Cucsat.G15959 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15959
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	B3 domain-containing transcription factor VRN1-like
Location	ctg2178: 371604 .. 373185 (-)
RNA-Seq Expression	Cucsat.G15959
Synteny	Cucsat.G15959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTCTTCATGAGTTTCAAATCATTTCTTTCACGACTTTGATCACTTAAAAACCATCCGTTTTGTTGTATTTCCAAATTCATACCATAGAAAAGAAACTCAAATTTTCCAAAAATCTTTCTCTAATGGCTAATCTCTTCCGTTCTCCAAATCCCCATTTCTTCAAGGTCATTCTCCACCAAACTCTAACCCAACAAAAGCTTGTAAGTAATCGATCAAACTAACTAAACAAATCAAATTCTCTAATTACTTAATTAAATCTATTAATTTCTTCTCAGGACCTTCCAAACAAGTTTGTCAAGAACAATGGCGGTTCTCTGTTATTCAACAAGGTCACTCTCTTCCTTCCCGACGGGGCAAACTGGAAAATCCAACTCAAGAAATTAGACGGAAAAATCTGTTTCCGGAGAGGCTGGCCGGAATTCGTCCAGTTTTATTCTGTTCAACCTGGACATTTCCTAGTGTTCCAGTTGAAAGGAATTTGTTGTTTTAATGTCCTCATTTTCGATACCTCCGCTACCGAAATCGATTATCCAATTCGTCGGTTACTGGATCTGATTCCGAAAAGCAGAAACGAAGATGAAGAGGAATCTATTCAGATACTGAATGAGATGGTTTTGAAGAAGAGGAGAATGGAGAAAGAGGAGGAAACGCCGCCGGCTTATCGTTCGTTGCGAGGACTGAAGAAGATGATGAGGAAGAATGCGAAGGTGAAGATCGCTAAGAATCGAGGAATCACTAGCGATGAAGATGAAGGAGACCTGGAAATGGACAACTCACGGAGACAGAGTAATCACAGAGGAATAGGTTTGTGCGCTTAATTTCTTTGGAACTTAATTTGAATTTCAGCAATCAGATCTAAAATTGGATGAATATAACAATACCTACCGATTTCAGTGTATAATGAGGGAGACGATGGCCGAGTCAGTCCGGAATCGATGAGACCGATGAATCCAAGGAAGACGCCACCGGCATTGACGGAGAATCAACTAGCAGTTAAAAAGAGAGCGAGCTGGTTCAAATCGAGGAGGAATAATCCTTCATTCATGGTGACAATGAGACCTTCCTATATCCAAACAGGAAACTATCTGGTAAGAACAAAAAAAACGTGGATTGAAAGAGTGAATTGAGAACAATTTTGATGAATTGATTGGCAGAGCTTACCGAGGAGATTTGGAGAGAAGTACATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGCGACGGGAGGTGTTGGAGAGTGTGGTGTGGAGTACGATGGGCGTTTACACGGCGGAGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGCGGTGGACAATGAGTTGAAGGAAGGCGATATTTGTGTGTTTGAATTGATGAAGAAAAACGGCTCCGTTTTGTTTAAAGTCGCCATTTTCCGTCTTCCAGATGCTGAATAAATAACTCCGTTTTCATTCTTTTGGGCAATAATTAACATTAAAATGGCGATTTTAAACAAAACGGCGTCGTTTTTCTTCAAGTACTTAGCCTAGAATATGAGAAATTTCCAATCTAATTATATGTATCAAAAACTAAAACTATCCTTAATTATATTCATAA

Coding sequence (CDS)

