Cucsat.G15562 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGTCAGAAGTGTTAAAATTGCAATTTAACCTAAATCATAAATGTATAATTGTGAGTTATGAGGTCGAAAATCGCAAAATCCCCAATCCAAAATTTATTTCTAGGTCAGTAATTGAATTGGAGAAACTGCGGCAATTCTTCCTTTGTTTGTTCTCCTTCTCCTCCTCTTCGCTTTCACCTTCTATTGTCTTCATCCGTATCAATTCATACTACCTACCTCCATACTCCTCTTCCCATTGTTGAAGGAACCTACAATCTGCTCTGTGTCTTCGAGCAGCTATGAAAGGATTCCAAATCAACAACACCACCCTAACTCTCGCTCTTTTCACAGACGTCACCAATTCCAAGTACTCTCTCTCTCTCCCGGTTTTTGAAAGTCCAAATTTTATCAACTGAAACTAGTGGGATACGCATTAATTCTTGTAAAAATCATGTGGATTTAGTACTCTTTATATTTTTGTTTCTCTCCACACGTATGCCCGCCAACTGTTTGAGAAAATGTCTGAACTAAGTGAGCAGAGAAATGGGGAAGATCACGTTGTATGCATTTACATGTATTTTTAACATAACGGCATCGATCTTACTGGATAAATTCGTTAGTTTCTCACTGATGTGGTATGAGGTTTCTTCAGTTTTTTAAGTGCGAGAGGTATTGCTTGAAGTTGGTGATTGAACAGTAATGTCTGTGTTTGATTTTAGTAGCTATTTGTGCAAATGATGGTAGTTTGAATAGAACTATGATTTAGGGTGCCATTTGTATATAACTTATGTGAATGTGTGTATTTATAGATCAAGCTTTGCTATTAATAAATGAAGTGTCTGATCATAAACAAATGATGTTATTAACAAATGTATCTATTTCCAGGGAACTTCTTGATTCTATGCAAGCTGGAACTTTGGAGCCGGAAGTTGCATTTCTCAATGCTTCACTTGTATGGTTGTTTTATATATGCCTATCTAATTTGTTTCCCACTCGCATGCTGATATGCTTGTGAAATCCCACCCACCACCCTTTGCTTGTTTTAGCTTTGAATTTTGCCCAAGAGTTATCTAATATTTCCTCCATAAATAACTGAAGACAGATTCCAGATGTTTTTCCAGTGCTTGCGGCTGCTCATAAGACACTGGTTTCTAAGTCAAGAGGTTCTCTGACCACCCGCACCCTTCATTCAGAACTTGTGTACAATTATTCGGGTTCAAAGCATGTAATTCTATATGACTTCTTGGATCTTGCAGACTGCTGCTTATTTGTTTGTGGGTTTGTACGAGTGATATTTGAATTTAATCCTATGCAGATTACAGAGTCTTTAAGAAGATGTGGAATTTCTGATAGCTCCTCCTATGTTCTTGCGGCTTGTTTTAATACGTCTCCTGATGAGGTTGGATCAACATGTCAAGCAAAAATAGACTTTGTTACTGTAAACTTTTAATTATATATTCTGATGAAATCTTGAAAAACTCAATTTTTTTGAACTATCTATTTACCCATGTTAGGTGAAGGCCATCGAGAAACTCGTACATGGTAAAGAGATCAACCTAGAGGAATTGGGAGAGAGAGCAGACCAAGCTCAGATACAAAAGGTACAACCTAGGTTTTCTTGATATGCATTACTTTATTTATTTAATTCTAAGGCTCCCATTTGATGATTACGGTTAGGTTTTCTTTTTTGTTTTTGAAAATTGTGTTTGTTTTTTCACAATGTTTACCTTGGAATTCTTAACCTTTTTTTTCCAAATCTTTTTAGAAAACCTATTATTTTTAGTTTTCTAACATTTGGCTGTTGACAATACTCCTAGAAAGTAATACCTTAACAAAGAAACCAATGGGTGGAAGTAGTGTTTACGAGCATAATTTTGAAAAAACAAAATGGCTTTCAAATGAGACATGAGTAATTAGGCGCTTAGGCTCGTTGTCCATCTCTACTAATTTAGAGACCCTTCTCTTACTTGAGCCTCTCCAAATCAAGATAGTTTTAAATTTTATTAAAATTTCTACTTGAACACCGAAAATTATTGTACTACGGTTTTGTCGTTGCCTATGGGAAAACGGTTGTTTTTTTTTTCTTTCAGCATTTTAAAATCACTGGACCAGAGTTGACGTTATCTCCAGTTGGAGAGGCTATAACATGTAGAATCGCTGCGCGGGATGCATTGTAGCTCCGAAAGTTGCAACTTCTTCTATATATTTGGAGTCCTCTGTACGCGAATGTGTTAAATTGTTTGGACAATCACTTTAAGGTTGGTGATGTCGTTTCAATTTTTATAGAATTTTCAAATTTTTAAGCTGTGGATTTTTTATGGGAATTGATGAATTTACAATTAGGTTGATGTCTAAATCTTTTTCACAGAATGTTCAAATAGTTATGCCGTTGATGTTCAGTGGAAATTAATTAATCAACTAGCTCTTGTTGGGTCGTTGATTTCTCTGTGCTGCCCATCTGAACCTAACTTAATGGGTAGATGTGTTATTATAGTCTATATTTTGGATGCAAAATATTATAGTCTTGGTTTATAATATTATGTATTTGTTGTGCAAAGTATTTTAGTTTATATTGTAATAGGTCTCTATTTGGAGTGCTGGTTATTATAGTCTAAATTATATTAGTTTGGGATTTGAATGTAGGTTATTTTAGACCGTGTG ATGAAAGGATTCCAAATCAACAACACCACCCTAACTCTCGCTCTTTTCACAGACGTCACCAATTCCAAGGAACTTCTTGATTCTATGCAAGCTGGAACTTTGGAGCCGGAAGTTGCATTTCTCAATGCTTCACTTATTCCAGATGTTTTTCCAGTGCTTGCGGCTGCTCATAAGACACTGGTTTCTAAGTCAAGAGGTTCTCTGACCACCCGCACCCTTCATTCAGAACTTGTGTACAATTATTCGGGTTCAAAGCATGTAATTCTATATGACTTCTTGGATCTTGCAGACTGCTGCTTATTTGTTTGTGGGTTTGTACGAGTGATATTTGAATTTAATCCTATGCAGATTACAGAGTCTTTAAGAAGATGTGGAATTTCTGATAGCTCCTCCTATGTTCTTGCGGCTTGTTTTAATACGTCTCCTGATGAGGTGAAGGCCATCGAGAAACTCGTACATGGTAAAGAGATCAACCTAGAGGAATTGGGAGAGAGAGCAGACCAAGCTCAGATACAAAAGCATTTTAAAATCACTGGACCAGAGTTGACGTTATCTCCAGTTGGAGAGGCTATAACATGTAGAATCGCTGCGCGGGATGCATTGTAG MKGFQINNTTLTLALFTDVTNSKELLDSMQAGTLEPEVAFLNASLIPDVFPVLAAAHKTLVSKSRGSLTTRTLHSELVYNYSGSKHVILYDFLDLADCCLFVCGFVRVIFEFNPMQITESLRRCGISDSSSYVLAACFNTSPDEVKAIEKLVHGKEINLEELGERADQAQIQKHFKITGPELTLSPVGEAITCRIAARDAL Homology
BLAST of Cucsat.G15562 vs. ExPASy Swiss-Prot
