Cucsat.G16067 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16067
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Patatin
Location	ctg2178: 455025 .. 456140 (+)
RNA-Seq Expression	Cucsat.G16067
Synteny	Cucsat.G16067

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTTTGGATCTGGAGATAAAATATTTGGAGCATGTGAAACATAACAAATAAAAGAAAATTAGTTCAGAGTTTTTTTTGGTTATAAAAGACTCTTCTTTGGGGACACATAATCCCAGACAACTCAAATTGCAAAAGCAACATAGTATTCTCTTTTTCTCTCCTTCCTCATAGACCCATCCTTTCGATTTACACATAAACAGTATGGCAGATAAATTAGCTACATTTGAGAAGGGAAAGAAGATAACAATTTTAAGTATAGATGGTGGTGGCATTAGAGGCATCATTCCCGGAACTATTCTAGCTTTTCTCGAGTCTAAACTTCAGGTAATAATAATATATATACTTATATAGTTTATTATTTTTCTTTCAAAACTAAAGGTTGACTTGAAAGTATCACTCGTCTATACTAAAACTCTTTACGAATTTGTAAGAAATGTTTTGGTTTTTATTGATTGGACGAACGATTTGGTTAGGAATTGGATGGAGAAGATGCAAGAATAGCAGATTACTTTGATGTAATTGCTGGTACAAGCACAGGTGGTTTGGTTACTTCCATGCTTACAGCTCCTAACGAGAATAATCGACCTTTGTACGCTGCAAAAGATTTAACCCGCTTCTACATCGAACATGGACCAAAAATCTTCCCTCAACGAAAGTCAGTAGTTTTCTTTTCTCTTTTCAATTTGCAAAAGCTTTCCTTGATAAGAAAAGAGATATGTAGTTATTATAATCTCGTCGTTTTCGTTTGCTGATATTGATGTTTTTGTGTGAAAGCAGTTATTTCTTAAGTTCAGTGGTGAATATGTTTGGAAAAGTTATGGGCCCAAAGTACGATGGCAAATACTTGAGATCATTGATAAACAGATTGCTTGGAGATATAACACTTAAGGAAACACTAACGCAAGTCATTATTCCTGCTTTTGACATTAAGCTTCTTCAACCTGTGATTTTCAGCACACTCGATGTATGAAAATTTAATTAAAAACGATTTGATAAACAGTTTATATTCCTTTAATTTTTTTCAATAATTAATAAATTGGAGGAATTAATTATTCAGGCAAAATGGGATGCGTTAAAGAATCCAAAACTGGCTGATGTTTGTATCAGTACCT

Coding sequence (CDS)

ATGGCAGATAAATTAGCTACATTTGAGAAGGGAAAGAAGATAACAATTTTAAGTATAGATGGTGGTGGCATTAGAGGCATCATTCCCGGAACTATTCTAGCTTTTCTCGAGTCTAAACTTCAGGAATTGGATGGAGAAGATGCAAGAATAGCAGATTACTTTGATGTAATTGCTGGTACAAGCACAGGTGGTTTGGTTACTTCCATGCTTACAGCTCCTAACGAGAATAATCGACCTTTGTACGCTGCAAAAGATTTAACCCGCTTCTACATCGAACATGGACCAAAAATCTTCCCTCAACGAAATTATTTCTTAAGTTCAGTGGTGAATATGTTTGGAAAAGTTATGGGCCCAAAGTACGATGGCAAATACTTGAGATCATTGATAAACAGATTGCTTGGAGATATAACACTTAAGGAAACACTAACGCAAGTCATTATTCCTGCTTTTGACATTAAGCTTCTTCAACCTGTGATTTTCAGCACACTCGATGCAAAATGGGATGCGTTAAAGAATCCAAAACTGGCTGATGTTTGTATCAGTACC

Protein sequence

MADKLATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST

Homology

[Close]

BLAST of Cucsat.G16067 vs. ExPASy Swiss-Prot
Match: A2YW91 (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.2e-62
Identity = 114/174 (65.52%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 9   EKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGLVTS 68
           EK K +T+LSIDGGG+RGIIP TILAFLE +LQ+LDG DARIADYFDV+AGTSTGGL+T+
Sbjct: 16  EKVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTA 75

Query: 69  MLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSL 128
           MLTAPNENNRPL+AA +L +FYIEH P IFPQ+N+ LS +      V GPKYDGKYL SL
Sbjct: 76  MLTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSL 135

Query: 129 INRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 183
           +   LGD  L + LT V+IP FDI  LQP IFS  + K+  LKN  L+D+ IST
Sbjct: 136 LREKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISIST 189

[Close]

BLAST of Cucsat.G16067 vs. ExPASy Swiss-Prot
Match: Q6ZJD3 (Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.2e-62
Identity = 114/174 (65.52%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 9   EKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGLVTS 68
           EK K +T+LSIDGGG+RGIIP TILAFLE +LQ+LDG DARIADYFDV+AGTSTGGL+T+
Sbjct: 16  EKVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTA 75

Query: 69  MLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSL 128
           MLTAPNENNRPL+AA +L +FYIEH P IFPQ+N+ LS +      V GPKYDGKYL SL
Sbjct: 76  MLTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSL 135

Query: 129 INRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 183
           +   LGD  L + LT V+IP FDI  LQP IFS  + K+  LKN  L+D+ IST
Sbjct: 136 LREKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISIST 189

[Close]

BLAST of Cucsat.G16067 vs. ExPASy Swiss-Prot
Match: B8AQW7 (Patatin-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=PLP1 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.9e-57
Identity = 101/172 (58.72%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 11  GKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGLVTSML 70
           G+++T+L+IDGGGIRG+IPGTILAFLE++LQELDG DAR+ADYFD IAGTSTGGL+T+ML
Sbjct: 14  GQRVTLLAIDGGGIRGLIPGTILAFLEARLQELDGPDARLADYFDCIAGTSTGGLITAML 73

Query: 71  TAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSLIN 130
            AP ++ RPL+AA D+ RFY+++GP+IFPQ+   +++ +     +  P+Y+GKYL+  I 
Sbjct: 74  AAPGDHGRPLFAASDINRFYLDNGPRIFPQKRCGMAAAM---AALTRPRYNGKYLQGKIR 133

Query: 131 RLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 183
           ++LG+  +++TLT V+IP FD++LLQP IFST DAK   LKN  L+D+CIST
Sbjct: 134 KMLGETRVRDTLTNVVIPTFDVRLLQPTIFSTYDAKSMPLKNALLSDICIST 182

[Close]

BLAST of Cucsat.G16067 vs. ExPASy Swiss-Prot
Match: Q84QY3 (Patatin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP1 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-56
Identity = 101/172 (58.72%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 11  GKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGLVTSML 70
           G+++T+L+IDGGGIRG+IPGTILAFLE++LQELDG DAR+ADYFD IAGTSTGGL+T+ML
Sbjct: 32  GQRVTLLAIDGGGIRGLIPGTILAFLEARLQELDGPDARLADYFDCIAGTSTGGLITAML 91

Query: 71  TAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSLIN 130
            AP ++ RPL+AA D+ RFY+++GP IFPQ+   +++ +     +  P+Y+GKYL+  I 
Sbjct: 92  AAPGDHGRPLFAASDINRFYLDNGPLIFPQKRCGMAAAM---AALTRPRYNGKYLQGKIR 151

Query: 131 RLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 183
           ++LG+  +++TLT V+IP FD++LLQP IFST DAK   LKN  L+D+CIST
Sbjct: 152 KMLGETRVRDTLTNVVIPTFDVRLLQPTIFSTYDAKSMPLKNALLSDICIST 200

[Close]

BLAST of Cucsat.G16067 vs. ExPASy Swiss-Prot
Match: O48723 (Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.1e-56
Identity = 107/172 (62.21%), Postives = 131/172 (76.16%), Query Frame = 0


Query: 11  GKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGLVTSML 70
           G  +TILSIDGGGIRG+IP  IL FLES+LQ+LDGE+AR+ADYFDVIAGTSTGGLVT+ML
Sbjct: 16  GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75

Query: 71  TAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSLIN 130
           TAPN+  RPL+AA ++  FY+E  PKIFPQ ++  S+   +   + GPKYDGKYL  LI+
Sbjct: 76  TAPNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQLIH 135

Query: 131 RLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 183
             LGD  L +TLT V+IP FDIK LQP IFS+ + K   LK+  LAD+ IST
Sbjct: 136 AKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAIST 187

[Close]

BLAST of Cucsat.G16067 vs. NCBI nr
Match: XP_031736911.1 (patatin-like protein 2 [Cucumis sativus] >KAE8651940.1 hypothetical protein Csa_006096 [Cucumis sativus])

HSP 1 Score: 361 bits (926), Expect = 1.82e-122
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MADKLATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGT 60
           MADKLATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGT
Sbjct: 1   MADKLATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGT 60

Query: 61  STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKY 120
           STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKY
Sbjct: 61  STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKY 120

Query: 121 DGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCI 180
           DGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCI
Sbjct: 121 DGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCI 180

Query: 181 ST 182
           ST
Sbjct: 181 ST 182

[Close]

BLAST of Cucsat.G16067 vs. NCBI nr
Match: XP_031736910.1 (patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 348 bits (893), Expect = 1.87e-117
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0


Query: 1   MADKLATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGT 60
           M DK A FEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDG DAR+ADYFDVIAGT
Sbjct: 1   MEDKFAKFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARVADYFDVIAGT 60

Query: 61  STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKY 120
           STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN+FLSS VNMFGKVMGPKY
Sbjct: 61  STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNHFLSSAVNMFGKVMGPKY 120

Query: 121 DGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCI 180
           DGKYLRSLINRLL DITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCI
Sbjct: 121 DGKYLRSLINRLLRDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCI 180

Query: 181 ST 182
           ST
Sbjct: 181 ST 182

[Close]

BLAST of Cucsat.G16067 vs. NCBI nr
Match: XP_008457873.1 (PREDICTED: patatin-like protein 2 isoform X2 [Cucumis melo] >KAA0045866.1 patatin-like protein 2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 341 bits (875), Expect = 9.13e-115
Identity = 169/177 (95.48%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A +EKG+KITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   AKYEKGEKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYL 125
           VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN+FLSS+VNMFGKVMGPKYDGKYL
Sbjct: 63  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNHFLSSMVNMFGKVMGPKYDGKYL 122

Query: 126 RSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 182
           RSLINRLLGDITLK+TLT+VIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST
Sbjct: 123 RSLINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 179

[Close]

BLAST of Cucsat.G16067 vs. NCBI nr
Match: XP_016902154.1 (PREDICTED: patatin-like protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 337 bits (863), Expect = 6.24e-113
Identity = 169/178 (94.94%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A +EKG+KITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   AKYEKGEKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN-YFLSSVVNMFGKVMGPKYDGKY 125
           VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN +FLSS+VNMFGKVMGPKYDGKY
Sbjct: 63  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNSHFLSSMVNMFGKVMGPKYDGKY 122

Query: 126 LRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 182
           LRSLINRLLGDITLK+TLT+VIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST
Sbjct: 123 LRSLINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 180

[Close]

BLAST of Cucsat.G16067 vs. NCBI nr
Match: KGN62127.2 (hypothetical protein Csa_006186 [Cucumis sativus])

HSP 1 Score: 333 bits (855), Expect = 2.20e-111
Identity = 173/204 (84.80%), Postives = 176/204 (86.27%), Query Frame = 0


Query: 1   MADKLATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGT 60
           M DK A FEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDG DAR+ADYFDVIAGT
Sbjct: 1   MEDKFAKFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARVADYFDVIAGT 60

Query: 61  STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQR------------------- 120
           STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQR                   
Sbjct: 61  STGGLVTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRKCAVILVLPFSFADIDVLW 120

Query: 121 ---NYFLSSVVNMFGKVMGPKYDGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPV 180
              ++FLSS VNMFGKVMGPKYDGKYLRSLINRLL DITLKETLTQVIIPAFDIKLLQPV
Sbjct: 121 CENSHFLSSAVNMFGKVMGPKYDGKYLRSLINRLLRDITLKETLTQVIIPAFDIKLLQPV 180

Query: 181 IFSTLDAKWDALKNPKLADVCIST 182
           IFSTLDAKWDALKNPKLADVCIST
Sbjct: 181 IFSTLDAKWDALKNPKLADVCIST 204

[Close]

BLAST of Cucsat.G16067 vs. ExPASy TrEMBL
Match: A0A5A7TUQ1 (Patatin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004010 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 4.42e-115
Identity = 169/177 (95.48%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A +EKG+KITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   AKYEKGEKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYL 125
           VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN+FLSS+VNMFGKVMGPKYDGKYL
Sbjct: 63  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNHFLSSMVNMFGKVMGPKYDGKYL 122

Query: 126 RSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 182
           RSLINRLLGDITLK+TLT+VIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST
Sbjct: 123 RSLINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 179

[Close]

BLAST of Cucsat.G16067 vs. ExPASy TrEMBL
Match: A0A1S3C761 (Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 4.42e-115
Identity = 169/177 (95.48%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A +EKG+KITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   AKYEKGEKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYL 125
           VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN+FLSS+VNMFGKVMGPKYDGKYL
Sbjct: 63  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNHFLSSMVNMFGKVMGPKYDGKYL 122

Query: 126 RSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 182
           RSLINRLLGDITLK+TLT+VIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST
Sbjct: 123 RSLINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 179

[Close]

BLAST of Cucsat.G16067 vs. ExPASy TrEMBL
Match: A0A1S4E1P9 (Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 3.02e-113
Identity = 169/178 (94.94%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A +EKG+KITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   AKYEKGEKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN-YFLSSVVNMFGKVMGPKYDGKY 125
           VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRN +FLSS+VNMFGKVMGPKYDGKY
Sbjct: 63  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNSHFLSSMVNMFGKVMGPKYDGKY 122