ATGGCTAATCTCTTCCGTTCTCCAAATCCCCATTTCTTCAAGGTCATTCTCCACCAAACTCTAACCCAACAAAAGCTTGACCTTCCAAACAAGTTTGTCAAGAACAATGGCGGTTCTCTGTTATTCAACAAGGTCACTCTCTTCCTTCCCGACGGGGCAAACTGGAAAATCCAACTCAAGAAATTAGACGGAAAAATCTGTTTCCGGAGAGGCTGGCCGGAATTCGTCCAGTTTTATTCTGTTCAACCTGGACATTTCCTAGTGTTCCAGTTGAAAGGAATTTGTTGTTTTAATGTCCTCATTTTCGATACCTCCGCTACCGAAATCGATTATCCAATTCGTCGGTTACTGGATCTGATTCCGAAAAGCAGAAACGAAGATGAAGAGGAATCTATTCAGATACTGAATGAGATGGTTTTGAAGAAGAGGAGAATGGAGAAAGAGGAGGAAACGCCGCCGGCTTATCGTTCGTTGCGAGGACTGAAGAAGATGATGAGGAAGAATGCGAAGGTGAAGATCGCTAAGAATCGAGGAATCACTAGCGATGAAGATGAAGGAGACCTGGAAATGGACAACTCACGGAGACAGAGTAATCACAGAGGAATAGTGTATAATGAGGGAGACGATGGCCGAGTCAGTCCGGAATCGATGAGACCGATGAATCCAAGGAAGACGCCACCGGCATTGACGGAGAATCAACTAGCAGTTAAAAAGAGAGCGAGCTGGTTCAAATCGAGGAGGAATAATCCTTCATTCATGGTGACAATGAGACCTTCCTATATCCAAACAGGAAACTATCTGAGCTTACCGAGGAGATTTGGAGAGAAGTACATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGCGACGGGAGGTGTTGGAGAGTGTGGTGTGGAGTACGATGGGCGTTTACACGGCGGAGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGCGGTGGACAATGAGTTGAAGGAAGGCGATATTTGTGTGTTTGAATTGATGAAGAAAAACGGCTCCGTTTTGTTTAAAGTCGCCATTTTCCGTCTTCCAGATGCTGAATAA

Protein sequence

MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE

Homology

[Close]

BLAST of Cucsat.G15959 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.9e-30
Identity = 108/357 (30.25%), Postives = 162/357 (45.38%), Query Frame = 0


Query: 8   PNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKIC 67
           P P F K+I   T+ +++L +P+KFV      L    V L +PDG  W++ L+K D KI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSV-AVALTVPDGHVWRVGLRKADNKIW 61

Query: 68  FRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS---- 127
           F+ GW EFV  YS++ G+ L+F+ +G   F+V IF+ S +EI+Y    L+D         
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRA 121

Query: 128 ---RNEDEEESIQILNEMVLKKRRMEKEEETPPAYRS------LRGLKKMMRKNAKVKIA 187
               + ++E++  I    V      E        Y S        G  K        KI 
Sbjct: 122 RLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIP 181

Query: 188 KNRGITSDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQL 247
           K RG    +   D E  NS    +         DD     +     + RK      E + 
Sbjct: 182 KKRG--RKKKNADPEEINSSAPRD---------DDPENRSKFYESASARKRTVTAEERER 241

Query: 248 AVKKRASWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKE-SVDVKLEVGDGRC 307
           A+    ++      NP F V +RPSY+  G  + LP  F EKY+   S  +K+++ + + 
Sbjct: 242 AINAAKTF---EPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQ 301

Query: 308 WRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRL 351
           W V C     +   R +   GW  F ++N L EGD+CVFEL++    VL KV  FR+
Sbjct: 302 WPVRC----LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVL-KVTAFRV 337

[Close]

BLAST of Cucsat.G15959 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.1e-17
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 7   SPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKI 66
           SP   FFK++L  T+  + + +P +FVK   GS L   VTL  P G    I+LK++  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQ-GSKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 67  CFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPI 114
            F  GW EF + +S++ GHFL+F+ K    F V+IF+ SA E +YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPL 130

[Close]

BLAST of Cucsat.G15959 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-16
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 7   SPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKI 66
           SP   FFK++L  T+  + + +P +FVK   GS L   VTL  P G    I+LK++  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQ-GSKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 67  CFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPI 114
            F  GW EF + +S++ GHFL+F+ K    F V+IF+ SA E  YP+
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPL 130

[Close]

BLAST of Cucsat.G15959 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-15
Identity = 49/146 (33.56%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 12  FFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKICFRRG 71
           F K+IL   + ++ + +P +FV+   G  L + VTL  P G    I++K++  ++ F +G
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR--FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 93

Query: 72  WPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKSRNEDEE-- 131
           W EF + +S+  GHFL F  +G  CF V+IFD SA+EI+YP+    D   +  ++DE+  
Sbjct: 94  WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGF 153

