Cucsat.G15663 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15663
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	flowering time control protein FCA
Location	ctg2009: 5107235 .. 5119753 (+)
RNA-Seq Expression	Cucsat.G15663
Synteny	Cucsat.G15663

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGCACCACCCCCAGCCCCAGCCCCCGCCCCCGCCCCGCCACCTCACCAGCACCCCTACCAGCATCAGCATCAGCACCAGCACCAGCACAATAACTGGAACCATCCGGAGTTCCACAATCATCCCCCGGACTACCGTCCCCAGCCGCACTTTAACGGCGAGATGACTGAGGGGTTCGGAAACGGGGGTTTGAGGCCCAATTGTGGGAATCCAAATCCAATTTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGGTATTTCATTTTTTTAATTAATCATGTAGCGTACAACATAGCTATGTTGTTGGTTTATAAAACAAATATATTTTGACACCAATATATCTCGTTGCCCTGCTTACAGTTCCCTGCTGGATCATGAACTGAACTTAAAGATTTATCTTTTAGACTGTTAAATAGATAATCTGACTCTAATTTTTCTCTATATTGGCCATTTTCAAAATTTGAAGTTTGTCGTTAACACTATATTTGTTAATACATTCCTTTTCCTTTGATTATCCCTCGTTTCTGTTTGGTTGCGTTTGGATTTTATTTGTTTATTATTTTCTTTTTTCAACTTTTCTTCAAGTATTCCAACATTTTTTTTCAATAAAGTTGAGATCTACTTCAAGAACATTAGATTGCTCTTTTAACTGCCTAACAGTTAACATGAGGCACAGGGAATTAGAGAAACTTTTACTACAAAAACTATCCGATGTTGCTTTTCTTTGGAGCAATTTGTTACTCCATAATGGATGTCATTGAGATGGTTTTTTTGTTTATTTATTCTCTTCCAGATCATGCTGAGGCTAGTGGTCATGTGAAATTGTATGTTGCACAAGTTCCTCGAACAGGAACTGAAGAAGCTGTAAGTTTTAATTTCCATGCTTTGCCAACTCATATAACCTTGTAGGCGAAAGAGTTCTATGGGAAGGAAGATTCATGGTCTTATATCATGTCACTGATCTTGGTTCCATCTTTTAGTTATCTTTTGGGATTTTCTTAATTTTTAGGCTTATATACTTTTTTTTTTCCTTAAACGGAAACAAAACTTCTCATTGATAAACGGAAAGAATTTGTCTCGAGTTATAATGAGACATAATAAGCACAGGAAACCCAAAAACCAAGCATTGATTAGTGCACCTAGATATCTTGACTAGGTTGACACACCCATAGCACCCTCATCATATCCCAATACAAAATATAACTATTTAGGAATTACAAAATGTCATTACGATATGATTACACAGGAGAAATAAAAGTATTGAAAGCAATAAACACGAAACCAAAGCTTACGTGGAAACCCGAGAACCGGGAGAAAAACCACGATGTTTTTAGTTTTATTATTTTCTAATAATAACAATGGTACAAATGAGGGAACTTAAATATAATGTAAAAAGCAAAGAAGAAAAGGAAAAGAAATATTTATGGTAAGTTTTCCATAAATATTTTTTTTATATATACAAATTCTAACACTCCCCCTCAAGTTGGAACGTAAATATCAATGAGGCCCAACTTGCTAACACAAAAATCAAAGTTTGGCCTGAGAAGCCCCTTGGTGAGAACATTAACAACCTGTTGGCTAGAAGGGATGTACGGAATGCATATGCTTCCGCTGTCAAGTCTTTCTTTGGTGAAATGCCAATCAATCTCAACATGTTTAGTTCTAATTTCTATCATGTTGAACTGGGTTGTTAGCAATACTAATAGCGGCTTTATTATCACAAAAGAGTTTTAATGGAGTCTCACATTCCTGATGAAGATCAAAGAGGACTTTCTGGAGCCAAATTTCCTCACATATTCCCAAACTCATAGCTTTGTATTCGGCCTCAACACTGCTCCTGGCCACAACACTTTGCTTCTTACTCCTCCAAGTTACAAGATTGCCCTAAATAAAGGTACAATAACTAGAGGTAGACTTTCTGTCAACAACAGATCCTGTCCAATCCGAGTCGGTATATGCCTCAATGGTCTTTCTGTTTGTTTTTCTAAACATCAACCCTTTACCAGGTGTTGTTTTCAAGTGTCTCAGAATTCTATTGACAGGTTACATGTGTTTAACATCAACCCTTTACCAGGTGTTGTTTTCAAGTGTCTCAGAATTCTATTGACAGGTTACATGTGTTTAACATCAACCCTTTACCAGGTGTTGTTTTCAAGTGTCTCAGAATTCTATTGGACAGGTTACATGTGTTTCTCATAAGGAACTTGCATAAACTGGCCGACGACACTCACAACAAAGGAAATATCAGGACTATGGGATAAGTAAATCAATTTACCCACAAGGCGTTGATATTGTTCTTTATCAAGTGGAACTTGATCATCAGAGTTTCCAAATTTACAATTGAACTCAATAAGAGTATTAGCAGGACGACATCCCAACATACCTGTCTCGGTTAGCAAATCAAGGGTGTATTTTCTTTGAGACACGGGATACCTTCTTTAGATCTAGCTCTTTAGATCTAGCCACCTCCATTCCAAGGAAATATTTCAGATTTTCCAAATCTTTGATTTCAAATCATCACCCATTCTCTGCTTTAGTTGACTGATTTTTGCCTGATCATCTCCAGTTAAAACAATGTCATCCAGATAAACTAATTAGAACAACAACCTTCCCTGTCTTGGAAACCTTTGTAAATAAAATATGATAAGAGTGTCCCTGACTGTATTCTTGGGACTTGACAAAGGTAGTGAATCTGTCAAACCATGCTCTAGGAGACTGTTTCAAACCATATAGGGGTTTTTGGAGTTTACACACATGCTGACCAAACTAGGCTTCAAATCCAGGCGGGGTGGGGGCTAATGTAAACTTCCTCCTCTCCATTCAGACAGATATTCTTAACATCCAGCTGGTAGAGAGGCCAATCTTTGTTCACATCAACAGATAACAAGACTCTAACACTATTCAACTTAGCAACTGGAGGAAAAGTTTTTGAGTAGTCAATTTCATAGGTTTGAGTAAATCTCTTTGCAACTAACCTTCCCTTGTGTCTGTCAAGAGTATCATCTGCTTTGTATTTGAGAGAGAACACTCATTTGCATCCCACAATTTTGTGTCCCTTGGGTAGAGCACAAATTTTCCAAGTTCTATTCTTTTCAAGAGCCTTCATTTCTTCCATGATTGCATTCTTCCATTAAGGACACTCTAAAGCAATGTAAATATTTTTCGGTATTATGGTAGAGTCAAGACTTGCTGTAAAAGCTCTGAACTGTGGAGAGAGATTGTCATAGGAAACATAGTTGCAAATGAGATGTTTAGTACAAGACCTGGTACATTTTCTCAGAGCAATGGGAATGTTAAGAGAGGGATCATATTCATCAAGTTTCCCTGTATGACCTTGTTCAGCTTTATTACTACCGGTTTCTGTCTCAATCTCATCACCACTGTTCTTTTCTTCCACACTTTCAAGAACAACAACATCAGATTTGTCATTCTCACTTATCGTATTATTAGTACAAGGTTCAGTAGAGTTTTCCATACCTTGATCTCAAGGAGGTTCAGAGTCTTGGATTGGAGCCGGTGGCTGACTAGTAGGGGACCTGACTTCCTTTTTGAGATTCCTCTTGTATTACGTTTTCCAAGGAACTTGGTTTGTGGGTAGGACTATGAGATGGGGATCGATGTCAGACACAATACTAGGAGTAGGTTCGATAAATTCAAAGGTGCTGTTAGACTCTTCACTCACATTCTGCCCCTGAATATAGCTAACGGGAAAGTAACATCCATAGTGACAAAGTATTTCCTGGACGACAGGTGAAAACATTTATAACCATGCTGGTGAAAGGGATACCCAACAAACACAAATGTCTGAGCTCGATGGGTAAATTTGGTCTGATTAGGGCCAAAATTATGGACATAAGTGGTACTTAAACACACGAAGAAGAACCTCAGAAATAAAACGAGTAGAGGGGTAGGATTCCTTAAGACAATCTAAGGGAGTTTGAAGGTGGAGAATTCGAGAATGCGTTCTATTGATTAAATGAGCTGCTGTAAGAATAGCATCTCCTCACAAGTATGAAGGAAGGGAAGTTGATAGCATAAGGGAACGGGCTACTTCCAGAAGGTGACAGTTTTTTCGCTTGGCCACTTCATTTTGTTAAGGAGTGTAGGTGCATGAGTTTTGGTGAACAATCTCCTTAGAGGCTAGAAATTCACTAAGGTTATGGTTTTGGAATTCTCGGCCATTATCACTCCGAAGAATAGCAATTTTTTTTATGGAATTGAGTTTCAATGGTGTGATAGAAGTTTTGGAAAATAGAGGAAACCTCCAATTTATTGGTGATAAGGTAGACCCAGGTAAGACAGGTATGATCAACAATGAAAATTACAAACCACCGTTTCCCAGATGAGATGGTGACCTTGGAGGGACCCCAAATATCACTATGGATAAGGGTAAACGGTTGTGTGGGTTTATATGGTTGTGAGGGAAAAGAAACCTGATGTTGTTTTGTCCAAATTCACACATCACAAGATAACGAGGAGACATTGATTTTAGGAAAAAGACGGGGAAACAAATATTTTATATAAGTAAAGTTCGGGTGACCCAACCAAAAATGCCACAACATAAAGTCATGTTCAGAAGTGCTAAAATAGGAAGATAGTAAACTAGTCCTAGAGATACTACTACTGGAGGTATCATCATCAAGGATGTAAAGTCCCCTGCTATGCCGGGTAGTGCCAATCGTCCTCCCAGAACTCAAGTCCTGAAAACAAACAGATTCAGGTAAGAAAGTAGCTTTATAGTGCAGCTCACGGGTGATCTTACTGATAGATAACAAATTGTAAGAAAGCTTAGGCACATGAAAAACATTATGGAGAGAGAAATCGTCAAAGAGAACTATTTGTCCTTTGCCAACAATCGGGGCTAAAGAACCATCTGGTATCTTGATTTTCTCATTACCGACACAGGGTATAAGAGACAAAGTGCTCCGAAGAACCTGTCAAGTGATTTGTGGCCCCCAAGTCCAAAATCCAGGGATTCTTCCCATCAGCACTAATAAGACCGAGGGACTGAGACATACTTGACTGAGCAATGACACCTAGGGTAGGAGGGTCGGTCTGGCTAGTAGTAGGGCCGGTTGACTAATAGGTATTGGCAATCTCCCTAACATCGGTACGTCCTGAGTGCTTGTTGGAGGAACTTTTGTTACCTCTTGGGGGTCGACCGGGGAGTTTCCAACACTGATCCTTGGTGTGCCATTGTTTCTTGCAGTGCTCACATACGAGACTTGGTTTTCCACTATTCTTCTCATTATTGTGGGTTGAGAATTGAGCACTAAGGGCAACAGAGTTAGTTATATAATTATAAGGTACATTAGGGAGCGAAGTTACCGGGTTCTTTGAATACATCAGTAGATTGATCGATTTAGAGGATGCACCAACTTCAAAAACAACTCTGTTGTAGGTTTGGTTAATCGCAGGACCACAAACATATGGTTGTCCAAGACCGGAGGGTGCCAATGACTCGCTCGCTTCAATCCCCGATCTGTTATGAAGTTGGTCAGCCCCGTTCCCGTAGAAGAAAGATTGCCGTAAAGGGTCGACGGACAGATTTGCATTGCTGTACAAATTTGACAGTTTTGAAGGTTTCTGTCTGACGACAATGGGTGGCCCGTGCGGCTGTGGATGACCGGAAGGGTGAAACGGTTGGATAGGCGACGACGCATAGAGGTGGATGGGATGGGCGGTGAGATGAACGGACGGCAATGCGTGGGCCCACGCGCCTGACAGAAGTGGCGTGTGCGGTGGTTTCTGGTCAGAATATTGCGCCGACGGTGGCGAGGGTTGACCCACTGTGTAGATCGGCGCCTTTTGAATCCGGTGGAGTAGTTTTTCCATGGTGGTGTCCACGGCGGCGGCGACAACGGTAACGTCTGTTTTGGTCAGGGTGTTTTCTAAATTTTTTCTTAGGGTTTTGTTGTTGCTGTGCTCTGATACTATATTGAAAGCAATAAACACGAAACCAAGGCTTACGTGGAAACCCGAGAACCGGAAGAAAAACCACGATGTTTTTAGTTTTATTATTTTCTGATAATAACAATGGTACAAATGAGGGAACTTAAATAGAATGTAAAGAGCAAAGAAGAAAAGGAAAAGAAATATTTATGGTAAATTTTCCATAAATATCTTTTCCATATATACAAATTCTAACAAAAAGCATTCAAGTTAAGACAAATATACCAAGAAGAAGCTAGCAGACGAGCTGAGCCAAAACAATCAGACCAATTGATGGACTTGCCATGGAAAACTCTCTTGTCGCGTTCAAACCACATTTGTAGGCTTATGCACAATACTTTATGACCATTGTCTTGCATTTGGGAGTCTTGGAGAGGCTTTTGTAACTAAGTAACAATGGTTGTACCATTTCACAAATTTGAATGGAATGTTTCTGTGAACTTCAAATCATTCAAAAGTTCCAACACACGTAAATTCTTGCCAAAAAACTAGAATACTTAAAATTGACTTTTTATTTCCGTTGATAACCTTCAAAATCAAGATCCAACAGAGAAGATGGTGTTTTATACTTGTTTTTGTTCTTTGTATTTTGTTTCTTCAAAAACCTTCAAAATCAAACTTCTAAATGTTTGCTAATCCACGTTACTTTATTCATTTTATTTCTCCCTTGTATTAAAGTCATCTACAATTCTTAAAGTCATAATTTAACATTATTGACGGCTTAAATCTTTGGTATCAGATACGTCCTTTGTTTGAAGTACATGGAGATATTGTTGAGATTGTAATATTAAGGGATAAGATAACTGGCCAACAACAAGGTATTTTGTTCATTTTAAGTTTAATTCCATTTTATTGTTCTGCTGTTTGGGTTGACTAGAGTATTATCAGCTCACTTTGATCTTCATACTTCTGGAGTACGGCTGCAAAATTGACATGTTCTTGTTTATTTGAAGATTTTCTTCCACGGAGTGTTCAGGAGTGAAAATTGAGTTTGATGAGAGGCCCTTGTCTATTGGAGAACATCCCCTTTTCAAAGAAAATTCTATTTTATTGAATCACTGTCATCTTATTCCTTCTAAATTTCTTAATAACACTTGTCAGTTCTTATATATGATTAAGACCTGCTGTGGCCGTTTTCTTTAAAATAAAATTTTATTGCGCTGTTGCATCAAGTTGACCATGCTTCTTTTACAGATATTATCTTTAATTGGAGTTCGTTGACTGAAGTATCATTTTTAAATGACAGCTTCGATATATATGAATAGTCTCTAACGTTAATATCCAAATGGATTATGGTTAATGTGTTTGTCTTTATGCTGTCATTCATAAGAATAATCTAAAAGCACATCCATGATTTTCTCTTCAGGCAGTTGTTTTGTGAAATACTCTACCTCCGTTGAAGCAGACAGGGCAATCAGAGCTTTGGACAACCAATATACTTTTCCTGGAGTGAGTTATGAAGCACTTTTGTTCTTATTTTGGAAGTTTGTTTCCTATCAAAATAAATCAATAAATGACTAACAAGTCACTTTTTACTGTTTCTGATAATATTTAGGTAACTCAATTGATGTCATAATAACTTTTCTAACTATACTTTCTTTATAAAAGACTTTTCTTACTAGTCTTTAATATCAGGAACTGACCCCCATCAATGTAAAATATGCTGACAGTGAAAAGGACCGCCTGGGTAAGTTTCTGGTATTCTGGACTTCCTGTTGCTTCACTTTGACGTATTTTTCCTTTAGGCATTCTGTATCGTTTGTATCTTAACAAGGTTATTTTAGTTTACAAAGCAGTAGTTGAGCATTTTTTCTCTACTGAGTTCTTGCATTATGTGTTTTGAGCTTTGCATGACCAAGCTGCACATTATTCTGATTGTTTCCCGTAAGAGGGAACCCCTTAATCAATTATCTCATGATTTTGCCCCTTTCAAATTTTTTTATTTTTATGTTTTATGTAGGAGTACTTGAAAAATTATATGTTGGTTGCTTGAATAAAAATACTACAAAAAAGGGAAATTGAGGAGGTAAGTAAGCAATATTCTTCACATTTACACAACATAGAGTTATTTTTTTAAAAGAAACATTGCACTTTTGGTTCTGAGATTTTAATCTGAATACTTGAATAATTTTATATTTTGAGGTTTTGGAAAATTACTGAAAGAATCCGCATCATCAACTCTTGTTAACTACATTGGTGCAAAGATGATTTTAAATTAAGATATATTGTTTTTAAGGAAAGTGTGAAAATATTTAATTAAGTTTGTATTCTCTTTTCCGGTCAAATGGTCGTTAAGTTACCCCATAATTAGTAGTTCACTAAAATTTGGCTAACCAAATTAAACATTATATTTTATTAATTTAAACAAATAATTAAACACAAGTAAATTTTAAAAAATCCACACAATTATACACAGATTAATAGAAAATCATCCATGTTCTTTGCCTTGAACTTTTCCCCATGGCTGCATAAGTCATAAGATTAAATGGTTTTGAGTTCATGTGTTCAAATCATGGTGGTTGCCTCCCTAGGATAATAAATAGTTGGGGCGTTTCATGATCTCCACTCATAGTTCTTCAGAATTGGTGTTCCCTCTAGGTGTTCACGAACTTGTTCAGTTCTCCTTATTATCTTCCCTCAGTATGGATTTGGTTTGTGCGTTGGCTATTGTGTGTTGTGTGACATCTGAAGGTGTCGGGCATGTTATAGGAAGGTGCAAAATTTTTTTGTAGGACTAGGGAAAACAATTGATGTGTTATTTTTTCATTGCTATAAAGCCTATGGATGATAGGTTGAGGAAATCACCAAATAAATGAGGCTAGAAAAGTAGTTTTTATTTTATTTTATTGTGTTATTTATTAATCTTTGCCATTTTTTCAATTAAGAATTTTTTGTGAACATTTCATCTGTCAGGTATTCTCACCTTATGGTTTTGTTGAGGATATTTACATCATACGTGATGACCTGAAGCAAAGCCGAGGTGTGTAAAATTTTCTTCTATTGAAATTTATTGAGAAAAATTTTAAATAGGTTTTGTACTTATCATGAAAGTTATTCTCAAAAGTTTTTAGTTTTCAATGTACAGTATTAAACCTTGTCAAGCCCATCCGTTATTTCTTTATGACACAAACTTGTACAGGATAAAATCACGAACAGATCATTGTAGAGTAAAATCTTTATTCTGATGGATAAAGTACTTATAGAATCATATTGTGTCGGAAAATCAGTTGGAATTGAAACATTATTTCTCCCATGTTTTACTGATCAGCCATTTAGGCTTTTAATTTCTTCTCTCGATTGCAAAGTTCACTTTAATTTTGGGCCAGACTCTCAATTTATGTTTCTGATTTTGACGCTCATGTTCTTATCAAGGATCTGCCTTTGTAAAGTATGCTCGAAGAGATATGGCATTGGCAGCAATCAAAGCATTGAATGGAAATTTTACGATGAGAGTAGGGCTTGTCTATATAATCTCATATATTCTCTGGTGTGTGAATTGCTCTTCTAAGCTTAATATTGGTTTCATGTTTCTTTCTACATCACTAGGGTTGTGATCAGCCATTGATTGTTCGTCTGGCAGACCCTAAGAAACCCAGGATTGGTGAACAAAGGTTCAGCCTAATACATTACTATTTCCTTATATCTATTATATATATGAAGTATAGTCTCTTGTTACTGATTGCTCATCTGTCGTATTGTAACCATGAATCATGATAATATCTAATGTACCTTAGACTCTTGCTTCTTGCATCACCAAATAACTATCTCTAAATCTTTAGAGCGCTATGAAACCAAGGGAGTGTAAAGTATATAATATTACATATCATGTGTGAGAGAGAGAGAGTGCAAGGAAATGTAGGAACCAACTCCCCTGATTCTTGTATGCGCTCCTCCCTAATGTAAGAAGAATAGAGGTTAATTGGGTAATATTCTAGATTGATTTCCTTTTAACCCCCATTTGTAATAGAACTCTACAAAATAGGAGTCTTCCTCTCTTCTATGAAACAATCATTATCACTTTGATAAAAGAGGCACAAGATCGATTCTTGGAAGATTATTCCTTGAGAATACTTAGACTACATCATCCCCATGTTCGCTTCCTCCCAACTTGAAGGTTGTTTCTTTTAAGAAAATGGAAAGATGGAAACCAAAATGAGTAGTTCTATTAAAAGACTTGATGCTATGCTCTAGCCTACTACCGATGATATACCCTGTTTCCTTGTTTGAAAGTGAGGACACCTCTAGATGGGATGGATATTTGTTGAATTTGAACTACTGTGATGTGAGCTAACAATAATTAGTTTTTATATTGCATGCCATTATGCATTTATATTTCATAAATGTGTTGGACAAACATTTTGACCATACATATATTTGCATGATAGCATATATAGCATAGTTTGTTTTATGCTTATTTTCTTATTGTTGTGTCAATGTTCAATTGTTAAATATATATATCTCTACACAGAAGCACCAACGTATCAGGAAGCCCGAGATTTGGTCATCATCCTCAACCATTTAGGTAATAGCGTAATTGTTTCGTTTTTGTCTAATTTATAACATAAACTGTTTTCTTAATGGTTTAAACTTCTCTAGACCTGAGCCTCCTGTTGGTCCAGCTGGAGGGTGTTTTCCCAATAATTCATACCCGGGACAACAAAATTCTACAAGTTTAGGACCACCAAGGAATGCTTCCCAAGTGGCATCCCATACCCCTTTTGCTCCGAATAGCATGCAGAAACCATCTCCTCAAACACAGGAACCGTCATCATCTTTTGCTCAAATGTCATCACAACCAATGAGGTCAACACAGCAAGTTTTTCAGCCTCCTACACAGACTGATTTTTCTAAGATGCAGAATCAGGTGCTTGGTCAACAGCCCCGGCAAGATTCACATCAGCAGCAAAATTTACAGGTTCGTGAGAATACGGTGTGAAGACGATTTGAATTATAGTCTTTGTAATAGCTGTCAAATTACATTAAAGTAAAAGATAATATCATGATTGGCATCCTAATTCTATTCCAGGAGCTGTAAAACAAATGCTGAAACTTGTCTGTACGGATAATTACTAAAGAGGTCGTTTATTGCCATATTGTCATTAACTTGTGTGTGTATTCTCTTCTATGTTTTTTGTGCAGCCTCCTTCTGCACGTGGTGTTCAGACCTTTAGTGGTACTCCCAACTCACCTATGGGGCGTCCAAGCTCTTGGGTAGAAGTTACTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAACTGTGTCACCTATGAAAGCTTGGTAAGTACTTTATGTTGTCATCCATCCGTCTTGCAATAGTTGTTTCCAATTTTGTGGTGCAATTTATGATAGATACCTTTGAAAATTGGTTCTTAGTGGGAAAAGCCAGAAGAGTTTGCCTTGTTTGAGCAACAACTAAAGGAGGAAAAGCTTCAAAAACCAAACCATCAGCTTCATTCTTCATTATCGGGTGTCTCTTCTCAAGAAGTGCTGCCTCAGCCAAATCTTTTGAGTCAAAAACTTGAAGCTCAATATTCCTCAGCTGTACGGGTTAGTATTCATTCATACACATACATATTCGTATATCTTCTCTTGTATTCACTATCTTTTCGAGTTATATTTTTGTTAAGCTATTCAATTATATTAGGTTGATGCTAGGTGGTACATAAAATCTTCGCTTAACCGTAAATAAACCAGGTCTGAGAGTGATTTTGAAATGACTAAAATGACTTTTATCCTCAAAACCAATTCTGATTTTAATTAAACAATAAATTGATTTGAATTTGAAACTTGTTGTAATGATTTTAATTATTTCAAAAACACTCCCGTACAAGCTTAAATAATACAGCTTGAGAATTCATTTTCAGGATTTCAGTTTTCTCTAATTCTTTAATATGCTCAAATTCTGCAGGAGTTGGATTGTATGCGACTTCAATCAAAAGCAAGTCCTGTTGTTAGTCCAGCGTGTGTTTAACAGTGTCAAAGTTATAGGAAGGTTGTTCAAGACATTTTGAAGTTTATCATGTTGGCAACTAACATTGAGACTTTAATGTCTAGTAAATACACTGAGTTAGGATGGTAACAAAGACTTCATGTTAGCTGCTTGACTCGTAGCCAAGACAGTTTTTGAATTGCTCGTGTAAAGCTGGTGTACTATATAGTCTACTGGTTATCTCAATGGTCCTGCTCCTGTTGGTGTAATTATATATATGAAGGGATAGGGCAGAGCTTGCATGTGCTTCCATGGAGTTGCTGCTCTAAACGGTAATTAATGTGCTATGCTTTAAAAACTGTAGTTCTACCTCCTTTAATCCATTCAATACTTGCATTAACACATAGATGCCAGTAGATTCTTTATTATTTTATTTTAATTTTCCTGCTTTATGTTTGTTTTGTAATCGACTTTGAAGATGTTCGAAATTATATTGGAACAGCGATAAGGTTGATTATAGTTTTAAATTATTTTCATGGGATTCTTCTTGAATGAGGAATCCCTTAAGGTGATCAGGATTAAGTGTAAAATTTATTAGTTATCTTGTATCAATTTTTTATGTATCGAGTACTTTGCAGTTAATCCTTGATTTTATTCGGAATGTTTTGAATTACATTTTCCTATCTTCTAGACACTTGGACTTTATACCTTCATCTTCTTTGAAGCATTATAAAGGGGATTCAAAGACATT

Coding sequence (CDS)

ATGGCATTGGCAGCAATCAAAGCATTGAATGGAAATTTTACGATGAGAGGTTGTGATCAGCCATTGATTGTTCGTCTGGCAGACCCTAAGAAACCCAGGATTGGTGAACAAAGAAGCACCAACGTATCAGGAAGCCCGAGATTTGGTCATCATCCTCAACCATTTAGACCTGAGCCTCCTGTTGGTCCAGCTGGAGGGTGTTTTCCCAATAATTCATACCCGGGACAACAAAATTCTACAAGTTTAGGACCACCAAGGAATGCTTCCCAAGTGGCATCCCATACCCCTTTTGCTCCGAATAGCATGCAGAAACCATCTCCTCAAACACAGGAACCGTCATCATCTTTTGCTCAAATGTCATCACAACCAATGAGGTCAACACAGCAAGTTTTTCAGCCTCCTACACAGACTGATTTTTCTAAGATGCAGAATCAGGTGCTTGGTCAACAGCCCCGGCAAGATTCACATCAGCAGCAAAATTTACAGCCTCCTTCTGCACGTGGTGTTCAGACCTTTAGTGGTACTCCCAACTCACCTATGGGGCGTCCAAGCTCTTGGGTAGAAGTTACTTTGGAGTGTGATTGGAGTGAACACACCTGCCCAGACGGTTTCAAATACTATTATAACTGTGTCACCTATGAAAGCTTGTGGGAAAAGCCAGAAGAGTTTGCCTTGTTTGAGCAACAACTAAAGGAGGAAAAGCTTCAAAAACCAAACCATCAGCTTCATTCTTCATTATCGGGTGTCTCTTCTCAAGAAGTGCTGCCTCAGCCAAATCTTTTGAGTCAAAAACTTGAAGCTCAATATTCCTCAGCTGTACGGGAGTTGGATTGTATGCGACTTCAATCAAAAGCAAGTCCTGTTGTTAGTCCAGCGTGTGTTTAA

Protein sequence

MALAAIKALNGNFTMRGCDQPLIVRLADPKKPRIGEQRSTNVSGSPRFGHHPQPFRPEPPVGPAGGCFPNNSYPGQQNSTSLGPPRNASQVASHTPFAPNSMQKPSPQTQEPSSSFAQMSSQPMRSTQQVFQPPTQTDFSKMQNQVLGQQPRQDSHQQQNLQPPSARGVQTFSGTPNSPMGRPSSWVEVTLECDWSEHTCPDGFKYYYNCVTYESLWEKPEEFALFEQQLKEEKLQKPNHQLHSSLSGVSSQEVLPQPNLLSQKLEAQYSSAVRELDCMRLQSKASPVVSPACV

Homology

[Close]

BLAST of Cucsat.G15663 vs. ExPASy Swiss-Prot
Match: B8BCZ8 (Flowering time control protein FCA OS=Oryza sativa subsp. indica OX=39946 GN=FCA PE=3 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 76/146 (52.05%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 52  GNGGLRPNCGNPNPILGR-KRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPL 111
           G GG R   G      G   R R  S R    DH   + +VKL++  VPRT TE+ +RPL
Sbjct: 82  GGGGYRSGGGGEYGEPGSGPRHRYGSGRGDHSDHDNRNNYVKLFIGSVPRTATEDDVRPL 141

Query: 112 FEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYA 171
           FE HGD+VE+ +++D+ TG+QQG CFVKY+TS EA+RAIRAL NQYT PG + PI V+YA
Sbjct: 142 FEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYTLPGAMGPIQVRYA 201

Query: 172 DSEKDRLGVLE-KLYVGCLNKNTTKK 196
           D E++R G +E KL+V  LNK  T K
Sbjct: 202 DGERERHGAIEHKLFVASLNKQATAK 227

[Close]

BLAST of Cucsat.G15663 vs. ExPASy Swiss-Prot
Match: Q6K271 (Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=FCA PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 76/146 (52.05%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 52  GNGGLRPNCGNPNPILGR-KRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPL 111
           G GG R   G      G   R R  S R    DH   + +VKL++  VPRT TE+ +RPL
Sbjct: 82  GGGGYRSGGGGEYGEPGSGPRHRYGSGRGDHSDHDNRNNYVKLFIGSVPRTATEDDVRPL 141

Query: 112 FEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYA 171
           FE HGD+VE+ +++D+ TG+QQG CFVKY+TS EA+RAIRAL NQYT PG + PI V+YA
Sbjct: 142 FEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYTLPGAMGPIQVRYA 201

Query: 172 DSEKDRLGVLE-KLYVGCLNKNTTKK 196
           D E++R G +E KL+V  LNK  T K
Sbjct: 202 DGERERHGAIEHKLFVASLNKQATAK 227

[Close]

BLAST of Cucsat.G15663 vs. ExPASy Swiss-Prot
Match: O04425 (Flowering time control protein FCA OS=Arabidopsis thaliana OX=3702 GN=FCA PE=1 SV=3)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 83/176 (47.16%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 25  WNHPEFHNHPPDYRP-QPHFNGEMTEGFGNGGLRPNCGN-PNPILGRKR--PRNYSNRTV 84
           +N+P    +PP   P +  F G+  E   +  +RP       P+ G+KR  P +      
Sbjct: 54  YNYPA--KYPPSESPDRRRFIGKAME--SDYSVRPTTPPVQQPLSGQKRGYPISDHGSFT 113

Query: 85  PGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYS 144
             D ++ S  VKL+V  VPRT TEE IRP FE HG+++E+ +++DK TGQQQG CFVKY+
Sbjct: 114 GTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYA 173

Query: 145 TSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVLE-KLYVGCLNKNTTKK 196
           TS +ADRAIRAL NQ T PG   P+ V+YAD E++R+G LE KL+VG LNK  T+K
Sbjct: 174 TSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEK 225

[Close]

BLAST of Cucsat.G15663 vs. ExPASy Swiss-Prot
Match: Q8N6W0 (CUGBP Elav-like family member 5 OS=Homo sapiens OX=9606 GN=CELF5 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 91  VKLYVAQVPRTGTEEAIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIR 150
           +KL+V Q+PR   E+ ++PLFE  G I E+ +L+D  TG  +G  F+ Y     A +A  
Sbjct: 45  IKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQT 104

Query: 151 ALDNQYTFPGELTPINVKYADSEKDRLGVLEKLYVGCLNKNTTKK 196
           AL  Q T PG   PI VK ADSE  R G   KL+VG LNK  +++
Sbjct: 105 ALHEQKTLPGMARPIQVKPADSE-SRGGRDRKLFVGMLNKQQSEE 148

[Close]

BLAST of Cucsat.G15663 vs. ExPASy Swiss-Prot
Match: Q6DGV1 (CUGBP Elav-like family member 4 OS=Danio rerio OX=7955 GN=celf4 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-15
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 53  NGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFE 112
           +GG     G  N I     P   S  T+P    +A   +KL++ Q+PR   E+ +RPLFE
Sbjct: 14  HGGAASTNGLVNGISHTHSPA--SCATIPMKDHDA---IKLFIGQIPRNLDEKDLRPLFE 73

Query: 113 VHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYADS 172
             G I E+ +L+D+ TG  +G  F+ Y     A +A  AL  Q T PG   PI VK ADS
Sbjct: 74  EFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTALHEQKTLPGMNRPIQVKPADS 133

Query: 173 EKDRLGVLEKLYVGCLNK 191
           E    G   KL+VG LNK
Sbjct: 134 ES--RGEDRKLFVGMLNK 144

[Close]

BLAST of Cucsat.G15663 vs. NCBI nr
Match: XP_008447475.2 (PREDICTED: flowering time control protein FCA [Cucumis melo])

HSP 1 Score: 371 bits (952), Expect = 7.01e-122
Identity = 183/195 (93.85%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   PAPAPPPHQHPYQHQHQHQHQHNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNC 60
           P P PPPHQH  QH  QHQHQ NNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNC
Sbjct: 200 PPPPPPPHQHQLQHPFQHQHQQNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNC 259

Query: 61  GNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEI 120
           GNPN  LGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEI
Sbjct: 260 GNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEI 319

Query: 121 VILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVL 180
           VILRDKITGQQQGSCFVKYS+SVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVL
Sbjct: 320 VILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVL 379

Query: 181 EKLYVGCLNKNTTKK 195
           EKLYVG LNKNTTK+
Sbjct: 380 EKLYVGSLNKNTTKR 394

[Close]

BLAST of Cucsat.G15663 vs. NCBI nr
Match: XP_022157018.1 (CUGBP Elav-like family member 4 [Momordica charantia])

HSP 1 Score: 321 bits (822), Expect = 6.90e-103
Identity = 166/205 (80.98%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 3   PAPPPHQHP--YQHQHQHQH----------QHNNWNHPEFHNHPPDYRPQPHFNGEMTEG 62
           P PPPHQHP  YQ+QHQHQH          Q NNWN PEFHNH P+YR QPHFNGE  EG
Sbjct: 145 PPPPPHQHPPPYQNQHQHQHPPPQPHHHQPQQNNWNQPEFHNHQPEYRHQPHFNGEANEG 204

Query: 63  FGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPL 122
           FGNGGLRPNCGN N  LGRKRPRNYSNRTVP DHAEA   VKLYVAQVPRTGTEEAIRPL
Sbjct: 205 FGNGGLRPNCGNQNANLGRKRPRNYSNRTVPSDHAEA---VKLYVAQVPRTGTEEAIRPL 264

Query: 123 FEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYA 182
           FEVHGDIVEIVILRDKITGQQQGSCFVKY+TS+EADRAI ALDNQ+TFPGE+ PINVKYA
Sbjct: 265 FEVHGDIVEIVILRDKITGQQQGSCFVKYATSIEADRAIGALDNQFTFPGEMAPINVKYA 324

Query: 183 DSEKDRLGVLEKLYVGCLNKNTTKK 195
           D E++RLGVLEKLYVG LNKNTTK+
Sbjct: 325 DGERERLGVLEKLYVGSLNKNTTKR 346

[Close]

BLAST of Cucsat.G15663 vs. NCBI nr
Match: XP_023524604.1 (CUGBP Elav-like family member 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315 bits (808), Expect = 9.14e-101
Identity = 160/197 (81.22%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   PAPAPPPHQH--PYQHQHQHQHQHNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRP 60
           P P PPPHQH  PYQHQ  +QHQ NNWNHPEFHN PPDYRP P FNG   E FGNGG+RP
Sbjct: 166 PPPPPPPHQHQQPYQHQQPYQHQRNNWNHPEFHNPPPDYRPPPLFNGGAHEVFGNGGMRP 225

Query: 61  NCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIV 120
           N GN N  LGRKRPRN   RTVP DHAEA G  KLYVAQVPRTGTEEAIRPLFEVHG+I+
Sbjct: 226 NYGNQNANLGRKRPRNQPIRTVPADHAEAGGTAKLYVAQVPRTGTEEAIRPLFEVHGEIL 285

Query: 121 EIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLG 180
           EIVILRDK+TGQQQGSCFVKY+TS+EADRAIRALDNQYTFPGE+TPINVKYAD EK+RLG
Sbjct: 286 EIVILRDKLTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGEMTPINVKYADGEKERLG 345

Query: 181 VLEKLYVGCLNKNTTKK 195
           VLEKLYVG LNKNTTK+
Sbjct: 346 VLEKLYVGSLNKNTTKR 362

[Close]

BLAST of Cucsat.G15663 vs. NCBI nr
Match: KAG7036630.1 (Flowering time control protein FCA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315 bits (808), Expect = 1.08e-100
Identity = 160/197 (81.22%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   PAPAPPPHQH--PYQHQHQHQHQHNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRP 60
           P P PPPHQH  PYQHQ  +QHQ NNWNHPEFHN PPDYRP P FNG   E FGNGG+RP
Sbjct: 173 PPPPPPPHQHQQPYQHQQPYQHQRNNWNHPEFHNPPPDYRPPPLFNGGTHEVFGNGGMRP 232

Query: 61  NCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIV 120
           N GN N  LGRKRPRN   RTVP DHAEA G  KLYVAQVPRTGTEEAIRPLFEVHG+I+
Sbjct: 233 NYGNQNANLGRKRPRNQPIRTVPADHAEAGGTAKLYVAQVPRTGTEEAIRPLFEVHGEIL 292

Query: 121 EIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLG 180
           EIVILRDK+TGQQQGSCFVKY+TS+EADRAIRALDNQYTFPGE+TPINVKYAD EK+RLG
Sbjct: 293 EIVILRDKLTGQQQGSCFVKYATSIEADRAIRALDNQYTFPGEMTPINVKYADGEKERLG 352

Query: 181 VLEKLYVGCLNKNTTKK 195
           VLEKLYVG LNKNTTK+
Sbjct: 353 VLEKLYVGSLNKNTTKR 369

[Close]

BLAST of Cucsat.G15663 vs. NCBI nr
Match: XP_011651537.1 (flowering time control protein FCA isoform X2 [Cucumis sativus])

HSP 1 Score: 303 bits (777), Expect = 1.61e-98
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 47  MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 106
           MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 107 IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 166
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 120

Query: 167 VKYADSEKDRLGVLEKLYVGCLNKNTTKK 195
           VKYADSEKDRLGVLEKLYVGCLNKNTTK+
Sbjct: 121 VKYADSEKDRLGVLEKLYVGCLNKNTTKR 149

[Close]

BLAST of Cucsat.G15663 vs. ExPASy TrEMBL
Match: A0A1S3BIF0 (flowering time control protein FCA OS=Cucumis melo OX=3656 GN=LOC103489911 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 3.39e-122
Identity = 183/195 (93.85%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   PAPAPPPHQHPYQHQHQHQHQHNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNC 60
           P P PPPHQH  QH  QHQHQ NNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNC
Sbjct: 200 PPPPPPPHQHQLQHPFQHQHQQNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNC 259

Query: 61  GNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEI 120
           GNPN  LGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEI
Sbjct: 260 GNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPLFEVHGDIVEI 319

Query: 121 VILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVL 180
           VILRDKITGQQQGSCFVKYS+SVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVL
Sbjct: 320 VILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPINVKYADSEKDRLGVL 379

Query: 181 EKLYVGCLNKNTTKK 195
           EKLYVG LNKNTTK+
Sbjct: 380 EKLYVGSLNKNTTKR 394

[Close]

BLAST of Cucsat.G15663 vs. ExPASy TrEMBL
Match: A0A6J1DSB0 (CUGBP Elav-like family member 4 OS=Momordica charantia OX=3673 GN=LOC111023844 PE=4 SV=1)

HSP 1 Score: 321 bits (822), Expect = 3.34e-103
Identity = 166/205 (80.98%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 3   PAPPPHQHP--YQHQHQHQH----------QHNNWNHPEFHNHPPDYRPQPHFNGEMTEG 62
           P PPPHQHP  YQ+QHQHQH          Q NNWN PEFHNH P+YR QPHFNGE  EG
Sbjct: 145 PPPPPHQHPPPYQNQHQHQHPPPQPHHHQPQQNNWNQPEFHNHQPEYRHQPHFNGEANEG 204

Query: 63  FGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEAIRPL 122
           FGNGGLRPNCGN N  LGRKRPRNYSNRTVP DHAEA   VKLYVAQVPRTGTEEAIRPL
Sbjct: 205 FGNGGLRPNCGNQNANLGRKRPRNYSNRTVPSDHAEA---VKLYVAQVPRTGTEEAIRPL 264

Query: 123 FEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPINVKYA 182
           FEVHGDIVEIVILRDKITGQQQGSCFVKY+TS+EADRAI ALDNQ+TFPGE+ PINVKYA
Sbjct: 265 FEVHGDIVEIVILRDKITGQQQGSCFVKYATSIEADRAIGALDNQFTFPGEMAPINVKYA 324

Query: 183 DSEKDRLGVLEKLYVGCLNKNTTKK 195
           D E++RLGVLEKLYVG LNKNTTK+
Sbjct: 325 DGERERLGVLEKLYVGSLNKNTTKR 346

[Close]

BLAST of Cucsat.G15663 vs. ExPASy TrEMBL
Match: A0A0A0LBT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G536140 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 8.26e-99
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 47  MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 106
           MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 107 IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 166
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 120

Query: 167 VKYADSEKDRLGVLEKLYVGCLNKNTTKK 195
           VKYADSEKDRLGVLEKLYVGCLNKNTTK+
Sbjct: 121 VKYADSEKDRLGVLEKLYVGCLNKNTTKR 149

[Close]

BLAST of Cucsat.G15663 vs. ExPASy TrEMBL
Match: A0A5A7T550 (Flowering time control protein FCA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00580 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 1.95e-94
Identity = 144/149 (96.64%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 47  MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 106
           MTEGFGNGGLRPNCGNPN  LGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA
Sbjct: 1   MTEGFGNGGLRPNCGNPNANLGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 60

Query: 107 IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 166
           IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYS+SVEADRAIRALDNQYTFPGELTPIN
Sbjct: 61  IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSSSVEADRAIRALDNQYTFPGELTPIN 120

Query: 167 VKYADSEKDRLGVLEKLYVGCLNKNTTKK 195
           VKYADSEKDRLGVLEKLYVG LNKNTTK+
Sbjct: 121 VKYADSEKDRLGVLEKLYVGSLNKNTTKR 149

[Close]

BLAST of Cucsat.G15663 vs. ExPASy TrEMBL
Match: A0A6J1J993 (flowering time control protein FCA-like isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111482437 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 3.05e-75
Identity = 114/131 (87.02%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 47  MTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGDHAEASGHVKLYVAQVPRTGTEEA 106
           M+EGFGNGGLRPNCGN N  LGRKRPR +S+RTVP DHAEASG V+LYVAQVPRTGTEEA
Sbjct: 1   MSEGFGNGGLRPNCGNQNANLGRKRPRIHSDRTVPADHAEASGLVRLYVAQVPRTGTEEA 60

Query: 107 IRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQYTFPGELTPIN 166
           IRPLFEVHGDIV+IVILRDK TGQQ+GSCFVKY+TSVEADRAI ALDNQYTFPGELTP+N
Sbjct: 61  IRPLFEVHGDIVKIVILRDKTTGQQKGSCFVKYATSVEADRAISALDNQYTFPGELTPMN 120

Query: 167 VKYADSEKDRL 177
           VKYADSE+DRL
Sbjct: 121 VKYADSERDRL 131

The following BLAST results are available for this feature:

BLAST of Cucsat.G15663 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8BCZ8	1.2e-34	52.05	Flowering time control protein FCA OS=Oryza sativa subsp. indica OX=39946 GN=FCA...	[more]
Q6K271	1.2e-34	52.05	Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=F...	[more]
O04425	1.1e-32	47.16	Flowering time control protein FCA OS=Arabidopsis thaliana OX=3702 GN=FCA PE=1 S...	[more]
Q8N6W0	1.3e-15	43.81	CUGBP Elav-like family member 5 OS=Homo sapiens OX=9606 GN=CELF5 PE=1 SV=1	[more]
Q6DGV1	1.6e-15	39.86	CUGBP Elav-like family member 4 OS=Danio rerio OX=7955 GN=celf4 PE=2 SV=1	[more]

BLAST of Cucsat.G15663 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447475.2	7.01e-122	93.85	PREDICTED: flowering time control protein FCA [Cucumis melo]	[more]
XP_022157018.1	6.90e-103	80.98	CUGBP Elav-like family member 4 [Momordica charantia]	[more]
XP_023524604.1	9.14e-101	81.22	CUGBP Elav-like family member 6 [Cucurbita pepo subsp. pepo]	[more]
KAG7036630.1	1.08e-100	81.22	Flowering time control protein FCA, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_011651537.1	1.61e-98	99.33	flowering time control protein FCA isoform X2 [Cucumis sativus]	[more]

BLAST of Cucsat.G15663 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIF0	3.39e-122	93.85	flowering time control protein FCA OS=Cucumis melo OX=3656 GN=LOC103489911 PE=4 ...	[more]
A0A6J1DSB0	3.34e-103	80.98	CUGBP Elav-like family member 4 OS=Momordica charantia OX=3673 GN=LOC111023844 P...	[more]
A0A0A0LBT6	8.26e-99	99.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G536140 PE=4 SV=1	[more]
A0A5A7T550	1.95e-94	96.64	Flowering time control protein FCA OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1J993	3.05e-75	87.02	flowering time control protein FCA-like isoform X6 OS=Cucurbita maxima OX=3661 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 262..282
None	No IPR available	GENE3D	2.20.70.10		coord: 176..248 e-value: 6.6E-15 score: 56.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..183
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 98..271
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 1..92
None	No IPR available	PANTHER	PTHR15241:SF308	FLOWERING TIME CONTROL PROTEIN FCA ISOFORM X1	coord: 98..271
None	No IPR available	PANTHER	PTHR15241:SF308	FLOWERING TIME CONTROL PROTEIN FCA ISOFORM X1	coord: 1..92
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 190..222 e-value: 6.2E-6 score: 35.7
IPR001202	WW domain	PFAM	PF00397	WW	coord: 192..220 e-value: 1.7E-7 score: 31.2
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 189..222 score: 11.5066
IPR001202	WW domain	CDD	cd00201	WW	coord: 193..222 e-value: 3.42456E-7 score: 43.6706
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 194..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15663.T1	Cucsat.G15663.T1	mRNA
Cucsat.G15663.T3	Cucsat.G15663.T3	mRNA
Cucsat.G15663.T2	Cucsat.G15663.T2	mRNA
Cucsat.G15663.T4	Cucsat.G15663.T4	mRNA
Cucsat.G15663.T5	Cucsat.G15663.T5	mRNA
Cucsat.G15663.T7	Cucsat.G15663.T7	mRNA
Cucsat.G15663.T6	Cucsat.G15663.T6	mRNA
Cucsat.G15663.T8	Cucsat.G15663.T8	mRNA
Cucsat.G15663.T16	Cucsat.G15663.T16	mRNA
Cucsat.G15663.T11	Cucsat.G15663.T11	mRNA
Cucsat.G15663.T12	Cucsat.G15663.T12	mRNA
Cucsat.G15663.T13	Cucsat.G15663.T13	mRNA
Cucsat.G15663.T9	Cucsat.G15663.T9	mRNA
Cucsat.G15663.T14	Cucsat.G15663.T14	mRNA
Cucsat.G15663.T15	Cucsat.G15663.T15	mRNA
Cucsat.G15663.T17	Cucsat.G15663.T17	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding