Cucsat.G15550 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTAGAGTTTTCCCTTATTTTTTTAAAGCTTTAGCGAGTAAAAAACAGATGATTCAACCACGATGGGTCCAAAACTCCAAAATAAACCAACAAATACTCGGAAATGTCAAAAGGCATAACTTTGAATTCCTACGGCGTCGGCGAGGCATAAACTCACTGCTCTTCGACGGTCGACAGAAATGAAGTCAAAGAATCCTCGATTCACTTGAAGGTGGGAGAAAACATAGCTGCTTCAGTTACCATTAGACCTTCTTGGAGTTTATTGAGGAAATTTTTACAATTAGGGCTTTAGGGTTTCTGGAATACCATGTCAACCGGCAAGCTTAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCCAAACCTGACACGCAGTTGGCCACGGCTGAGTCTAACGCGCTTGTCGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTACGGAGAATCATAGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGGTACTCCAGTGGATTATCTTGTTTTATATTGCGTAGATTTTCATCTGGGATTGATTCTTGTTGATGACTTTTGTTTTCGTATTACTTTGTGGGATATTTTTACGATGAATGTTTAATGCATTGATGGAAAATTTGTAATTGCATTACTTGAAGTGGTTATTGACGGAGTATGAAATGTATGTTAAGCCTTGGGATGTGCTAACAAACTTGTTTCCTGACATTTTTTTATCATTCGAGTTATTGAGGGAGCAAAGGTTGATGAGTGGAAGAACTTTTTATCGGGCGGAAATAGGCAGGGTGTGAACGACAGGGGAGTTGAATGAAGGTTGATGTTTCTTATTTTGATGGGAACTGGAATCTTGAAAATTCCTAGATTCGGTTATTAGGTCATGGAGCAGTTATTTGAATCTATGGACATCTGCAAAGAAATGGCTTAGAACTCAAGGACTCAGTTGTGGAACCTGTAGGATTGACCTTGTTCAAGTAGGTTGTGACATTTGTAAAGAAGATCATGGTGTACAAATTGAAAGAGCGAAGCTAAGGCCCTAGGGTTGTTGTAACCATTGCAAAAGCATTGTTGAAAAAGGTAGAAATTAGATGAATACATGACAAAAAAGACAACCTACATGGTAGGAATACAAGTAGGATGTAGTTGGATTACCAATTAATTGTTTTATGTTCGTAGGTAATAGGAAAACTGGGGCATCTAGTTTATGTTCAGAATGGTTTGGTAGTTGAAGAGAGAGACAAGATTTTATTAGATGCCTGGCATGTTAGAAAACAAGGAAAATATCCACCAATAAATTTGAATGGATCTAGAATTGTGGATTTATCTTAAAATGGGATGCCCATTGTTTCATTTTAATTATTTTGTAAACTTTCGAGTGAAAGATGATACATTTGATAAAATTTTCTGGTGACATAATGAAGTAATCTTATCCTCTCACAGTGTGAGGTAGAAATGAGTTGGAGTAATGTTGTGTTCCATGCACCCATATTTTCATATGATATAGCTATGGTTATCTCCTACCAAAATCAAGTTACTATGACTATTATCACTCAGGTTTTTGTGGTAGAGTGCATCAATTGACCATGGTGTAACAGTAGTATGGAGACTGTTATCAACAATACTCTTGAAATTTTGGCCAAAGTAAATATGTTCCTTGCTTTTGTTGATTTTCCCATGTCATCTAAGAACGGCTAATGTAATTTAATAGAAGTGACAGGACGGCCGACAGGTTTATGAAAATACTATTTGAAATAAAAATGCTCTTCAGTCTGGTGTGGATCGATCCTTTTCAACCTGATTCAATGTTACTGGTGTTTAGGAAAGGAAGTCTCCACTTGTGTGGTTAAGTCTACAATTTTTACTTTAGCATGCATTAGATCTTTTTGCTTCCTTTAATCTATTTTTATTCCTCTCTCCTTAATAAAGAGCAGCTATTCGTGAGTTTATGGTAATATGTCTCTATCCTTGGATTATGTAGTAATGTTTGCTTGTTCCATCAAATTTTCAAATGGCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACATCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAATTGAATTCGGGTGAAGATGAGAATCAGAAAGATGAGTCCTCTGATGATGAAGGGGATACGGATAAGGGTGAGGATGAAGCAACATGACTGGATCTTTCCCACCTGGAATCAAAGTTTAAAGTTCGAACTTTTCTCCCCAAGCCTTTCCAGATGAGCATCGAACCAGGTGACAACCACGAGTTTGCGTACCTGACATTTTGCTGGTTTGCAATTCCTTATGAGCCGTTGTAGTACGAGGATCTGTTAGCTTTTGTGATTTTCTTGAAGGTGAGGTTGGAAGAATTGGATCATTTGAATATAATTCTGCTATCTTCTCACAGGACACCACACACTCTCTCTTTAAATTACATGACAACCAACGTGTACGCAGAATATCTATTACATTACATGTTGAACAGATCGATAGAATTTTAGTTTAGTCTGAGGGATACTCGTTGCTTATGAACTTGTTGCTTATGATTTTATGAACGGAAGGGATGTAATTCTGAGATGAGCAGAGATGCAAAGTTCAAGAAATGTGATTCAATACTTTGGCCGACACTTCTAGAAACTGATATAGGTTATTAGATACAAAACTGAGGCATGCTTTGATCATTAGAATTGAATGAGGGCTGAAAATTTGGTCCTGACATTACAACTAATATTGAATGAAGCAGATTGATGATGCAGGGATACTTTGACTATCTGTTTGAATCACAAGTGTTTGTTAAGTGAATGTGGTTGTTCCTGTGATTGACAGATGATTAGATTATTAATAATCGAAGG ATGTCAACCGGCAAGCTTAAGGACGGGGAACGTCGGCTGGTGATTCCGATGCCTCCCAAACCCAAACCTGACACGCAGTTGGCCACGGCTGAGTCTAACGCGCTTGTCGAATATACGCCGCCGGTGAAGGAGGAGGATGAGGATTTGGAGGTCAAGCTACGGAGAATCATAGATAATGTTCCTGTTCGTGTCAGCAACACGTCTGGCAGCTCTGCTGGTTCTGGTTCCGGTGATTTTCACCAGTATAGGCAAATGAGGCGAAAAGAGCAAGACAGACTTGCTAGAATGGACGTTGATTATCAGAAAAAGAAAGAAATAGCCGAATTCAATATGAGAAGGGAAGAGAGAATGAAAGCTGCTGAGGAGCGTACATCAAAGAAGCGCTTAAAACGCCAAAAGAAGAAGCAAAGAAGAAAAGAAAAGAGGAGCAAATTGAATTCGGGTGAAGATGAGAATCAGAAAGATGAGTCCTCTGATGATGAAGGGGATACGGATAAGGGTGAGGATGAAGCAACATGA MSTGKLKDGERRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQKKKEIAEFNMRREERMKAAEERTSKKRLKRQKKKQRRKEKRSKLNSGEDENQKDESSDDEGDTDKGEDEAT Homology
BLAST of Cucsat.G15550 vs. ExPASy Swiss-Prot
Match: Q9CWV6 (PRKR-interacting protein 1 OS=Mus musculus OX=10090 GN=Prkrip1 PE=1 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07 Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy Swiss-Prot
Match: Q2KIT1 (PRKR-interacting protein 1 OS=Bos taurus OX=9913 GN=PRKRIP1 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06 Identity = 62/174 (35.63%), Postives = 90/174 (51.72%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy Swiss-Prot
Match: Q9H875 (PRKR-interacting protein 1 OS=Homo sapiens OX=9606 GN=PRKRIP1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy Swiss-Prot
Match: Q5R5J3 (PRKR-interacting protein 1 OS=Pongo abelii OX=9601 GN=PRKRIP1 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy Swiss-Prot
Match: Q5ZKU0 (PRKR-interacting protein 1 homolog OS=Gallus gallus OX=9031 GN=PRKRIP1 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 0
BLAST of Cucsat.G15550 vs. NCBI nr
Match: XP_011651236.1 (PRKR-interacting protein 1 [Cucumis sativus] >KGN57498.1 hypothetical protein Csa_011493 [Cucumis sativus]) HSP 1 Score: 303 bits (775), Expect = 5.79e-103 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of Cucsat.G15550 vs. NCBI nr
Match: XP_008456169.1 (PREDICTED: PRKR-interacting protein 1 [Cucumis melo]) HSP 1 Score: 296 bits (758), Expect = 2.26e-100 Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Cucsat.G15550 vs. NCBI nr
Match: XP_038886372.1 (PRKR-interacting protein 1 [Benincasa hispida]) HSP 1 Score: 284 bits (726), Expect = 1.70e-95 Identity = 160/172 (93.02%), Postives = 168/172 (97.67%), Query Frame = 0
BLAST of Cucsat.G15550 vs. NCBI nr
Match: XP_022941948.1 (PRKR-interacting protein 1 [Cucurbita moschata]) HSP 1 Score: 278 bits (711), Expect = 3.40e-93 Identity = 162/173 (93.64%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Cucsat.G15550 vs. NCBI nr
Match: XP_023512975.1 (PRKR-interacting protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277 bits (708), Expect = 9.75e-93 Identity = 161/173 (93.06%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy TrEMBL
Match: A0A0A0L705 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199600 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 2.80e-103 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy TrEMBL
Match: A0A1S3C2Q3 (PRKR-interacting protein 1 OS=Cucumis melo OX=3656 GN=LOC103496186 PE=4 SV=1) HSP 1 Score: 296 bits (758), Expect = 1.09e-100 Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy TrEMBL
Match: A0A6J1FTH7 (PRKR-interacting protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447158 PE=4 SV=1) HSP 1 Score: 278 bits (711), Expect = 1.65e-93 Identity = 162/173 (93.64%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy TrEMBL
Match: A0A6J1IY34 (PRKR-interacting protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481671 PE=4 SV=1) HSP 1 Score: 275 bits (704), Expect = 1.92e-92 Identity = 160/173 (92.49%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Cucsat.G15550 vs. ExPASy TrEMBL
Match: A0A5D3CUJ1 (PRKR-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00780 PE=4 SV=1) HSP 1 Score: 273 bits (698), Expect = 8.07e-91 Identity = 167/221 (75.57%), Postives = 171/221 (77.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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