Query: 132 ---ESIQILNEMVLKKRRMEKEEETP 153
              ES     E+V     ++K+++ P
Sbjct: 154 TGFESSDDDGEVVDMDELLKKKKKKP 177

[Close]

BLAST of Cucsat.G15959 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-12
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 0


Query: 207 GDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRNNPSFMVTMRPSYIQTGNY 266
           GDD     +     + RK      E + AV    ++      NP F V +RPSY+  G  
Sbjct: 87  GDDSENRSKFYESASARKRTVTAEERERAVNAAKTF---EPTNPYFRVVLRPSYLYRGCI 146

Query: 267 LSLPRRFGEKYIKE-SVDVKLEVGDGRCWRVWCGVRWAFTRRRTELKGGWKRFAVDNELK 326
           + LP  F EKY+   S  +KL++G+ + W V C     +   R +   GW  F ++N + 
Sbjct: 147 MYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIG 206

Query: 327 EGDICVFELMKKNGSVLFKVAIFRL 351
           EGD+CVFEL++    VL +V  FR+
Sbjct: 207 EGDVCVFELLRTRDFVL-EVTAFRV 222

[Close]

BLAST of Cucsat.G15959 vs. NCBI nr
Match: XP_031736562.1 (B3 domain-containing transcription factor VRN1-like [Cucumis sativus])

HSP 1 Score: 719 bits (1857), Expect = 8.03e-262
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60
           MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK
Sbjct: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60

Query: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120
           KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI
Sbjct: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120

Query: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180
           PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT
Sbjct: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180

Query: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240
           SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA
Sbjct: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240

Query: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300
           SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV
Sbjct: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300

Query: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE 354
           RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE
Sbjct: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE 354

[Close]

BLAST of Cucsat.G15959 vs. NCBI nr
Match: KAA0045854.1 (B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa] >TYK13734.1 B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 666 bits (1719), Expect = 8.09e-241
Identity = 333/353 (94.33%), Postives = 341/353 (96.60%), Query Frame = 0


Query: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60
           MANLF SPNPHFFKVILHQTLTQQKL+LPNKFVKNNGGS+LFNKVTLFLPDGANWKIQLK
Sbjct: 1   MANLFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLK 60

Query: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120
           K DGKI FRRGWPEFVQFYSVQPG+FLVFQLKGICCFNVLIFDTSATEIDYPIR LLD+I
Sbjct: 61  KSDGKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDII 120

Query: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180
           PKSRNEDEEESIQILNEMVLKKRRMEKEEETP AYRSLRGLKKMMRKNAKVKIAKNRGIT
Sbjct: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETP-AYRSLRGLKKMMRKNAKVKIAKNRGIT 180

Query: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240
           SDEDE DLE DNSRRQSNHRG  YNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA
Sbjct: 181 SDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240

Query: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300
           S FKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGE+YIKESVDVKLEVGDGR WRVWCGV
Sbjct: 241 SRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWRVWCGV 300

Query: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDA 353
           RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELM+KN +VLFKVAIFRLP+A
Sbjct: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPNA 352

[Close]

BLAST of Cucsat.G15959 vs. NCBI nr
Match: XP_008457957.2 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 666 bits (1719), Expect = 3.46e-240
Identity = 333/353 (94.33%), Postives = 341/353 (96.60%), Query Frame = 0


Query: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60
           MANLF SPNPHFFKVILHQTLTQQKL+LPNKFVKNNGGS+LFNKVTLFLPDGANWKIQLK
Sbjct: 40  MANLFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLK 99

Query: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120
           K DGKI FRRGWPEFVQFYSVQPG+FLVFQLKGICCFNVLIFDTSATEIDYPIR LLD+I
Sbjct: 100 KSDGKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDII 159

Query: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180
           PKSRNEDEEESIQILNEMVLKKRRMEKEEETP AYRSLRGLKKMMRKNAKVKIAKNRGIT
Sbjct: 160 PKSRNEDEEESIQILNEMVLKKRRMEKEEETP-AYRSLRGLKKMMRKNAKVKIAKNRGIT 219

Query: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240
           SDEDE DLE DNSRRQSNHRG  YNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA
Sbjct: 220 SDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 279

