Cucsat.G15551 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTAAAAGCCCAGCCCAATTTGAAAATAAATATAAGAAATAAATAAAGTTTTCAATTTTTGTTGAAATTTGTTGATGTTAGTATTCTCCGTTTGCTCCCCTCAGTTCTTCAATCTTCATCCTCTCTCTGGCTTTCAATTCCCTCTCTTTCTCTCTTTCTCTCAAACCCTAATCACATTTCCATGGTAGGATCTAATTCTTCTCGTCGCATTTCTGTTCATCAAGCCCTTGGCGGTGGTCATGGTACTTCCCTTCTCCTTTCTTCTCTGTTTCCTGATCTTTCAGTTTTCCAACTGCTACTACATTCATGCTTTAGTATTCCTTCCTCGATCACGGTTTGTCTTTTCATGATCGGAAAATGAATTTTTCATTGCAATCTGTATCTGAATTATGTGTTTCATTGGGTTCATTTCTTTAAGAAACTGCCCCGATCTTCTCCTTTATGTTCTTTTTTAATTTGCTCACTTTGTTTTTATTTCTATTAAATGTTGTTAGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATGCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCATCATTCTTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGGTATTTTGGCTCTTCCTTCTGCCTGCTTTCGGTGCTTTAGATAGTTTTGTTTTATAATCTCCATTTCTTGGGTCCAAGTTTGTGGAGTTAATGTTTTTTTTTATCGATGATGAATCAAAGTAAATAACATACATTATTAGAGACCCATTTCATTGTATCAACCTTAGCATATCTCACAGAATGAGATGGTAATTAATAGGATTTCAAATAAATATGTCCATACAAAGTTGAACGTTTTTCAAATTTTTTGTTGGAAAATTTTCTGAGGTGATAATTAATATGGCTTAGAATTATTGTTTTAGGTTAGCTCTGATTAAATATTCACAATCTCAAGATTTGAAATGAAATGGACGTAGAGTAATAGTTACCTTCCTTTGTGATTCAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCAATGGTTGCCAATGAACTGCGATTTTGTATCAATTTTGCACTTTCTATAGCACGCGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTAAGGTATCATCACTTGTCTTTTTGTCTGTGAGATGGCTGGGACTTGTGTTAATTATTCATGATTTCAGGTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGTGAGTTTTGTGGGGCCTTTGTTTATTTGTAATCAGCCGTTCGAATATCATAGCTGTTGTAGTTTATGCATTTTATCAAAATATTTTTGCAGGGGTCCTTCTCAGTCTGTCAGCTCCTATAGTGTATGACAAATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAGGAAGCTTGATGAGAATGTTTTAAGGAAGATTCCATTGCCCTTAAATAAGGAGAAGAAGATGCAATAGGCACAGTACCTCGTTTTATGATCGGTAGCTTCAAAAGAAGTGAGCTGGATTATCTTTTTCGTAATGTTTGACTCCATTTTTGTATCATGACTCGAACCATAAAAATTATTTCTGATTGACATAGTGATAATTATGTACTAATATTCTAATGCTTGTTAAAAAATCTCCTATTTTCTCTTCTTCTTTCTTGTGTTTTCTTTCCTTTAATTTGAGCATCAATCTATTTCTTTCTATTGTAATCTAAATGCCACCTACTTCTCTTGATGAAGGATTGTTAGACCTTGAAGTTTATGAATAATTTCTCGTAGCTTATGAGATTAGTTTATTACTTCTTAAGTTTCAATGTTCTATACGTTAACATCTCATAAGATTTCACCAAATCTGATCACTTAGTTTTCAACATTTTAGAAACATAACAGCTAATGAATTAGTTATTAGTATCTTTTCTTTTACACTTGTTTCAGTTGATTAGTTAGAGAAATTAATTAGTTACAAGTTTCTTTCATCTCCTCTTGTCCTTGTTTTTTTGATAAATAGATTTGTTTTAATTGTTCATCCCCTGCCTTAGATTAGTGAAGTTATTGATCTTCTTATGGCTCAATGTTACCACTTACCACTTACTGGTAATTTCCTTAAATGGTGATTTCATTGTAGCCCATTCTTGCAAAACTACCCATCATAGTGATTCTACCTTACCCGCTGATCATTAAGGTGTTTTCTTAAATATCTATATCTGGAAGGAATAGCCGATTATCTGTAGACAAGTATTCTTCTTTAAAGTCCTTTAGGCTTTTAGTGCAGCATGATTCTTCTTGGTGGTGCATCGTCCATGCAAAATCCTTTTGTAATTACAATGAGAAATCTCTTCTTTGGTAGAACATTGTGAAAGGGCTGTGTCTACCCATGGCTACTAGGTTGTTCATTAGTTCTTATAATGAATATACATCTTTATTATTATTACTATTATTTTTTCTATGTATGCTTGTCAATGAAGTTGACTTCTAGCTTTATGTTCTTGGCCAAAGTAACCAATCTGTCAAAAGTGCTTATCCTGTCGTAAAAGATTTAAGATGTGGGTAATGTTATATTGTTCACACAATTCTTGGATGGGCTGCCCTGATTCTTGAGAATGTGCTATACTACAATGGTCAATCCAATATAGTTCAACTAATCAATGCTTCATAGGATGTAGGATGAAAGTTTTTGTGTATGGTAAGAAACTTTGCAAATAGATAATTATTTATAGGGTAGTTGAGTCTTGTTATACTATAATTTTTGTTTTCAAAAGACATAGTTGCTGTCTTCTCAGTTGAAGAACTTTTGTTAAGCTTCTTTTAATTTCTTTTTCCTTCTGGCCATAACTTCTATTTTACCTTTTTCTGGTTTTCAAATATTTTCATCTGTTTGTCTGACTTGCGTTGGTTTTACTTGTTGCTACTTTGAAGTATGCAGAGGCACATTGGCTGGCTTTCAAAAGGATGATGAGTAGATCTGAAGATTTTGATCAGAGGCATTAAGATTGCTTTTAAAAGCGATGTACTTCAGAATTCTAGATCTTTTAGAAAGCTGTGTGGTATATAGTTTAACAGAAATGTATTCTGACTTCAACTTTGGGGTGAAAACTGAAATCAATAGTGTTTGATTTTGGATTGAATAGTGTCTTGGTTACCCTGGTTTCCCACTCTAGGTTTGTAATTTTTTTTGGCAATTATCTTGTTATTTGAACTAAATGACAATAAAATTTCATAGATTAGAACCTTTCTTTAACTTTGGCAATTTTGTTTTGTCATTTCTGTACCATGGCTGTTATTTGTGCCTGGATTGTAATGGTAACGAGATTTTGCATACCCTTCAGTTTGCTTCGGAACCTAGCA