 vs. NCBI nr
Match: XP_008454453.1 (PREDICTED: MADS-box transcription factor 23 isoform X2 [Cucumis melo]) HSP 1 Score: 231 bits (589), Expect = 2.16e-74 Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of Cucsat.G16111 vs. NCBI nr
Match: XP_031740009.1 (MADS-box transcription factor 23 isoform X2 [Cucumis sativus]) HSP 1 Score: 228 bits (580), Expect = 3.89e-73 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cucsat.G16111 vs. NCBI nr
Match: XP_008454452.1 (PREDICTED: MADS-box transcription factor 23 isoform X1 [Cucumis melo]) HSP 1 Score: 226 bits (576), Expect = 2.18e-72 Identity = 122/133 (91.73%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of Cucsat.G16111 vs. NCBI nr
Match: XP_011653447.1 (MADS-box transcription factor 23 isoform X1 [Cucumis sativus] >KGN53991.2 hypothetical protein Csa_011815 [Cucumis sativus]) HSP 1 Score: 223 bits (567), Expect = 3.93e-71 Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Cucsat.G16111 vs. NCBI nr
Match: XP_038905561.1 (MADS-box transcription factor 23-like isoform X1 [Benincasa hispida]) HSP 1 Score: 216 bits (549), Expect = 3.02e-68 Identity = 118/134 (88.06%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy TrEMBL
Match: A0A1S3BYR5 (MADS-box transcription factor 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494854 PE=4 SV=1) HSP 1 Score: 231 bits (589), Expect = 1.05e-74 Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy TrEMBL
Match: A0A0A0KZU2 (K-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G181200 PE=4 SV=1) HSP 1 Score: 228 bits (580), Expect = 7.58e-74 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy TrEMBL
Match: A0A1S3BY64 (MADS-box transcription factor 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494854 PE=4 SV=1) HSP 1 Score: 226 bits (576), Expect = 1.05e-72 Identity = 122/133 (91.73%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy TrEMBL
Match: A0A6J1JVH1 (MADS-box transcription factor 23-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487792 PE=4 SV=1) HSP 1 Score: 212 bits (540), Expect = 3.00e-67 Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of Cucsat.G16111 vs. ExPASy TrEMBL
Match: A0A1S3BYM8 (MADS-box transcription factor 23 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494854 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 2.42e-65 Identity = 114/126 (90.48%), Postives = 117/126 (92.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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