Cucsat.G15699 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15699
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transposon Ty3-G Gag-Pol polyprotein
Location	ctg2009: 6084293 .. 6088594 (+)
RNA-Seq Expression	Cucsat.G15699
Synteny	Cucsat.G15699

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGCTGAAGGGGTTAATGTGATCATGGTGGTAGTTGACCGGCTGAGTAAGTATTCTTACTTTATATCAATGAGACATCCGTTTTCAGCTAAGCACGTTGCCTCCATATTCATCGACAGAATAGTAAGCAAGCACGACATTCCTAAGTCGATTATCACAGACCGGGATAAAATCTTTCTTAGTAATTTTTGGAAAGAACTGTTTGCAACTATGGGGACTATTCTAAAGAGGAGTATGGTGCTTCACCCACAAACTGATGGGCAGACAGAAAGGGTAAATAGATGTCTTGAAACTTATCTGAGATGCTTCTGTAATGAACAACCAAAAAAATGGGATAGACTGATTCCATGGGCAGAATTGTGGTATAATACCACATTCCATGCATCCACCAAAGTGACCCCTTTTCAGACGGTATACGGTAGACCGCCTCCTCCCCTGTTATCCTATGGTTACAAGAAAACTCCTAATAATGAGGTTGACACACTGCTGAAAGAACGTGACTTAGCCATCAATGCCTTAAAGGAAAACCTGTGTGTAGCCCAGAACAGGATGAAGAAAATGGCTGATCGAAATAGAAGAGAGTTAAAATTTAAGGTAGGAGATGAAGTCTACTTGAAATTGAGACTTTACCGGCAACGCTCCTTAGCTCGGAAGAAGTGTGAGAAGTTAGCACCTAAATATTACGGACCCTACAAACTTATTGAAGAAATAGGAGCAGTTGCGTACAGATTGATGTTACCCCTGGAAGCCAGTATCCACAATGTGTTCCATATTTCTCAGTTAAAACTAAAACTAGGTAATCAACAAGCTGTTCAACACCAGCAACCTATGCTAACGGAAGAGTTTGAGTTACAATTATGGCTAGAAATAGTGTTGGGAGTCCGTTGGAATCAGGAATTGGGAGGAAATGAATGGTTAATCAAATGGAAAGGGCTGCCGGACAGTGAAGCAACTTGGGAATCTGTTTTCCAAATGAACCAACAATTCCCTGACTTTCACGTTGAGGACAAGGTGAACCTGGAACCGAGGGGTATTGTAAGGCCCCCTATTATCCATACATACAAAAGGAGGGGTAAAAACGTAAAAGCTCACGCAGCATAAAAGGGGAGAATATTAGGAAAAGAACATGAGAGTGGGGCCCACGGGGAGGAATGAGAAAAGAGCTACAAATAAGACTTATCGGGATTGGGGGCTAGGTTAACTTTTTGTCTTCATTGGGTCTGTAGAGGCTGCTAGGTCTAGGAAAGAATACTATCCTTTCCTAGGGAGGTTTGACATGATATTATCATCACGTCAGAAAGCCTCTTAGATGGACCTTCCTTTCAAGCTTCGCCCGCAACCGTTCCTCTCAATGTAATTGTCCTCATCGGAAAGTTGGTATTGCCTTTATTATCATTGTTACTCGTAGCCATATTACACTTGGCACTAGTCGAAGGATATATGGGAAGTTTCCCTCCAGAATATCCCGAAAGATTTGCCTCCTTTCTTATAACTTCTCGATTCTCCACCATTTGCACCAACCTCATCATCTATGATCATCCTACTGGTTCACAAAACTCCACTTTGGCCTTTATCCACGGAAGTAATCCTCCCATAAATGTTTCCTCAACTACTTTCTCCTCTAAATTTGATAATGGTGCCACCAATTCATCAAATAGATTCCTATACTCTTCTACAATGGATTCTTGTTTAATTTTAAAAAATCGGCCACAAACCGTTCCCTCTCGAATTGATCGAAACCGTATTAACAACCTTTCTTTCAAATTCGACTAGTTGGTAAATTTTTCCCTCTCTTCTTGAGATCGATACCTATTTAAGGCTGGGCCTTTGAAGCTAATAGTTGCTACAATCAATTTTTCGAAATCCGTAAGCTTTCTTGGTGGTTGTTCAATGAACTGTGAATTCCCTTCAAAGAATATTCAACGTACATCAAGCATATTGTTGTATTTCTTGGAGAGAGGGTTCTTGCACCTGAGCATTTCCTCTGATCGGGTGGGTAACTCTTCTTCCCACCATTCTAGTATTCCTCGCTTTGTTACCAATTTGGTGTACAAACCAAAACTCTAATTTTGAATCAAAATGAATCTCTTCCTCTAAATGAGGAGAGAGGACTTTATTTATAGTCAAATTGGTACAAACTAGTAAAATAACAACCAACTAACTAACTATTTTAACTTGCTCTTAATTCCTGTACAAAGAGCTTCTCTCAGTACTGAGTTCACTATTAAGCCGATGGATTATTCCATAAATTACTCACTAATACTTCTTTCTTCTATGTGATAGGTGATAGCAAACTTGGAGGCAAAATTGTCTTTTAGACTAATTCCAACCATATCAGACTAAATCCGTATGCCATCTCCTTTCCTCACCTTGCTGATGATGTGGTCATAGACTGTTTCTTTATCCTTCTCAATGTATTTTCAGGGTCCCTTTGAGATTAATGTAGTTGCTCCCACTGGCCAAAAGGGCAGGCGCCATATTTCAAGGCAATCAACTTCCTCCAAAGGGCTGAGTTTTACTTATGAAATCTCCAAACCATCGACAAGGAAATATTTTTCTGTTCTAGATTTGTAATCTACTTCCATTAGAGCCTGGTTTTCTTCTCATTCAAGATTGTGTGTACCTCCCTTCTCTTTGTTGCCCTTCTACTCAAGAAGTTTCAAAATAGCCTCCCAATGGAAGCCGAAATCTTTGTGGTTGTAGGAAAAAGGGATAAATAATAAATCGGTTGGTTGGCTTAGATTGCTTGAGAGTAATGTGACCCCTTTTAGAAATCTGTATGTCTCCAAGGATTAAACTGGACCCATGGCAGCAATGCAGGATTTTCAGAGCCTGTAGATGTGTGGGAGCAGATTGATGCATGTGGTAGAGAGGGGGATGTTTGCTAGGAATGGGGGAAAGTACACCAAGCTTGGTAAGAGGGTTAGGTACTGCACTGATACAATTGCCTTTGCGCAGCTCTGTGGCACAGTTTTGATGGAGCTGGTGCAGTTTGTGTGGGGGAATAGCTATTGGATTTGGGCAAGTCATAAAGGCAAAGCCACTTCTTTGGGAGTGCGCGCATGTGTTAGAACTCCAACAAGATTTGTGGTATTTTGCGTTGGGTCCACTACAAAAAATGGGTTGATTTGTACTACCAAAGGACGAAGTAAAAGACAGCAAGGTTGATCCTAGAGTCTCCCAAGGATCGAGCCGACATGTGTTATCTTGTATACTTCAAAATTTTGGAAAGGTTGCCTGTCATAAAATTTGTTGAAAATGGGTGTACATTATATTTGTAGCTTTGGTACTTATTTGTAGATACGCTCTGTTCTTTCGTCACAAGTTGGTTAGGACTATAACTTGCTTTAGAAGTTGATTTTACTGAATGTTGTCATGTGTTATTATACTCGTGATTGTGAATATGGTTTTTTTCTTTTTCCTATTCACTGTTTACTATGTTGCAGTTCACTGAATGCTTCACTTTCAGGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAGTTCTTGAGAGTATATAGTCCAGCTGCTGATGCTAAAATCCGGTCAATTGGGGGTGAAAAGGTACTATAGAAACAATTTTTTGTTTCATTTCTATCTAAAAATTTGAACAATCCCTTAAGGGGTGTTTAAATAGCCAAATTGGAATGGTGGGATGATTTGTAAGAGCGGTACTTTTTGAGTGACACTCCCTTTTAATATTTGTGGAAAACTATCTAATTCAACGAAGTATAGTTTCCAAGAAAACTGGATAGATGGATGCTACGTTTTGGACTAATTCTCTTTGAGCCCTTTACATTATGCATTTGGTCTCGACAACAACTAAGGCAATCCACGATAGACTGCTTTTATAAGTACCATTCTGAAAGACATACCGCATGCCCAATACGTTCTACAACTTCTACAGCATTAAATATTGCAATGCCAAACTAATCTCATTAAGTTTATTTCTTAAAAAAAAAAAGAGGTTTATGTGTAAGTTGGTTCAAACATCCACACAAGGGTTTGACCAACCGCTGATTTTGTAGAATTTTATGTTTAGCCTAATTCGCACAACCCAATGCATCTACTGATTTTTTAATATCATATGGAGTATTGTCTGCTTTTTTCTTTTATCAGATTCAATTACTAAATGCATGTTCGAAACCAGGTAATCTCTGGACGACGTCATGTAGGTATTATGTCTGCTGAACCAGTTGGGAACTATGGGGTAAGGTACTTATCACTCATTAATATATGTCTCTGAATTTTACCAATCTTTTGGTATTGACTCGTGGAAGAATTGAAATCTTAGATCAAAACATAAAGTATGGATGGTATGAACTGCCTTTTCTTGAATCCTTACATATCTGTTGCAATTTTCTAGGATCCTTTTTGACGATTTGCATAGAACTGGGATTTATTCGTGGGATTATTTCTTTCATCTTGGGAGCAACAAATTCACTCTCTTGAGAAATTATGTTAAAACACTGAAGAAGCATGGGCTGAGCCGAGATCCACCAAAGAGAAAATGATGGACAAATCAACTGTCTCCAACCACGAACATCACGAACATCGTATGCAAGATAATCATTGAGTGTTTGGGTCAACTGACAAACTCCTTGAAGAAATCATGCAACAATTAGATTGGTTTGAAAAAATAAGGCAAGCTGTCTCAGTACTGGCTGATGAAAAAGATTCAACTGTTATACTAGGCAACGAAAAGAATTTTCTTAGTTTTCTGTTTCAAATTTTACCTATAAGCTATATGCTTCTAAGAACCTGAGCGTGAAAAATAGACATGTTGCTATAGCTCCTTGCTAGATTATCTAATGAATCGTGTTAAATTATCATTTCAACGGTTTCATTATGCCCATGAAATATTTTGTTGTCTTTATCACTAGCATTGCTCATTATGATGATGTGCATGATTATACGATAAGGTGGATAAATGATTGGAAGAAGCTAGTATATAAAATAAATGATTGTAAGAAGCGTTAACAGTTAAAAGGAAGTTGGGGTTATTAAATTAGTT

Coding sequence (CDS)

CTAGCTGAAGGGGTTAATGTGATCATGGTGGTAGTTGACCGGCTGAGTAAGTATTCTTACTTTATATCAATGAGACATCCGTTTTCAGCTAAGCACGTTGCCTCCATATTCATCGACAGAATAGTAAGCAAGCACGACATTCCTAAGTCGATTATCACAGACCGGGATAAAATCTTTCTTAGTAATTTTTGGAAAGAACTGTTTGCAACTATGGGGACTATTCTAAAGAGGAGTATGGTGCTTCACCCACAAACTGATGGGCAGACAGAAAGGGTAAATAGATGTCTTGAAACTTATCTGAGATGCTTCTGTAATGAACAACCAAAAAAATGGGATAGACTGATTCCATGGGCAGAATTGTGGTATAATACCACATTCCATGCATCCACCAAAGTGACCCCTTTTCAGACGGTATACGGTAGACCGCCTCCTCCCCTGTTATCCTATGGTTACAAGAAAACTCCTAATAATGAGGTTGACACACTGCTGAAAGAACGTGACTTAGCCATCAATGCCTTAAAGGAAAACCTGTGTGTAGCCCAGAACAGGATGAAGAAAATGGCTGATCGAAATAGAAGAGAGTTAAAATTTAAGGTAGGAGATGAAGTCTACTTGAAATTGAGACTTTACCGGCAACGCTCCTTAGCTCGGAAGAAGTGTGAGAAGTTAGCACCTAAATATTACGGACCCTACAAACTTATTGAAGAAATAGGAGCAGTTGCGTACAGATTGATGTTACCCCTGGAAGCCAGTATCCACAATGTGTTCCATATTTCTCAGTTAAAACTAAAACTAGGTAATCAACAAGCTGTTCAACACCAGCAACCTATGCTAACGGAAGAGTTTGAGTTACAATTATGGCTAGAAATAGTGTTGGGAGTCCGTTGGAATCAGGAATTGGGAGGAAATGAATGGTTAATCAAATGGAAAGGGCTGCCGGACAGTGAAGCAACTTGGGAATCTGTTTTCCAAATGAACCAACAATTCCCTGACTTTCACGTTGAGGACAAGGTGAACCTGGAACCGAGGGGTATTGTAAGGCCCCCTATTATCCATACATACAAAAGGAGGGGTAAAAACGTAAAAGCTCACGCAGCATAA

Protein sequence

LAEGVNVIMVVVDRLSKYSYFISMRHPFSAKHVASIFIDRIVSKHDIPKSIITDRDKIFLSNFWKELFATMGTILKRSMVLHPQTDGQTERVNRCLETYLRCFCNEQPKKWDRLIPWAELWYNTTFHASTKVTPFQTVYGRPPPPLLSYGYKKTPNNEVDTLLKERDLAINALKENLCVAQNRMKKMADRNRRELKFKVGDEVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQLKLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWESVFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA

Homology

[Close]

BLAST of Cucsat.G15699 vs. NCBI nr
Match: XP_031737236.1 (uncharacterized protein LOC116402184 [Cucumis sativus] >XP_031744846.1 uncharacterized protein LOC116405175 [Cucumis sativus] >XP_031745413.1 uncharacterized protein LOC116405619 [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 9.54e-109
Identity = 154/165 (93.33%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKKCEKLAPKYYGPYK+ EEIGAVAYRLMLP EASIHNVFHISQL
Sbjct: 19  EVYLKLRPYRQRSLARKKCEKLAPKYYGPYKITEEIGAVAYRLMLPPEASIHNVFHISQL 78

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           KLKLG+QQAVQHQQP LTEEFELQLW E VLGVRWN+ELGGNEWLIKWKGLPDSE TWES
Sbjct: 79  KLKLGSQQAVQHQQPRLTEEFELQLWPETVLGVRWNRELGGNEWLIKWKGLPDSETTWES 138

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 165
           VFQMNQQFPDFH+EDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA
Sbjct: 139 VFQMNQQFPDFHLEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 183

[Close]

BLAST of Cucsat.G15699 vs. NCBI nr
Match: XP_031745420.1 (uncharacterized protein LOC116405633 [Cucumis sativus])

HSP 1 Score: 317 bits (813), Expect = 4.92e-108
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKKCEKLAPKYYGPYK+ EEIGAVAYRLMLP EASIHNVFHISQL
Sbjct: 19  EVYLKLRPYRQRSLARKKCEKLAPKYYGPYKITEEIGAVAYRLMLPPEASIHNVFHISQL 78

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           KLKLG+QQAVQHQQP LTEEFELQLW E VLGVRWN+ELGGNEWL+KWKGLPDSE TWES
Sbjct: 79  KLKLGSQQAVQHQQPRLTEEFELQLWPETVLGVRWNRELGGNEWLLKWKGLPDSETTWES 138

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 165
           VFQMNQQFPDFH+EDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA
Sbjct: 139 VFQMNQQFPDFHLEDKVNLEPRGIVRPPIIHTYKRRGKNVKAHAA 183

[Close]

BLAST of Cucsat.G15699 vs. NCBI nr
Match: TYK29412.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 7.43e-94
Identity = 133/163 (81.60%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKK EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPYRQRSLARKKSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP+SEATWES
Sbjct: 76  KPKLGNQQVVQRQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPESEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]

BLAST of Cucsat.G15699 vs. NCBI nr
Match: KAA0044281.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (698), Expect = 4.10e-91
Identity = 131/163 (80.37%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR  RQRSLARK+ EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPCRQRSLARKRSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP SEATWES
Sbjct: 76  KPKLGNQQVVQCQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPGSEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]

BLAST of Cucsat.G15699 vs. NCBI nr
Match: KAA0040538.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (702), Expect = 5.91e-89
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKL+ YRQRSLARKK EKLAP+YYGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 213 EVYLKLKPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAVAYRLDLPPEAAIHNVFHISQL 272

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG QQ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+GLP+S+ATWES
Sbjct: 273 KPKLGAQQVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQGLPESDATWES 332

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+EDKVN+EPRGIVRPPI+HTYKRR   V
Sbjct: 333 VYQMNQQFPSFHLEDKVNVEPRGIVRPPILHTYKRRDSKV 372

[Close]

BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5D3E0H6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00020 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 3.60e-94
Identity = 133/163 (81.60%), Postives = 147/163 (90.18%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKK EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPYRQRSLARKKSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP+SEATWES
Sbjct: 76  KPKLGNQQVVQRQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPESEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]

BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5A7TRS1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00020 PE=4 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.99e-91
Identity = 131/163 (80.37%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR  RQRSLARK+ EKLAP++YGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 16  EVYLKLRPCRQRSLARKRSEKLAPRFYGPYKIIEEIGAVAYRLELPPEAAIHNVFHISQL 75

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLGNQQ VQ Q PMLTE+FELQLW E VLG+RW++ELG NEWLIKW+GLP SEATWES
Sbjct: 76  KPKLGNQQVVQCQHPMLTEDFELQLWPETVLGIRWSKELGANEWLIKWQGLPGSEATWES 135

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNVKAH 163
            +QMNQQFP FH+EDKVN+EPRGIVRPPIIHTYKRRG+ V  H
Sbjct: 136 TYQMNQQFPSFHLEDKVNVEPRGIVRPPIIHTYKRRGRMVNKH 178

[Close]

BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5A7TCB1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00920 PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.86e-89
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKL+ YRQRSLARKK EKLAP+YYGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 213 EVYLKLKPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAVAYRLDLPPEAAIHNVFHISQL 272

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG QQ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+GLP+S+ATWES
Sbjct: 273 KPKLGAQQVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQGLPESDATWES 332

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+EDKVN+EPRGIVRPPI+HTYKRR   V
Sbjct: 333 VYQMNQQFPSFHLEDKVNVEPRGIVRPPILHTYKRRDSKV 372

[Close]

BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5A7U9P7 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001430 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 1.50e-88
Identity = 128/160 (80.00%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKLR YRQRSLARKK EKLAP+YYGPYK+IEEIGA+ YRL LP EA+IHNVFHISQL
Sbjct: 132 EVYLKLRPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAMTYRLDLPPEAAIHNVFHISQL 191

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG Q+ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+ LP+SEATWES
Sbjct: 192 KPKLGAQKVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQSLPESEATWES 251

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+EDKVN+EPRGIVRPPI+HTY+RR + V
Sbjct: 252 VYQMNQQFPSFHLEDKVNVEPRGIVRPPILHTYRRRDRKV 291

[Close]

BLAST of Cucsat.G15699 vs. ExPASy TrEMBL
Match: A0A5D3C2K2 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00230 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 3.28e-88
Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   EVYLKLRLYRQRSLARKKCEKLAPKYYGPYKLIEEIGAVAYRLMLPLEASIHNVFHISQL 60
           EVYLKL+ YRQRSLARKK EKLAP+YYGPYK+IEEIGAVAYRL LP EA+IHNVFHISQL
Sbjct: 213 EVYLKLKPYRQRSLARKKSEKLAPRYYGPYKIIEEIGAVAYRLDLPPEAAIHNVFHISQL 272

Query: 61  KLKLGNQQAVQHQQPMLTEEFELQLWLEIVLGVRWNQELGGNEWLIKWKGLPDSEATWES 120
           K KLG QQ VQHQ PMLTE FELQLW E VLG+RWN+ELG NEWLIKW+GLP+S+ATWES
Sbjct: 273 KPKLGAQQVVQHQHPMLTENFELQLWPENVLGIRWNKELGANEWLIKWQGLPESDATWES 332

Query: 121 VFQMNQQFPDFHVEDKVNLEPRGIVRPPIIHTYKRRGKNV 160
           V+QMNQQFP FH+E KVN+EPRGIVRPPI+HTYKRR   V
Sbjct: 333 VYQMNQQFPSFHLEHKVNVEPRGIVRPPILHTYKRRDSKV 372

The following BLAST results are available for this feature:

BLAST of Cucsat.G15699 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15699 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737236.1	9.54e-109	93.33	uncharacterized protein LOC116402184 [Cucumis sativus] >XP_031744846.1 uncharact...	[more]
XP_031745420.1	4.92e-108	92.73	uncharacterized protein LOC116405633 [Cucumis sativus]	[more]
TYK29412.1	7.43e-94	81.60	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0044281.1	4.10e-91	80.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0040538.1	5.91e-89	81.88	Retrotransposable element Tf2 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G15699 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0H6	3.60e-94	81.60	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TRS1	1.99e-91	80.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TCB1	2.86e-89	81.88	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7U9P7	1.50e-88	80.00	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5D3C2K2	3.28e-88	81.25	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010376	Gamma-butyrobetaine hydroxylase-like, N-terminal	PFAM	PF06155	GBBH-like_N	coord: 5..80 e-value: 9.7E-21 score: 74.2
IPR038492	GBBH-like, N-terminal domain superfamily	GENE3D	3.30.2020.30		coord: 3..85 e-value: 1.2E-18 score: 69.1
None	No IPR available	PANTHER	PTHR35303:SF5	OS02G0197800 PROTEIN	coord: 5..111
None	No IPR available	PANTHER	PTHR35303	OS02G0197800 PROTEIN	coord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15699.T1	Cucsat.G15699.T1	mRNA
Cucsat.G15699.T4	Cucsat.G15699.T4	mRNA
Cucsat.G15699.T2	Cucsat.G15699.T2	mRNA
Cucsat.G15699.T3	Cucsat.G15699.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000976	transcription cis-regulatory region binding