Query: 126 LRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 182
           LRSLINRLLGDITLK+TLT+VIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST
Sbjct: 123 LRSLINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 180

[Close]

BLAST of Cucsat.G16067 vs. ExPASy TrEMBL
Match: A0A5D3CQT4 (Patatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002490 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.46e-110
Identity = 168/191 (87.96%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A +EKG+KITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   AKYEKGEKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQR--------------NYFLSSVVNM 125
           VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQR              ++FLSS+VNM
Sbjct: 63  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRKLVVIFFSFQRIRSDHFLSSMVNM 122

Query: 126 FGKVMGPKYDGKYLRSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALK 182
           FGKVMGPKYDGKYLRSLINRLLGDITLK+TLT+VIIPAFDIKLLQPVIFSTLDAKWDALK
Sbjct: 123 FGKVMGPKYDGKYLRSLINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALK 182

[Close]

BLAST of Cucsat.G16067 vs. ExPASy TrEMBL
Match: A0A6J1I3W2 (Patatin OS=Cucurbita maxima OX=3661 GN=LOC111470341 PE=3 SV=1)

HSP 1 Score: 318 bits (816), Expect = 5.83e-107
Identity = 157/177 (88.70%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 6   ATFEKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGEDARIADYFDVIAGTSTGGL 65
           A F KGKKITILSIDGGGIRGIIPGTILAFLESKLQELDG DARIADYFDVIAGTSTGGL
Sbjct: 3   ADFRKGKKITILSIDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62

Query: 66  VTSMLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYL 125
           VTSMLTAP++NNRPLYAAKDLT FY EH PKIFPQRN+FLSS VN+FGKVMGPKYDGKYL
Sbjct: 63  VTSMLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSAVNLFGKVMGPKYDGKYL 122

Query: 126 RSLINRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCIST 182
           R LI  LLGDI LK+TLTQ+IIPAFDIKLLQPVIF+T+DAKWD LKNPKLADVCIST
Sbjct: 123 RELIKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCIST 179

The following BLAST results are available for this feature:

BLAST of Cucsat.G16067 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YW91	8.2e-62	65.52	Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1	[more]
Q6ZJD3	8.2e-62	65.52	Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=...	[more]
B8AQW7	7.9e-57	58.72	Patatin-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=PLP1 PE=3 SV=1	[more]
Q84QY3	2.3e-56	58.72	Patatin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP1 PE=3 SV=...	[more]
O48723	5.1e-56	62.21	Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1	[more]

BLAST of Cucsat.G16067 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736911.1	1.82e-122	99.45	patatin-like protein 2 [Cucumis sativus] >KAE8651940.1 hypothetical protein Csa_...	[more]
XP_031736910.1	1.87e-117	95.60	patatin-like protein 2 [Cucumis sativus]	[more]
XP_008457873.1	9.13e-115	95.48	PREDICTED: patatin-like protein 2 isoform X2 [Cucumis melo] >KAA0045866.1 patati...	[more]
XP_016902154.1	6.24e-113	94.94	PREDICTED: patatin-like protein 3 isoform X1 [Cucumis melo]	[more]
KGN62127.2	2.20e-111	84.80	hypothetical protein Csa_006186 [Cucumis sativus]	[more]

BLAST of Cucsat.G16067 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUQ1	4.42e-115	95.48	Patatin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004010 PE=3 ...	[more]
A0A1S3C761	4.42e-115	95.48	Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1	[more]
A0A1S4E1P9	3.02e-113	94.94	Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1	[more]
A0A5D3CQT4	2.46e-110	87.96	Patatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002490 PE=3 ...	[more]
A0A6J1I3W2	5.83e-107	88.70	Patatin OS=Cucurbita maxima OX=3661 GN=LOC111470341 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1090.10	Cytosolic phospholipase A2 catalytic domain	coord: 3..182 e-value: 6.4E-58 score: 198.7
None	No IPR available	PANTHER	PTHR32176	XYLOSE ISOMERASE	coord: 9..182
None	No IPR available	PANTHER	PTHR32176:SF72	PATATIN-LIKE PROTEIN 2	coord: 9..182
IPR002641	Patatin-like phospholipase domain	PFAM	PF01734	Patatin	coord: 17..148 e-value: 6.9E-13 score: 49.2
IPR002641	Patatin-like phospholipase domain	PROSITE	PS51635	PNPLA	coord: 17..182 score: 27.035999
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	SUPERFAMILY	52151	FabD/lysophospholipase-like	coord: 12..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16067.T1	Cucsat.G16067.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016298	lipase activity
molecular_function	GO:0022857	transmembrane transporter activity