Match: Q5PQR8 (EKC/KEOPS complex subunit Tprkb OS=Rattus norvegicus OX=10116 GN=Tprkb PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12 Identity = 44/136 (32.35%), Postives = 81/136 (59.56%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy Swiss-Prot
Match: F1QZ15 (EKC/KEOPS complex subunit TPRKB OS=Danio rerio OX=7955 GN=tprkb PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 45/137 (32.85%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy Swiss-Prot
Match: Q8QZZ7 (EKC/KEOPS complex subunit Tprkb OS=Mus musculus OX=10090 GN=Tprkb PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.0e-11 Identity = 41/136 (30.15%), Postives = 80/136 (58.82%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy Swiss-Prot
Match: Q4WI37 (EKC/KEOPS complex subunit cgi121 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cgi121 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.9e-10 Identity = 41/138 (29.71%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy Swiss-Prot
Match: Q9Y3C4 (EKC/KEOPS complex subunit TPRKB OS=Homo sapiens OX=9606 GN=TPRKB PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.9e-10 Identity = 39/136 (28.68%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of Cucsat.G15562 vs. NCBI nr
Match: XP_004140698.1 (EKC/KEOPS complex subunit TPRKB [Cucumis sativus] >KGN57536.1 hypothetical protein Csa_011408 [Cucumis sativus]) HSP 1 Score: 276 bits (705), Expect = 1.03e-92 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Cucsat.G15562 vs. NCBI nr
Match: XP_008456125.1 (PREDICTED: EKC/KEOPS complex subunit Tprkb [Cucumis melo] >TYK25942.1 EKC/KEOPS complex subunit Tprkb [Cucumis melo var. makuwa]) HSP 1 Score: 269 bits (687), Expect = 5.70e-90 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Cucsat.G15562 vs. NCBI nr
Match: XP_038898952.1 (EKC/KEOPS complex subunit TPRKB [Benincasa hispida]) HSP 1 Score: 256 bits (654), Expect = 6.10e-85 Identity = 133/143 (93.01%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of Cucsat.G15562 vs. NCBI nr
Match: XP_023524844.1 (EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246 bits (628), Expect = 5.58e-81 Identity = 129/143 (90.21%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cucsat.G15562 vs. NCBI nr
Match: XP_022941609.1 (EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita moschata] >KAG7030987.1 EKC/KEOPS complex subunit Tprkb [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244 bits (622), Expect = 4.58e-80 Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy TrEMBL
Match: A0A0A0LBY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207370 PE=3 SV=1) HSP 1 Score: 276 bits (705), Expect = 4.98e-93 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy TrEMBL
Match: A0A5D3DQY2 (EKC/KEOPS complex subunit Tprkb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00010 PE=3 SV=1) HSP 1 Score: 269 bits (687), Expect = 2.76e-90 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy TrEMBL
Match: A0A1S3C2H5 (EKC/KEOPS complex subunit Tprkb OS=Cucumis melo OX=3656 GN=LOC103496157 PE=3 SV=1) HSP 1 Score: 269 bits (687), Expect = 2.76e-90 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy TrEMBL
Match: A0A6J1IY73 (EKC/KEOPS complex subunit Tprkb OS=Cucurbita maxima OX=3661 GN=LOC111481707 PE=3 SV=1) HSP 1 Score: 244 bits (622), Expect = 2.22e-80 Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of Cucsat.G15562 vs. ExPASy TrEMBL
Match: A0A6J1FNX6 (EKC/KEOPS complex subunit Tprkb isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446917 PE=3 SV=1) HSP 1 Score: 244 bits (622), Expect = 2.22e-80 Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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