Cucsat.G15673 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15673
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg2009: 5445549 .. 5446867 (+)
RNA-Seq Expression	Cucsat.G15673
Synteny	Cucsat.G15673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATGGTAAGCAATAGAAATGATTGGGAAGAAGTTTAATTAGAATCACTCATTTTAGAGAGATCCATTTTTAACCGATTTGGGTGTTAGTGATTTGTATGTTAGATTTGGAATGGAGGAGAGAAACAAAATTCCTCCATTTCCTTGTCGTTTTGGTTTCTTCGACTTCTCTCGATGGGTTGTGGCATTTCTAGGTTTGACCCTAAGGAGGTAGTCGAAGCAACGGCCAACGATTCCAATCACAATGATACTCCAAATCATTCCAATCACAAGTCCTATTCAACCTCCAATTGCTTCACCGGTGAATCCAAGCATATGAGTCACCAAGGACGTCCCCCTCCACCTGAGCCTCGTCATTCTTCTCCTGATCGAGCTGCACCCGGAGATCAAAAGATGATGAAGATGAAGACAAATGTCAAGCAAGAAGAATCAAGAGGGATTAATACTAATGGCCTAAAAATAAGGATGAGGATGAGGACAAGGACTAGAACTTCAACGCAAATTGATAATGATGATGATGATTCTAGCGATGAGGATTCTGATAAAAATGATCAAAATTGCCGTGAGATTTGTCGAGGAGGATCCCCAAGTTTCAGGGAATATTGCGTTGACTCTGAATCGAGATCAAGAAGCATGGGAAGTGAAGGTAGAGATCAAACTTCGGAAAATTATTATCGGAGATAACAAAAAGTTAGTTATCGTTACTTGATAAAAGAAAATTGCAAATTTGATGAAAGAAAAAAGAAAAATAATACTCTTGTTTGTTCTTTTAACATAAATTGGTTTTTATTTTACATAGATGACTGTGAAGGAGATCAGTGCAAGTGGGCACCAAAAGAGAAGGTATAAAATTTTATGAAAGTAATGTGTATGTTTCATTTTAAAACTTTATTAAGTCGAGAAGTTAGAGTTATATTTTTATAAAATGCATGGCAGTAATAATTGAGTATTATTAGTGTTTGAATAAATTGAAAATGAAAATTGTTGATAGAATTAAGAACAATAATATATTTGTTTGGGCAGGGAGTGGATAATGAAATAGGGAAGAAAGAAAGAAGAGGAAAAGGTTTAAGGAACGCATTACAACGTGGAATGACAAGTGGTGGAGTCAAGAATTTGTTAACTTCCTCTTCACGTCCTCAACAACACCACACCAATTTTTCTTCCCATTAACCTTTTGCAAAACCCTCTTCATTTCATTTCAATTTCCTACTCATCAATTCTTTTATTTGTTATTTATTTATTCTTTCAAATCTAAACATTTGTGTAAAACAATTTCACTTTTTAAATGCCTATAACCTCTCTTATTCTTTAGAAAA

Coding sequence (CDS)

ATGGGTTGTGGCATTTCTAGGTTTGACCCTAAGGAGGTAGTCGAAGCAACGGCCAACGATTCCAATCACAATGATACTCCAAATCATTCCAATCACAAGTCCTATTCAACCTCCAATTGCTTCACCGGTGAATCCAAGCATATGAGTCACCAAGGACGTCCCCCTCCACCTGAGCCTCGTCATTCTTCTCCTGATCGAGCTGCACCCGGAGATCAAAAGATGATGAAGATGAAGACAAATGTCAAGCAAGAAGAATCAAGAGGGATTAATACTAATGGCCTAAAAATAAGGATGAGGATGAGGACAAGGACTAGAACTTCAACGCAAATTGATAATGATGATGATGATTCTAGCGATGAGGATTCTGATAAAAATGATCAAAATTGCCGTGAGATTTGTCGAGGAGGATCCCCAAGTTTCAGGGAATATTGCGTTGACTCTGAATCGAGATCAAGAAGCATGGGAAGTGAAGGTAGAGATCAAACTTCGGAAAATTATTATCGGAGATAA

Protein sequence

MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPRHSSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDEDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSEGRDQTSENYYRR

Homology

[Close]

BLAST of Cucsat.G15673 vs. NCBI nr
Match: KAE8650764.1 (hypothetical protein Csa_017515 [Cucumis sativus])

HSP 1 Score: 329 bits (844), Expect = 1.39e-113
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60

Query: 61  HSSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE 120
           HSS DRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE
Sbjct: 61  HSSSDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE 120

Query: 121 DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSEGRDQTSENYYRR 169
           DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSEGRDQTSENYYRR
Sbjct: 121 DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSEGRDQTSENYYRR 169

[Close]

BLAST of Cucsat.G15673 vs. NCBI nr
Match: XP_011651546.1 (uncharacterized protein LOC105434913 [Cucumis sativus])

HSP 1 Score: 306 bits (785), Expect = 8.37e-104
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60

Query: 61  HSSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE 120
           HSS DRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE
Sbjct: 61  HSSSDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE 120

Query: 121 DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
           DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE
Sbjct: 121 DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157

[Close]

BLAST of Cucsat.G15673 vs. NCBI nr
Match: KAA0060297.1 (uncharacterized protein E6C27_scaffold22G00750 [Cucumis melo var. makuwa] >TYK22047.1 uncharacterized protein E5676_scaffold318G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 4.10e-63
Identity = 117/158 (74.05%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGISRFDPKEVVEATAN+SNH          SYSTSNCFTGESK + HQGR PPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANNSNHK--------SSYSTSNCFTGESKPLVHQGRLPPPEPR 60

Query: 61  HSSPDRAAPGDQKM-MKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSD 120
           HSSPDRAAPGDQKM MK+KTNV +EE++GI+      RMRMRT+TRTS Q DND+D   D
Sbjct: 61  HSSPDRAAPGDQKMTMKIKTNVMREEAKGIDNKD--PRMRMRTKTRTSMQFDNDED-FGD 120

Query: 121 EDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
           ++ D+NDQNCREICRGGSPSFREYCV SESRSR MGSE
Sbjct: 121 DNIDQNDQNCREICRGGSPSFREYCVGSESRSR-MGSE 146

[Close]

BLAST of Cucsat.G15673 vs. NCBI nr
Match: XP_038877410.1 (uncharacterized protein LOC120069699 [Benincasa hispida])

HSP 1 Score: 138 bits (347), Expect = 3.33e-37
Identity = 95/158 (60.13%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHK-SYSTSNCFTGESKHMSHQGRPPPPEP 60
           MGCGISR DPKEVVEAT N S HN  P H N+K SYSTSNCFTGESK   HQ   PP  P
Sbjct: 1   MGCGISRLDPKEVVEATTNCS-HN--PPHPNNKFSYSTSNCFTGESKPWVHQ-HGPPSVP 60

Query: 61  RHSSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSD 120
             SSPD  AP ++K+MKMK +VK+ ES+ +  +      +M   TRT  +    DD S  
Sbjct: 61  DRSSPDWEAP-EEKIMKMKMDVKRGESKEMINDS-----KMAKGTRTQFE----DDCSDG 120

Query: 121 EDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
           +D D ND N REICRGGSPSFREYC+DSESRSRSM SE
Sbjct: 121 DDGDGNDGNGREICRGGSPSFREYCIDSESRSRSMASE 144

[Close]

BLAST of Cucsat.G15673 vs. NCBI nr
Match: KAG6581119.1 (hypothetical protein SDJN03_21121, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017852.1 hypothetical protein SDJN02_19718, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100 bits (248), Expect = 4.64e-23
Identity = 74/160 (46.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGIS+F+PKEVVEAT  D  HN   +H +    ST+NCFTGE K    +G     + R
Sbjct: 1   MGCGISKFEPKEVVEATT-DCPHNPPRSHKS----STTNCFTGEPKPSVQEGSSTEKQSR 60

Query: 61  H---SSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDS 120
               SS DR   G+ KM+KM  NVK+E+    +        +M TRT+ + +  NDD   
Sbjct: 61  KGNGSSRDREVAGE-KMVKMSVNVKREKVEEDDR-------QMETRTQINFEDPNDD--- 120

Query: 121 SDEDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
                    QN R+I RGGSPSFREYC+ S+SRSRS+GSE
Sbjct: 121 ---------QNYRKIFRGGSPSFREYCIGSKSRSRSIGSE 135

[Close]

BLAST of Cucsat.G15673 vs. ExPASy TrEMBL
Match: A0A0A0L883 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G560250 PE=4 SV=1)

HSP 1 Score: 306 bits (785), Expect = 4.05e-104
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60

Query: 61  HSSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE 120
           HSS DRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE
Sbjct: 61  HSSSDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSDE 120

Query: 121 DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
           DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE
Sbjct: 121 DSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157

[Close]

BLAST of Cucsat.G15673 vs. ExPASy TrEMBL
Match: A0A5D3DEE4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00240 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.99e-63
Identity = 117/158 (74.05%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGISRFDPKEVVEATAN+SNH          SYSTSNCFTGESK + HQGR PPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANNSNHK--------SSYSTSNCFTGESKPLVHQGRLPPPEPR 60

Query: 61  HSSPDRAAPGDQKM-MKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSD 120
           HSSPDRAAPGDQKM MK+KTNV +EE++GI+      RMRMRT+TRTS Q DND+D   D
Sbjct: 61  HSSPDRAAPGDQKMTMKIKTNVMREEAKGIDNKD--PRMRMRTKTRTSMQFDNDED-FGD 120

Query: 121 EDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
           ++ D+NDQNCREICRGGSPSFREYCV SESRSR MGSE
Sbjct: 121 DNIDQNDQNCREICRGGSPSFREYCVGSESRSR-MGSE 146

[Close]

BLAST of Cucsat.G15673 vs. ExPASy TrEMBL
Match: A0A6J1F405 (uncharacterized protein LOC111442180 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442180 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.33e-22
Identity = 74/160 (46.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGIS+F+PKEVVEATA D  HN   +H +    ST+NCFT E K    +G     + R
Sbjct: 1   MGCGISKFEPKEVVEATA-DCPHNPPRSHKS----STTNCFTSEPKPSVQEGSSTEKQSR 60

Query: 61  H---SSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDS 120
               SS DR   G+ KM+KM  NVK+E+    +        +M TRT+ + +  NDD   
Sbjct: 61  KGNGSSRDREVAGE-KMVKMSVNVKREKVEEDDR-------QMETRTQINFEDPNDD--- 120

Query: 121 SDEDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
                    QN R+I RGGSPSFREYC+ S+SRSRS+GSE
Sbjct: 121 ---------QNYRKIFRGGSPSFREYCIGSKSRSRSIGSE 135

[Close]

BLAST of Cucsat.G15673 vs. ExPASy TrEMBL
Match: A0A6J1FA30 (uncharacterized protein LOC111442180 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442180 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.36e-22
Identity = 74/160 (46.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGIS+F+PKEVVEATA D  HN   +H +    ST+NCFT E K    +G     + R
Sbjct: 1   MGCGISKFEPKEVVEATA-DCPHNPPRSHKS----STTNCFTSEPKPSVQEGSSTEKQSR 60

Query: 61  H---SSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDS 120
               SS DR   G+ KM+KM  NVK+E+    +        +M TRT+ + +  NDD   
Sbjct: 61  KGNGSSRDREVAGE-KMVKMSVNVKREKVEEDDR-------QMETRTQINFEDPNDD--- 120

Query: 121 SDEDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
                    QN R+I RGGSPSFREYC+ S+SRSRS+GSE
Sbjct: 121 ---------QNYRKIFRGGSPSFREYCIGSKSRSRSIGSE 135

[Close]

BLAST of Cucsat.G15673 vs. ExPASy TrEMBL
Match: A0A6J1J2G0 (uncharacterized protein LOC111482081 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482081 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.04e-21
Identity = 73/160 (45.62%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60
           MGCGIS+F+PKEVVEA AN   HN   +H +    ST+NCFT E K    +G     + R
Sbjct: 1   MGCGISKFEPKEVVEAIAN-CPHNPPRSHKS----STTNCFTSEPKPSVQEGSSSEKQSR 60

Query: 61  H---SSPDRAAPGDQKMMKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDS 120
               SS DR   G+ KM+KM  NVK+E+    +        +M TRT+ + +  NDD   
Sbjct: 61  KGDGSSWDREVAGE-KMVKMSVNVKREKVEEDDR-------QMETRTQINFEDPNDD--- 120

Query: 121 SDEDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157
                    QN R+I RGGSPSFREYC+ S+SRSRS+GSE
Sbjct: 121 ---------QNYRKIFRGGSPSFREYCIGSKSRSRSIGSE 135

The following BLAST results are available for this feature:

BLAST of Cucsat.G15673 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15673 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650764.1	1.39e-113	99.41	hypothetical protein Csa_017515 [Cucumis sativus]	[more]
XP_011651546.1	8.37e-104	99.36	uncharacterized protein LOC105434913 [Cucumis sativus]	[more]
KAA0060297.1	4.10e-63	74.05	uncharacterized protein E6C27_scaffold22G00750 [Cucumis melo var. makuwa] >TYK22...	[more]
XP_038877410.1	3.33e-37	60.13	uncharacterized protein LOC120069699 [Benincasa hispida]	[more]
KAG6581119.1	4.64e-23	46.25	hypothetical protein SDJN03_21121, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cucsat.G15673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L883	4.05e-104	99.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G560250 PE=4 SV=1	[more]
A0A5D3DEE4	1.99e-63	74.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F405	1.33e-22	46.25	uncharacterized protein LOC111442180 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FA30	1.36e-22	46.25	uncharacterized protein LOC111442180 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J2G0	2.04e-21	45.63	uncharacterized protein LOC111482081 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15673.T1	Cucsat.G15673.T1	mRNA
Cucsat.G15673.T2	Cucsat.G15673.T2	mRNA