Query: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300
           S FKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGE+YIKESVDVKLEVGDGR WRVWCGV
Sbjct: 280 SRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWRVWCGV 339

Query: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDA 353
           RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELM+KN +VLFKVAIFRLP+A
Sbjct: 340 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPNA 391

[Close]

BLAST of Cucsat.G15959 vs. NCBI nr
Match: XP_038902137.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 528 bits (1361), Expect = 3.65e-186
Identity = 269/359 (74.93%), Postives = 294/359 (81.89%), Query Frame = 0


Query: 4   LFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLD 63
           LF SPNPHFFK+ILHQ L QQKLDLPNKFVKNNG SLLF+K TL LPDGANW +QLK LD
Sbjct: 3   LFSSPNPHFFKIILHQNLIQQKLDLPNKFVKNNGASLLFSKATLSLPDGANWTVQLKNLD 62

Query: 64  GKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS 123
           GKICF RGWPEFV+FYS+QPG+FLVFQL+ ICCFNVLIFDTSATEIDYP R    LIPK+
Sbjct: 63  GKICFLRGWPEFVEFYSIQPGYFLVFQLRRICCFNVLIFDTSATEIDYPTRPPSVLIPKT 122

Query: 124 RNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITS-- 183
            NED EES++ LN  VLKKR  EKEE+T  AY S R +KKMMRKN K+KI K+RG T+  
Sbjct: 123 ENEDGEESVRTLNGAVLKKRSREKEEKTV-AYCSFREMKKMMRKNVKIKIEKHRGFTTSQ 182

Query: 184 -----DEDEG-DLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLA 243
                DEDE  DLE + SRRQS +RG  YNEGDDGR SPE+MRPMNPRKTPP LTENQL 
Sbjct: 183 GFSYEDEDEDEDLETNYSRRQSTYRGSAYNEGDDGRFSPETMRPMNPRKTPPVLTENQLV 242

Query: 244 VKKRASWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWR 303
           V +RA  FK R NNPSFMVTMRPSYIQTGNYLS+PR F E+YIKES+DVKLE+GDGR WR
Sbjct: 243 VLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSIPRIFAERYIKESMDVKLEIGDGRSWR 302

Query: 304 VWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE 354
           V CGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFEL+ K   V F V IFRLP  E
Sbjct: 303 VLCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTTKVHFHVTIFRLPSPE 360

[Close]

BLAST of Cucsat.G15959 vs. NCBI nr
Match: XP_038902136.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 513 bits (1322), Expect = 8.58e-180
Identity = 269/387 (69.51%), Postives = 294/387 (75.97%), Query Frame = 0


Query: 4   LFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLD 63
           LF SPNPHFFK+ILHQ L QQKLDLPNKFVKNNG SLLF+K TL LPDGANW +QLK LD
Sbjct: 3   LFSSPNPHFFKIILHQNLIQQKLDLPNKFVKNNGASLLFSKATLSLPDGANWTVQLKNLD 62

Query: 64  GKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS 123
           GKICF RGWPEFV+FYS+QPG+FLVFQL+ ICCFNVLIFDTSATEIDYP R    LIPK+
Sbjct: 63  GKICFLRGWPEFVEFYSIQPGYFLVFQLRRICCFNVLIFDTSATEIDYPTRPPSVLIPKT 122

Query: 124 RNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITS-- 183
            NED EES++ LN  VLKKR  EKEE+T  AY S R +KKMMRKN K+KI K+RG T+  
Sbjct: 123 ENEDGEESVRTLNGAVLKKRSREKEEKTV-AYCSFREMKKMMRKNVKIKIEKHRGFTTSQ 182

Query: 184 -----DEDEG-DLEMDNSRRQSNHRGI----------------------------VYNEG 243
                DEDE  DLE + SRRQS +RG                              YNEG
Sbjct: 183 GFSYEDEDEDEDLETNYSRRQSTYRGSGLFRLISLKFNLNFTYQYLKLDEYLPISAYNEG 242

Query: 244 DDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRNNPSFMVTMRPSYIQTGNYL 303
           DDGR SPE+MRPMNPRKTPP LTENQL V +RA  FK R NNPSFMVTMRPSYIQTGNYL
Sbjct: 243 DDGRFSPETMRPMNPRKTPPVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYL 302

Query: 304 SLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEG 354
           S+PR F E+YIKES+DVKLE+GDGR WRV CGVRWAFTRRRTELKGGWKRFAVDNEL+EG
Sbjct: 303 SIPRIFAERYIKESMDVKLEIGDGRSWRVLCGVRWAFTRRRTELKGGWKRFAVDNELEEG 362

[Close]

BLAST of Cucsat.G15959 vs. ExPASy TrEMBL
Match: A0A0A0LMR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292230 PE=4 SV=1)

HSP 1 Score: 719 bits (1857), Expect = 3.89e-262
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60
           MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK
Sbjct: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60

Query: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120
           KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI
Sbjct: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120

Query: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180
           PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT
Sbjct: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180

Query: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240
           SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA
Sbjct: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240

Query: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300
           SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV
Sbjct: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300

Query: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE 354
           RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE
Sbjct: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDAE 354

[Close]

BLAST of Cucsat.G15959 vs. ExPASy TrEMBL
Match: A0A5A7TS22 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002630 PE=4 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 3.92e-241
Identity = 333/353 (94.33%), Postives = 341/353 (96.60%), Query Frame = 0


Query: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60
           MANLF SPNPHFFKVILHQTLTQQKL+LPNKFVKNNGGS+LFNKVTLFLPDGANWKIQLK
Sbjct: 1   MANLFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLK 60

Query: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120
           K DGKI FRRGWPEFVQFYSVQPG+FLVFQLKGICCFNVLIFDTSATEIDYPIR LLD+I
Sbjct: 61  KSDGKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDII 120

Query: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180
           PKSRNEDEEESIQILNEMVLKKRRMEKEEETP AYRSLRGLKKMMRKNAKVKIAKNRGIT
Sbjct: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETP-AYRSLRGLKKMMRKNAKVKIAKNRGIT 180

Query: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240
           SDEDE DLE DNSRRQSNHRG  YNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA
Sbjct: 181 SDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240

Query: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300
           S FKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGE+YIKESVDVKLEVGDGR WRVWCGV
Sbjct: 241 SRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWRVWCGV 300

Query: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDA 353
           RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELM+KN +VLFKVAIFRLP+A
Sbjct: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPNA 352

[Close]

BLAST of Cucsat.G15959 vs. ExPASy TrEMBL
Match: A0A1S3C6V0 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497522 PE=4 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 1.68e-240
Identity = 333/353 (94.33%), Postives = 341/353 (96.60%), Query Frame = 0


Query: 1   MANLFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLK 60
           MANLF SPNPHFFKVILHQTLTQQKL+LPNKFVKNNGGS+LFNKVTLFLPDGANWKIQLK
Sbjct: 40  MANLFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLK 99

Query: 61  KLDGKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLI 120
           K DGKI FRRGWPEFVQFYSVQPG+FLVFQLKGICCFNVLIFDTSATEIDYPIR LLD+I
Sbjct: 100 KSDGKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDII 159

Query: 121 PKSRNEDEEESIQILNEMVLKKRRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT 180
           PKSRNEDEEESIQILNEMVLKKRRMEKEEETP AYRSLRGLKKMMRKNAKVKIAKNRGIT
Sbjct: 160 PKSRNEDEEESIQILNEMVLKKRRMEKEEETP-AYRSLRGLKKMMRKNAKVKIAKNRGIT 219

Query: 181 SDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 240
           SDEDE DLE DNSRRQSNHRG  YNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA
Sbjct: 220 SDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRA 279

Query: 241 SWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGV 300
           S FKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGE+YIKESVDVKLEVGDGR WRVWCGV
Sbjct: 280 SRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWRVWCGV 339

Query: 301 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDA 353
           RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELM+KN +VLFKVAIFRLP+A
Sbjct: 340 RWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPNA 391

[Close]

BLAST of Cucsat.G15959 vs. ExPASy TrEMBL
Match: A0A1S3C614 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497436 PE=4 SV=1)

HSP 1 Score: 508 bits (1309), Expect = 1.44e-178
Identity = 264/361 (73.13%), Postives = 289/361 (80.06%), Query Frame = 0


Query: 5   FRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDG 64
           F SPNPHFFK+ILHQ LTQQKLDLPNKFVKNNG SLLFN V L LPDGA W  QL KLDG
Sbjct: 4   FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDG 63

Query: 65  KICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKSR 124
           K CF RGWPEFV+FYS+QPG+FLVFQLKGICCFNVLIFDTSATEIDYP+RR   LIPKS 
Sbjct: 64  KFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVLIPKSE 123

Query: 125 NEDEEESIQILNEMVLKKR-RMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGIT--- 184
           +EDEEESI IL+E  LKKR RMEK+E+   AY SLR     M+KN ++KI K+R  T   
Sbjct: 124 SEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQ 183

Query: 185 --SDEDEG-----DLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQ 244
             SDEDE      DLE + S RQ+N+RG  YNE +DGR SPESMRPMNPRK P  LTENQ
Sbjct: 184 VFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQ 243

Query: 245 LAVKKRASWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRC 304
           L V +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F E+YIKES+DVKLEVGDGR 
Sbjct: 244 LVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI 303

Query: 305 WRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPDA 354
           W+VWCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFEL+ K   V F V IFRLP+ 
Sbjct: 304 WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP 360

[Close]

BLAST of Cucsat.G15959 vs. ExPASy TrEMBL
Match: A0A0A0LM04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287160 PE=4 SV=1)

HSP 1 Score: 508 bits (1308), Expect = 1.71e-178
Identity = 260/356 (73.03%), Postives = 287/356 (80.62%), Query Frame = 0


Query: 4   LFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLD 63
           LF SPNPHFFK++LHQ LTQQKLDLPNKFVKNN  SLLFN  TL LPDG+ W  QL +LD
Sbjct: 3   LFTSPNPHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLD 62

Query: 64  GKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS 123
           GKICF RGWPEFV FY+VQPG+FLVFQLKGICCFNVLIFDTSATEIDYP+RRL  ++PKS
Sbjct: 63  GKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKS 122

Query: 124 RNEDEEESIQILNEMVLKKRR-MEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNR----- 183
            ++DE ESIQIL+E VLKKRR MEK+E+   AY SLR +KK    N K+KI K R     
Sbjct: 123 ESDDEGESIQILHEEVLKKRRRMEKKEKETSAYYSLREMKK----NMKIKIMKRREFTTP 182

Query: 184 -GITSDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAV 243
            G + D+++ DLE D S RQ+N+R   YNE +DGR SPESMRPMNPRKT   LTENQL V
Sbjct: 183 QGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV 242

Query: 244 KKRASWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRV 303
            +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F E+YIKESVDVKLEVGDGR W+V
Sbjct: 243 VRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKV 302

Query: 304 WCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLPD 352
           WCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFELM K   V F V IFRLP 
Sbjct: 303 WCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 354

The following BLAST results are available for this feature:

BLAST of Cucsat.G15959 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	1.9e-30	30.25	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9ZSH7	9.1e-17	41.12	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q84R27	2.0e-16	41.12	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]
Q9XIB4	1.0e-15	33.56	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]
Q9XIB5	2.3e-12	33.10	B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1...	[more]

BLAST of Cucsat.G15959 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736562.1	8.03e-262	100.00	B3 domain-containing transcription factor VRN1-like [Cucumis sativus]	[more]
KAA0045854.1	8.09e-241	94.33	B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa] >...	[more]
XP_008457957.2	3.46e-240	94.33	PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]	[more]
XP_038902137.1	3.65e-186	74.93	B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispid...	[more]
XP_038902136.1	8.58e-180	69.51	B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispid...	[more]

BLAST of Cucsat.G15959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMR6	3.89e-262	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292230 PE=4 SV=1	[more]
A0A5A7TS22	3.92e-241	94.33	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C6V0	1.68e-240	94.33	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S3C614	1.44e-178	73.13	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LM04	1.71e-178	73.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287160 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 12..105 e-value: 1.9E-15 score: 67.3
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 12..104 e-value: 3.1E-12 score: 46.3
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 11..105 score: 11.828987
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 10..103 e-value: 1.43592E-17 score: 74.2865
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 4..106 e-value: 2.5E-23 score: 83.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 5..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..206
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 4..267
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 4..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15959.T1	Cucsat.G15959.T1	mRNA
Cucsat.G15959.T2	Cucsat.G15959.T2	mRNA
Cucsat.G15959.T3	Cucsat.G15959.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding