Cucsat.G15660 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15660
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Myb-like transcription factor Myb5
Location	ctg2009: 5028457 .. 5029002 (+)
RNA-Seq Expression	Cucsat.G15660
Synteny	Cucsat.G15660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGTGAAAAAAGGGCCGTGGACGGCCGAGGAAGACTCTGCGCTTTACACTTATGTTACTGTTAACGGCGAAGGGCATTGGAACTCTGTTGCTCGCTCTACAGGTAAAACCCATCATTATTATTGTTAAGTTAATCATTTTTAACTAATTAAGTCCTGTAAATAACAATCTAATTAATTAATTTGGGTCTTTATTTATTTTCTTAAGGGTTGAAGAGAACTGGGAAAAGCTGTAGATTAAGATGGCTGAATTATCTCCGCCCTAATCTCCGCCGGGGAAATATTACTCTTCAAGAACAGCTCCTTATTCTTCAACTTCATTCTCGTTGGGGTAACCGGTCAGTTGTCTTTTCTTTTCTCATTTTAATTTATTTTTTTTATTTTTTACTTTTTAATGGATCAAAAACTAATAAATAATTATACATACGAACTTTGATTCAGGTGGTCGAAAATAGCTGAATTTCTTCCGGGAAGGACCGACAATGAGATAAAGAACTATTGGAGAACAAGAGTTCAAAAACAAGCTAAACAACTCAACTGTGATGTT

Coding sequence (CDS)

GATGTGAAAAAAGGGCCGTGGACGGCCGAGGAAGACTCTGCGCTTTACACTTATGTTACTGTTAACGGCGAAGGGCATTGGAACTCTGTTGCTCGCTCTACAGGGTTGAAGAGAACTGGGAAAAGCTGTAGATTAAGATGGCTGAATTATCTCCGCCCTAATCTCCGCCGGGGAAATATTACTCTTCAAGAACAGCTCCTTATTCTTCAACTTCATTCTCGTTGGGGTAACCGGTGGTCGAAAATAGCTGAATTTCTTCCGGGAAGGACCGACAATGAGATAAAGAACTATTGGAGAACAAGAGTTCAAAAACAAGCTAAACAACTCAACTGTGATGTT

Protein sequence

DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV

Homology

[Close]

BLAST of Cucsat.G15660 vs. ExPASy Swiss-Prot
Match: Q9LDE1 (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 90/113 (79.65%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           D+K+GPWTAEED  L  Y+  NGEG WNS++R  GL+RTGKSCRLRWLNYLRP++RRGNI
Sbjct: 18  DLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGNI 77

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 114
           TL+EQLLIL+LHSRWGNRWSKIA++LPGRTDNEIKNYWRTRVQK AKQL CDV
Sbjct: 78  TLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDV 130

[Close]

BLAST of Cucsat.G15660 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.0e-51
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           D+++GPWT EED  L  Y+  +GEG WNS+ARS GLKRTGKSCRLRWLNYLRP+LRRGNI
Sbjct: 19  DLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNI 78

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 114
           T QEQLLIL+LHSRWGNRWSKIA+ LPGRTDNEIKNYWRTRVQK AKQL CDV
Sbjct: 79  TPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDV 131

[Close]

BLAST of Cucsat.G15660 vs. ExPASy Swiss-Prot
Match: Q9FGY3 (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.8e-50
Identity = 88/113 (77.88%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DV++GPWT EED  L  Y+  +GEG WNS+AR   LKRTGKSCRLRWLNYLRP++RRGNI
Sbjct: 25  DVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVRRGNI 84

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 114
           TL+EQLLIL+LH+RWGNRWSKIA++LPGRTDNEIKNYWRTRVQK AKQL CDV
Sbjct: 85  TLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDV 137

[Close]

BLAST of Cucsat.G15660 vs. ExPASy Swiss-Prot
Match: Q2QZJ8 (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-48
Identity = 84/113 (74.34%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           ++++GPWT +ED  L  Y++ +GEG WN++AR+ GLKRTGKSCRLRWLNYLRP+++RGN 
Sbjct: 28  ELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDVKRGNF 87

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 114
           T +EQLLIL LHSRWGNRWSKIA+ LPGRTDNEIKNYWRTRVQK AKQLNCDV
Sbjct: 88  TAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDV 140

[Close]

BLAST of Cucsat.G15660 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-48
Identity = 83/112 (74.11%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           ++++GPWT EED+ L  Y+  NGEG WN VA+  GLKRTGKSCRLRWLNYL+P++RRGN+
Sbjct: 18  ELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRGNL 77

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCD 113
           T QEQLLIL+LHS+WGNRWSKIA++LPGRTDNEIKNYWRTRVQKQA+QLN +
Sbjct: 78  TPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIE 129

[Close]

BLAST of Cucsat.G15660 vs. NCBI nr
Match: XP_011651532.1 (transcription factor MYB108 [Cucumis sativus] >KGN58125.1 hypothetical protein Csa_017582 [Cucumis sativus])

HSP 1 Score: 241 bits (615), Expect = 7.13e-79
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. NCBI nr
Match: TYK20493.1 (transcription factor MYB108 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 4.69e-78
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDS LYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSLLYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. NCBI nr
Match: XP_008447462.1 (PREDICTED: transcription factor MYB108 [Cucumis melo] >KAA0038114.1 transcription factor MYB108 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 4.69e-78
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDS LYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSLLYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. NCBI nr
Match: XP_038905628.1 (transcription factor MYB2-like [Benincasa hispida])