ATGGTAGGATCTAATTCTTCTCGTCGCATTTCTGTTCATCAAGCCCTTGGCGGTGGTCATGTGGCTGATGTGCTGTTATGGAAGAAATGGTGTGGTGGGGTTGTGATGCTAACGTCTGCAACTGCTTTGTGGTACCTGTTTGAAAGAGCCGGTTACAACTTCTTATCTTTTGTTGCCAATGTTCTATTGCTTCTTGTCATCATTCTTTTTTTCTGGGCCAAATCTGCTTCCCTTCTCAATAGACCTCTACCTCCGCTTCCTGATCTGGAAATTTCTGAGGAATCTGTTTCAATGGTTGCCAATGAACTGCGATTTTGTATCAATTTTGCACTTTCTATAGCACGCGATATTGCAATAGGCAGAAACCTTAAGCTCTTTCTTCAGGTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGGGTCCTTCTCAGTCTGTCAGCTCCTATAGTGTATGACAAATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAGGAAGCTTGATGAGAATGTTTTAAGGAAGATTCCATTGCCCTTAAATAAGGAGAAGAAGATGCAATAG MVGSNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLVIILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLFLQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYRKLDENVLRKIPLPLNKEKKMQ Homology
BLAST of Cucsat.G15551 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.0e-60 Identity = 122/203 (60.10%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy Swiss-Prot
Match: Q6NPD8 (Reticulon-like protein B10 OS=Arabidopsis thaliana OX=3702 GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.2e-55 Identity = 112/198 (56.57%), Postives = 148/198 (74.75%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.7e-34 Identity = 76/197 (38.58%), Postives = 126/197 (63.96%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.8e-34 Identity = 86/204 (42.16%), Postives = 124/204 (60.78%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33 Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = 0
BLAST of Cucsat.G15551 vs. NCBI nr
Match: XP_004140714.2 (reticulon-like protein B11 [Cucumis sativus] >KGN57499.1 hypothetical protein Csa_011153 [Cucumis sativus]) HSP 1 Score: 399 bits (1026), Expect = 4.46e-140 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cucsat.G15551 vs. NCBI nr
Match: XP_008456165.1 (PREDICTED: reticulon-like protein B11 [Cucumis melo] >XP_008456167.1 PREDICTED: reticulon-like protein B11 [Cucumis melo] >TYK13890.1 reticulon-like protein B11 [Cucumis melo var. makuwa]) HSP 1 Score: 395 bits (1015), Expect = 2.12e-138 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cucsat.G15551 vs. NCBI nr
Match: XP_038906138.1 (reticulon-like protein B11 [Benincasa hispida]) HSP 1 Score: 365 bits (938), Expect = 1.16e-126 Identity = 192/207 (92.75%), Postives = 198/207 (95.65%), Query Frame = 0
BLAST of Cucsat.G15551 vs. NCBI nr
Match: KAA0037183.1 (reticulon-like protein B11 [Cucumis melo var. makuwa]) HSP 1 Score: 356 bits (914), Expect = 2.89e-123 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Cucsat.G15551 vs. NCBI nr
Match: XP_022941946.1 (reticulon-like protein B11 [Cucurbita moschata] >XP_022941947.1 reticulon-like protein B11 [Cucurbita moschata]) HSP 1 Score: 355 bits (912), Expect = 1.10e-122 Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy TrEMBL
Match: A0A0A0L980 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G199610 PE=4 SV=1) HSP 1 Score: 399 bits (1026), Expect = 2.16e-140 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy TrEMBL
Match: A0A1S3C273 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496185 PE=4 SV=1) HSP 1 Score: 395 bits (1015), Expect = 1.03e-138 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy TrEMBL
Match: A0A5D3CR52 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00790 PE=4 SV=1) HSP 1 Score: 395 bits (1015), Expect = 1.03e-138 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy TrEMBL
Match: A0A5A7T2J0 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00960 PE=4 SV=1) HSP 1 Score: 356 bits (914), Expect = 1.40e-123 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Cucsat.G15551 vs. ExPASy TrEMBL
Match: A0A6J1FMI0 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111447157 PE=4 SV=1) HSP 1 Score: 355 bits (912), Expect = 5.33e-123 Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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