Cucsat.G15871 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15871
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	photosystem I subunit F
Location	ctg211: 94643 .. 96434 (+)
RNA-Seq Expression	Cucsat.G15871
Synteny	Cucsat.G15871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGGGGTTGGTCTCTTATCCAAGATAGAAGGAGAGAATCATAATACAAAGTTGTGCCAATTACAACTATCCAACTCAGCTTTTCCCTTACTCTCTTCATCTTATCCAAAACCACCTTCTCCACCACTAATCTCATGATCCTCTCTGAATCTAAAACCGTTCCCTCCACACTCTTTCTCCAAATCTCCATCTTCTTCTTCCTGCAATTCCCAATTCCTTCGAACCCATTTCAACAATGTCTCTCACAATCCCCACTAACCTCTCAAAACCCCTCTTGAAGCCCAAATTTAGCTCCCCACTCGCCTTGAAGCCAAAACCCTCCTCATCTATTCTCTGCTCCGCCTCCCAAAATCAAAACCAAAACACCTCTTCCTCTCTTCAAGCCTTCTCCGCTGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCTCCTCTCCCCGCCGTCGCCGACATCTCCGGTCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTGAGTCTTCTTTGAAGAACTACGCCCCGGATAGCGCCCCGGCGCTTGCCATCAAAGCCACGATCGAAAAGACAAAGAGGCGATTTGCCTTCTATGGGAAACAAGGGCTTCTTTGTGGTGCTGATGGCTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATTACTCCTGGATTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGAAAAGAAACCTACCCAAAAGGAGATTATCATTGATGTTCCTTTGGCCACTAGTTTGGTGTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAAGATGTCTAATTCTTCTACTTCAGGTACTGCTCTTCTTTTTGTTGCAGTTAAGTTGAGTGATTCAATGGAGTATTTGAATTGGTTGTTATGTCTCTGAATTGCTTTATGCTAATTTTCAAGCTCATAAGTGAATATACCATAAAAATGGATTTAGCTATGTTTCTTTAGGAGTGGTGTTTCCATGGCCAATCTGCTCCTTTGATTATTGGGTATTCCAAGTGTGGTTCATAAAGTGTTAGAGCACATAATTCTATGTCTTATTCATCATAACATCACTTACTTCTTAATTGATACTGATATTGATATTTGTTTGTTGGTATCGGTGATTTTCTAGTTAGAAGTGCAGTGAAGGTCTTACAATGTAATCGATGTACTTCAACTTCTTATAATGTAATGGATGTGATTATGTTTTTAGCTTTAATGGTGATTTAACACGAAGAACAAAAAGATGGTCTTTATTTATTATTGGTTGTCTTTTTTTTTTCTTTTTTATGAATTCTCTCTTTATGTATGTTTTACCAACGGCCAATCTTCTCATTTGTTTCATATTGTTTTGTTGTGGTATTGACAGAGATAGGGAAAGTGGAAGTGGAATTGAGTTTTGGAGGATATGGAGGGGAATGGCATGGAGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGAGATGAGTATATGTAATGGTTGGTTTGTGTTGGATACAAGGGCAATCTATTCTTTTCACTTCCCCTTTCTTTTGTACTCAAAATTCTCTTAACATGATTGACCCATCAATCTTTTCTTAAGTAATTAATTAGAAATTTTCATTCAAATTCTTAATGTTGATGTTTTGAAAAGAGGGTAACAGCAATACCACAGAAGCATAAAGATGAGAGATAGAGAGAGATGA

Coding sequence (CDS)

ATGTCTCTCACAATCCCCACTAACCTCTCAAAACCCCTCTTGAAGCCCAAATTTAGCTCCCCACTCGCCTTGAAGCCAAAACCCTCCTCATCTATTCTCTGCTCCGCCTCCCAAAATCAAAACCAAAACACCTCTTCCTCTCTTCAAGCCTTCTCCGCTGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCTCCTCTCCCCGCCGTCGCCGACATCTCCGGTCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTGAGTCTTCTTTGAAGAACTACGCCCCGGATAGCGCCCCGGCGCTTGCCATCAAAGCCACGATCGAAAAGACAAAGAGGCGATTTGCCTTCTATGGGAAACAAGGGCTTCTTTGTGGTGCTGATGGCTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATTACTCCTGGATTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGAAAAGAAACCTACCCAAAAGGAGATTATCATTGATGTTCCTTTGGCCACTAGTTTGGTGTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAAGATGTCTAA

Protein sequence

MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV

Homology

[Close]

BLAST of Cucsat.G15871 vs. ExPASy Swiss-Prot
Match: P46486 (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia OX=4227 GN=PSAF PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.0e-87
Identity = 176/228 (77.19%), Postives = 193/228 (84.65%), Query Frame = 0


Query: 1   MSLTIPTNLSKPL-LKPKFSSPLALKPK-PSSSILCSASQNQ---NQNTSSSLQAFSAAL 60
           MS TI T+  +PL +    SSP+  K K  S+SI+CS S ++   N +  SSL+A SAAL
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAAL 60

Query: 61  ALSSILLSA---PLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAI 120
           ALSSIL+S+    LPA ADISGLTPCKESKQFAKREKQ +KKLESSLK YAPDSAPALAI
Sbjct: 61  ALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAI 120

Query: 121 KATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 180
           KAT+EKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 181 SYLIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           SYLIAIRDEKKPTQKEIIIDVPLAT L+FRGFSWPVAAYRE +NGELI
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228

[Close]

BLAST of Cucsat.G15871 vs. ExPASy Swiss-Prot
Match: Q9SHE8 (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAF PE=1 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.6e-86
Identity = 167/225 (74.22%), Postives = 188/225 (83.56%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALK-PKPSSSILCSASQNQNQNTSSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ +  L    PK S+  +CS     + +T  S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCS-DDKSSSSTPQSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA+ A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YGK GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 DEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
            EKKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

[Close]

BLAST of Cucsat.G15871 vs. ExPASy Swiss-Prot
Match: P12355 (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAF PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.6e-83
Identity = 168/229 (73.36%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 1   MSLTIPTNLSKPL-LKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAF----SAAL 60
           MS TIPTNL KPL  KPK  S  +  P+  S I+C    +Q Q     L       +AAL
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPR--SKIVCQQENDQQQPKKLELAKVGANAAAAL 60

Query: 61  ALSSILLS----APLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA 120
           ALSS+LLS    AP  A+ADI+GLTPCKESKQFAKREKQ +KKL++SLK YA DSAPALA
Sbjct: 61  ALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALA 120

Query: 121 IKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 180
           IKAT+EKTK+RF  YGK GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVG
Sbjct: 121 IKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVG 180

Query: 181 RSYLIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           RSYLIAIRDEKKPTQKEIIIDVPLA+SL+FRGFSWPVAAYREL+NGEL+
Sbjct: 181 RSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227

[Close]

BLAST of Cucsat.G15871 vs. ExPASy Swiss-Prot
Match: P13192 (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAF PE=1 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 1.7e-77
Identity = 149/215 (69.30%), Postives = 170/215 (79.07%), Query Frame = 0


Query: 19  SSPLALKPKPSSSILCSASQNQNQNT------SSSLQAFSAALALSSILLS----APLPA 78
           + P   +P    S+ CSAS   N N+      S+S++ FSAALALSS+LLS    +P PA
Sbjct: 16  AKPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAATSPPPA 75

Query: 79  VADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGK 138
            ADI+GLTPCKESK FAKREKQ +KKL SSLK YAPDSAPALAI+ATI+KTKRRF  YGK
Sbjct: 76  AADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGK 135

Query: 139 QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKE 198
            GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIA+  EKKP  +E
Sbjct: 136 FGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMRE 195

Query: 199 IIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           IIIDV LA  ++ RGF WPVAAYREL+NG+L+  D
Sbjct: 196 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230

[Close]

BLAST of Cucsat.G15871 vs. ExPASy Swiss-Prot
Match: P12356 (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAF PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.1e-51
Identity = 113/212 (53.30%), Postives = 147/212 (69.34%), Query Frame = 0


Query: 17  KFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALAL-SSILLSAPLPAVADISGL 76
           K SS +A   + +  + C A +N+   T+S +    AA AL +++ LSAP  A+ADI+GL
Sbjct: 11  KASSRVAPSSRRALRVACQAQKNE---TASKVGTALAASALAAAVSLSAPSAAMADIAGL 70

Query: 77  TPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGA 136
           TPC ESK +AK EK+++K LE  LK Y  DSAPA+A+KAT+E+TK RFA Y K GLLCG 
Sbjct: 71  TPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGN 130

Query: 137 DGLPHLI----VSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIII 196
           DGLPHLI    ++    H GE   P F FLY+AG+IG+VGR YLIA++ E KPT KEIII
Sbjct: 131 DGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIII 190

Query: 197 DVPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           DVPLAT L ++G  WP+AA +EL  G L+ K+
Sbjct: 191 DVPLATKLAWQGAGWPLAAVQELQRGTLLEKE 219

[Close]

BLAST of Cucsat.G15871 vs. NCBI nr
Match: XP_004150631.1 (photosystem I reaction center subunit III, chloroplastic [Cucumis sativus] >KGN66911.1 hypothetical protein Csa_006875 [Cucumis sativus])

HSP 1 Score: 434 bits (1116), Expect = 3.11e-153
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]

BLAST of Cucsat.G15871 vs. NCBI nr
Match: XP_008459076.1 (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis melo] >KAA0043281.1 photosystem I reaction center subunit III [Cucumis melo var. makuwa] >TYK29345.1 photosystem I reaction center subunit III [Cucumis melo var. makuwa])

HSP 1 Score: 418 bits (1075), Expect = 5.95e-147
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSA--SQNQNQNTSSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPK SSPLALKPKPSSSILCSA  +QNQ+QN SSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALAIKATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           R+EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Cucsat.G15871 vs. NCBI nr
Match: XP_038895167.1 (photosystem I reaction center subunit III, chloroplastic [Benincasa hispida])

HSP 1 Score: 417 bits (1073), Expect = 1.12e-146
Identity = 215/224 (95.98%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPK SSPL  KPKPSSSILCSA+QNQNQN SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA+KATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYG QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 
Sbjct: 121 RRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRG 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           +KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]

BLAST of Cucsat.G15871 vs. NCBI nr
Match: XP_022994929.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita maxima])

HSP 1 Score: 410 bits (1055), Expect = 6.20e-144
Identity = 209/224 (93.30%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKFSS LA K +PSSSILCSA+QNQN+  SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++EKTK
Sbjct: 61  LLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           +KKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 224

[Close]

BLAST of Cucsat.G15871 vs. NCBI nr
Match: XP_023542340.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407 bits (1047), Expect = 1.14e-142
Identity = 210/227 (92.51%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQN---QNTSSSLQAFSAALAL 60
           MSLTIPTNLSKPLLKPKFSS LA K +PSSSILCSA+QNQN   +N SSSLQAFSAALAL
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALAL 60

Query: 61  SSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIE 120
           SSILLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++E
Sbjct: 61  SSILLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVE 120

Query: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180
           KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA
Sbjct: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180

Query: 181 IRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           IRD+KKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 227

[Close]

BLAST of Cucsat.G15871 vs. ExPASy TrEMBL
Match: A0A0A0M3X2 (PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1)

HSP 1 Score: 434 bits (1116), Expect = 1.51e-153
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]

BLAST of Cucsat.G15871 vs. ExPASy TrEMBL
Match: A0A5D3E1S6 (PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 2.88e-147
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSA--SQNQNQNTSSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPK SSPLALKPKPSSSILCSA  +QNQ+QN SSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALAIKATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           R+EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Cucsat.G15871 vs. ExPASy TrEMBL
Match: A0A1S3C8V6 (PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 2.88e-147
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSA--SQNQNQNTSSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPK SSPLALKPKPSSSILCSA  +QNQ+QN SSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALAIKATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           R+EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]

BLAST of Cucsat.G15871 vs. ExPASy TrEMBL
Match: A0A6J1K487 (PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1)

HSP 1 Score: 410 bits (1055), Expect = 3.00e-144
Identity = 209/224 (93.30%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKFSS LA K +PSSSILCSA+QNQN+  SSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++EKTK
Sbjct: 61  LLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           +KKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNGELIAKDV
Sbjct: 181 DKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGELIAKDV 224

[Close]

BLAST of Cucsat.G15871 vs. ExPASy TrEMBL
Match: A0A6J1GT12 (PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1)

HSP 1 Score: 406 bits (1044), Expect = 1.59e-142
Identity = 209/227 (92.07%), Postives = 220/227 (96.92%), Query Frame = 0


Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQN---QNTSSSLQAFSAALAL 60
           MSLTIPTNLSKPLLKPKFSS LA K +PSSSILCSA+QNQN   +N SSSLQAFSAALAL
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALAL 60

Query: 61  SSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIE 120
           SSILLSAPLPAVADI+GLTPCK+SKQFAKREKQQIKKLESSLKNYAPDSAPALAI+A++E
Sbjct: 61  SSILLSAPLPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVE 120

Query: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180
           KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA
Sbjct: 121 KTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIA 180

Query: 181 IRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224
           IRD+KKPTQKEIIIDVPLATSLVFRGFSWP+AAYRELVNG+LIAKDV
Sbjct: 181 IRDDKKPTQKEIIIDVPLATSLVFRGFSWPIAAYRELVNGDLIAKDV 227

The following BLAST results are available for this feature:

BLAST of Cucsat.G15871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46486	9.0e-87	77.19	Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia O...	[more]
Q9SHE8	2.6e-86	74.22	Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana...	[more]
P12355	4.6e-83	73.36	Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX...	[more]
P13192	1.7e-77	69.30	Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4...	[more]
P12356	6.1e-51	53.30	Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinha...	[more]

BLAST of Cucsat.G15871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150631.1	3.11e-153	100.00	photosystem I reaction center subunit III, chloroplastic [Cucumis sativus] >KGN6...	[more]
XP_008459076.1	5.95e-147	96.46	PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis mel...	[more]
XP_038895167.1	1.12e-146	95.98	photosystem I reaction center subunit III, chloroplastic [Benincasa hispida]	[more]
XP_022994929.1	6.20e-144	93.30	photosystem I reaction center subunit III, chloroplastic [Cucurbita maxima]	[more]
XP_023542340.1	1.14e-142	92.51	photosystem I reaction center subunit III, chloroplastic [Cucurbita pepo subsp. ...	[more]

BLAST of Cucsat.G15871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3X2	1.51e-153	100.00	PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1	[more]
A0A5D3E1S6	2.88e-147	96.46	PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=...	[more]
A0A1S3C8V6	2.88e-147	96.46	PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1	[more]
A0A6J1K487	3.00e-144	93.30	PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1	[more]
A0A6J1GT12	1.59e-142	92.07	PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003666	Photosystem I PsaF, reaction centre subunit III	PFAM	PF02507	PSI_PsaF	coord: 58..223 e-value: 3.2E-81 score: 271.3
IPR003666	Photosystem I PsaF, reaction centre subunit III	PANTHER	PTHR34939	PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC	coord: 1..224
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	GENE3D	1.10.8.110	Photosystem I PsaF, reaction centre subunit III	coord: 71..224 e-value: 2.5E-74 score: 250.0
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	SUPERFAMILY	81536	Subunit III of photosystem I reaction centre, PsaF	coord: 71..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15871.T1	Cucsat.G15871.T1	mRNA
Cucsat.G15871.T2	Cucsat.G15871.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I