HSP 1 Score: 234 bits (596), Expect = 5.55e-76
Identity = 109/113 (96.46%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDS LY YVTV+GEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 4   DVKKGPWTAEEDSLLYNYVTVHGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 63

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKI EFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 64  TLQEQLLILQLHSRWGNRWSKIVEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 116

[Close]

BLAST of Cucsat.G15660 vs. NCBI nr
Match: XP_022998511.1 (transcription factor MYB78-like [Cucurbita maxima])

HSP 1 Score: 227 bits (578), Expect = 3.69e-73
Identity = 103/113 (91.15%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           D+KKGPWT EEDS L++YV+++GEGHWNSVARSTGLKRTGKSCRLRWLNYLRPN+RRGNI
Sbjct: 3   DLKKGPWTPEEDSLLFSYVSIHGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNVRRGNI 62

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIA+FLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 63  TLQEQLLILQLHSRWGNRWSKIAQFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 115

[Close]

BLAST of Cucsat.G15660 vs. ExPASy TrEMBL
Match: A0A0A0L862 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535090 PE=4 SV=1)

HSP 1 Score: 241 bits (615), Expect = 3.45e-79
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. ExPASy TrEMBL
Match: A0A5D3DAA4 (Transcription factor MYB108 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00670 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 2.27e-78
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDS LYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSLLYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. ExPASy TrEMBL
Match: A0A5A7T3S3 (Transcription factor MYB108 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003350 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 2.27e-78
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDS LYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSLLYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. ExPASy TrEMBL
Match: A0A1S3BHI4 (transcription factor MYB108 OS=Cucumis melo OX=3656 GN=LOC103489904 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 2.27e-78
Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           DVKKGPWTAEEDS LYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI
Sbjct: 6   DVKKGPWTAEEDSLLYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 118

[Close]

BLAST of Cucsat.G15660 vs. ExPASy TrEMBL
Match: A0A6J1KAD5 (transcription factor MYB78-like OS=Cucurbita maxima OX=3661 GN=LOC111493124 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 1.79e-73
Identity = 103/113 (91.15%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 60
           D+KKGPWT EEDS L++YV+++GEGHWNSVARSTGLKRTGKSCRLRWLNYLRPN+RRGNI
Sbjct: 3   DLKKGPWTPEEDSLLFSYVSIHGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNVRRGNI 62

Query: 61  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 113
           TLQEQLLILQLHSRWGNRWSKIA+FLPGRTDNEIKNYWRTRVQKQAKQLNCDV
Sbjct: 63  TLQEQLLILQLHSRWGNRWSKIAQFLPGRTDNEIKNYWRTRVQKQAKQLNCDV 115

The following BLAST results are available for this feature:

BLAST of Cucsat.G15660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDE1	1.1e-51	79.65	Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1	[more]
Q10MB4	4.0e-51	80.53	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
Q9FGY3	5.8e-50	77.88	Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1	[more]
Q2QZJ8	1.1e-48	74.34	Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=...	[more]
Q9C9G7	7.1e-48	74.11	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]

BLAST of Cucsat.G15660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651532.1	7.13e-79	100.00	transcription factor MYB108 [Cucumis sativus] >KGN58125.1 hypothetical protein C...	[more]
TYK20493.1	4.69e-78	99.12	transcription factor MYB108 [Cucumis melo var. makuwa]	[more]
XP_008447462.1	4.69e-78	99.12	PREDICTED: transcription factor MYB108 [Cucumis melo] >KAA0038114.1 transcriptio...	[more]
XP_038905628.1	5.55e-76	96.46	transcription factor MYB2-like [Benincasa hispida]	[more]
XP_022998511.1	3.69e-73	91.15	transcription factor MYB78-like [Cucurbita maxima]	[more]

BLAST of Cucsat.G15660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L862	3.45e-79	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535090 PE=4 SV=1	[more]
A0A5D3DAA4	2.27e-78	99.12	Transcription factor MYB108 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7T3S3	2.27e-78	99.12	Transcription factor MYB108 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3BHI4	2.27e-78	99.12	transcription factor MYB108 OS=Cucumis melo OX=3656 GN=LOC103489904 PE=4 SV=1	[more]
A0A6J1KAD5	1.79e-73	91.15	transcription factor MYB78-like OS=Cucurbita maxima OX=3661 GN=LOC111493124 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..53 e-value: 9.3E-14 score: 61.7 coord: 56..104 e-value: 1.7E-13 score: 60.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 52..102 score: 9.523576
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..51 score: 11.567358
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..51 e-value: 1.30001E-9 score: 47.9554
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 77..100 e-value: 9.53171E-7 score: 40.6366
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 4..51 e-value: 5.6E-14 score: 52.1 coord: 57..100 e-value: 6.1E-14 score: 52.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..55 score: 26.286884
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 56..106 score: 19.948759
None	No IPR available	GENE3D	1.10.10.60		coord: 61..102 e-value: 2.3E-18 score: 67.9
None	No IPR available	GENE3D	1.10.10.60		coord: 3..56 e-value: 9.8E-19 score: 69.1
None	No IPR available	PANTHER	PTHR45675:SF1	MYB TRANSCRIPTION FACTOR-RELATED	coord: 1..113
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 1..113
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15660.T1	Cucsat.G15660.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding