Cucsat.G15466 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15466
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RING-type domain-containing protein
Location	ctg2009: 6060580 .. 6063323 (-)
RNA-Seq Expression	Cucsat.G15466
Synteny	Cucsat.G15466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTAATCCCTCTCTCCGGGTTCTTCCTAACATTATTCAACAAAGAAAGCTACTTTCTCTCTTTTTGATGATCTTCTTCACCGATTCAAATCCGATCTAGAAATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGTATATATATATATATTGATTGTGTTTCTTCTCTTGTTTTTTATGTGAATCGTGGAGATATATGAGCGGATCCGAGAGTTTCTTGTTCCAATTGGGATCGATTTGTTGGAAAGTGGTGTTGATTTCTTGGTTTTTTGTTTTTAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGGTGTGAATTCTTCTCTCCAGTGCTCTGAGCATTTGGATTTCCTTTTAGCCCTAATTAATTCCTTTCCTTACCCGACAAATGTTTACAAATTTTGTTATGGATGGTTTCCTTTCTTGTCATTTCATTAAAGGTTCATGCATAGAAACATTTGAATTCACAATCAGACTCTAATAACAAAACGAGTATTTTAGGTCCTATTTGGTATTGATTTAGTCTATTTTGTTTTTTAGAAATTATACATGTTTTTTTAAGACTTCAGTGTAAGGATTTTCACCTGTTATTAACCACATATGTGAATTCTTAATCAAATTCTAGGTAACCATTTGATTTTTAATTTTTGAAACATTGACCTACAGTAATTCTCATAAAAAATCAAATTGTTACTACATAGAGTCCTAGCTTTCAAATTGCTCTTAAAAGTAGGTAACAAGAAAAGCAAGGGTTAAACAGTATTTATAAACTTAGTTTTCTTTTGATGAATGATGGATGGCTGGCTAGAGTTTCAGAATTGTGCCCATTTTCAAAATTTATGGAGTAGATATGAACAGAGTTGTTTCAAATGACATGAACAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATATTCTCTCCACTTACAAGCTTGAGACATCTTTTTGTACACTTCTCTCTCATTCTTAACTGTCTCTTTTTTCCCCCTAATTCTTTTCACAGATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGGTAAGCCCAAAACTGACTTCTTGTTCTTGCACGTTTTGGAATTTTGAGTTTGTTTTAATTCCTAAATTATGCAGCAAAATTATTTTAGTTGATTTTTCATTAATTATTACATAATTTCCATTTCTTGACCAGTCAATAGAAATTTAAAATGTCAATACACATAAAATTGATATTTTTGTGACATATTCAATATTTTGATAAAATTCACACACATACTAAACTACTAGATACAAAATTAAAAGTTTACCAGTTTATGGCTGATATTAACAAACATGTTAGTTTTCAACAATAGCGAAAATGTCAATAACCCAAAATGGAAACTTCAAGGACTTATTGACATTTTTAAAAGTTCATTGATCCATCCTGCAAACTTACACCAGTATGAAAATTTGGAGACTAAAGTTCTGAAGCTGAACTTTTGTTTTTCACTCTTTTTGTAGTTTCTGCAAGAAATGTCTAAGATCTGCAGCTGACAAATGTGGAAAAAGGTGCCCTAAATGCAGACAACTAATAAGGTTGAATTTGCAACTCCAAAAGTTCCATGAACCAAATCAGTTGGGATCATTTCATTTTCAAACATTTAGTGCTTATATCTCTCTTGTTGATCTTAAATGTGCAGCAATGGGAGATCTTGCACTGTCAATACAGTTCTTTGGAACACAATACAGCTTCTCTTTCCCAAAGAGGTTGAAGCAAGGAAGGAAGCAAGAGAGTGTAATAGCCGTGAAAAGAAGATTCAAGACCCAGAAAAGGCATTCTATAGTAGTCTGCAGAACTATGATACAAGACCAATTGGCACGTCGAGTAGGCATGCTAGTACAAGAAGAAGAGGGGAAATAACAGTTCAGGAGGAGAATGGTGAATGGGACAGCAGGGTGACACAACGAGCTGTGCCTTCAAATGCTGAAAGCAGAGTCCAGACCAGAATGCACCGTCGAAGTATTCGACCAATGAGGATGGCGACTCGAGGTGTAGATGTAAGAAGTAGTAGGAGAGGTACGCCAGACCAAGATCAGGATGCTGCTTTAGCGCTGAGGCTACAAAGGGAAGAGTTTTTGGAGGCTTTTAGAGACACCACTCAAGTTGATACCAGAAGCTCGTTGTCCTTGACTAGAGCTAATATAAGAGCAATTGCTTCTAGGGCAGCCATTAACCTTCGCATTAGTGGCCACCAGAATTTGTAATCTTGTACTTTTTCTTCGACTAACTTTCGAATGTCTTGAACTTCTAATAATCTAATGCTAATCTAATGCCGACTGTTCTTGAATCTTGGACAAACAATTAAGCTTTGAAGCATAAAAATAGAACTTTTGCTATTACAAACTTGAACCGGAAGTGAGAGAAAGAGAGAACTCATAACTGGGAAAAAATGTACACAAATCGTGATAAAAAATTGGAAAGAAAAGGTTCAGTCTCGTTGTTGGCTTTCGATAGAGAATTCGAAGCATTTTTACAAGGCCAATGATATTTGTAGCCTCCTAATCTCAGGCAAGTTCCCTATCTTACAAAAGATCAAAATGGAAGGAGGAAAAACTTTGATTTAACGCCTACGAAAAAATGTTACACTCCCTCATTCTACATACATGGCATGATCTCCAACCGTGACACTACCTCAACTCGGTTATGTCTTGGCTACTTCAGAATATACCATCAATAGGAGAACTCGTGGCCTCGTAGTGAAATATATTTTTTGACCCAGATGGCAATGTCCTCTGCACAAGCTTGGGCTTGAGGTGTCTTGAGAAGAATATCGAGGGTTGCAAATTCGTGCACTGCATCCTTGTAGTCGAGAACAGGTGCATCGACATTTACCTTTCGAAGTTCTTCAGAATAAGCTATGGCTCGGTCTCTCATCCAATCAAGTTCCGCCACAACTGTCAGTGTTGGTGGCATGAGCTTTAGAGGTGGGCCTTCTCTACCGGAAACAAGTGGATTTGCAGCTGGATGATCAAGACTAAAGTTTTCCTCGGGTAGGAAAAGTTTCCAAGCAAGAAGGCACATAGCTTTGTCGTAAAAATACGAATTTGCCAGCTTCAACTCTGAATGAGTGGGGACACTACCAACAAAAAACGGATATAGGAGAACCTGGGCAACTACCTTGACAGGATCCAAGAGCTTACCAGCCTCCACAGCCTTTCGAGCCACATAATCCGCTACATTTGCTCCACAGCTAACCCCAAGAAGAACACATCT

Coding sequence (CDS)

ATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATATTCTCTCCACTTACAAGCTTGAGACATCTTTTTGTACACTTCTCTCTCATTCTTAACTGTCTCTTTTTTCCCCCTAATTCTTTTCACAGATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGTTTCTGCAAGAAATGTCTAA

Protein sequence

MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLPLDKLREELSCAVRIFSPLTSLRHLFVHFSLILNCLFFPPNSFHRFVWKFASNLVPHLVDTVSARNV

Homology

[Close]

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_004145719.1 (uncharacterized protein LOC101209296 [Cucumis sativus] >KGN58207.1 hypothetical protein Csa_017490 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 4.37e-85
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQ 60
           MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQ
Sbjct: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQ 60

Query: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120
           QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK
Sbjct: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120

Query: 121 KSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           KSDSMVEQKADASSLTSSTLP +DKLREELSCA+ +   F P T+
Sbjct: 121 KSDSMVEQKADASSLTSSTLPCMDKLREELSCAICLEICFEPSTT 165

[Close]

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_008450054.1 (PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo])

HSP 1 Score: 233 bits (595), Expect = 4.86e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

[Close]

BLAST of Cucsat.G15466 vs. NCBI nr
Match: KAA0056261.1 (LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var. makuwa] >TYK05240.1 LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (595), Expect = 4.86e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

[Close]

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_038895790.1 (putative E3 ubiquitin-protein ligase RING1a [Benincasa hispida])

HSP 1 Score: 227 bits (578), Expect = 2.02e-69
Identity = 134/172 (77.91%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGSTASASE       SKP GI ND +SFLSPRFKSAAAMAGWDEE LL ASLVVDD
Sbjct: 1   MVPEGSTASASEPERRTIESKPPGIGNDVESFLSPRFKSAAAMAGWDEETLLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPERE QQKKRSVLQRKSPASG RRKRRTLTSIIS+PV VLDLDE EPTVKDD PKQ+P+
Sbjct: 61  TPERELQQKKRSVLQRKSPASGLRRKRRTLTSIISVPVTVLDLDEEEPTVKDDAPKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKSDSMVEQK DASSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSDSMVEQKVDASSLSCSTLPCMDKLREELSCAICLEICFEPSTT 172

[Close]

BLAST of Cucsat.G15466 vs. NCBI nr
Match: XP_022984007.1 (E3 ubiquitin-protein ligase TRIM39-like [Cucurbita maxima])

HSP 1 Score: 211 bits (538), Expect = 1.89e-63
Identity = 128/172 (74.42%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGSTASASE       S+PL   NDADSF SPRFKSAAAMAGWDEEALL ASLVVDD
Sbjct: 1   MVQEGSTASASEPEQRVIESRPLECGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPEREFQQKKRSVL  KSP SGSRRKRR  TS ISIPVAVLDLD  EPTVKDD  KQ+P+
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRISTSKISIPVAVLDLDAEEPTVKDDATKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKSDS++EQKA ASSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSDSLIEQKAGASSLSCSTLPFIDKLREELSCAICLEICFEPSTT 172

[Close]

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A0A0LBY2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 2.12e-85
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQ 60
           MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQ
Sbjct: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQ 60

Query: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120
           QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK
Sbjct: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120

Query: 121 KSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           KSDSMVEQKADASSLTSSTLP +DKLREELSCA+ +   F P T+
Sbjct: 121 KSDSMVEQKADASSLTSSTLPCMDKLREELSCAICLEICFEPSTT 165

[Close]

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A5A7URU5 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00490 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 2.35e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

[Close]

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A1S3BPD3 (LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103491762 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 2.35e-72
Identity = 138/164 (84.15%), Postives = 144/164 (87.80%), Query Frame = 0


Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
            DSMVEQKADASSL+SSTLP +DKLREELSCA+ +   F P T+
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTT 169

[Close]

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A6J1J0X7 (E3 ubiquitin-protein ligase TRIM39-like OS=Cucurbita maxima OX=3661 GN=LOC111482456 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 9.14e-64
Identity = 128/172 (74.42%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGSTASASE       S+PL   NDADSF SPRFKSAAAMAGWDEEALL ASLVVDD
Sbjct: 1   MVQEGSTASASEPEQRVIESRPLECGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPEREFQQKKRSVL  KSP SGSRRKRR  TS ISIPVAVLDLD  EPTVKDD  KQ+P+
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRISTSKISIPVAVLDLDAEEPTVKDDATKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKSDS++EQKA ASSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSDSLIEQKAGASSLSCSTLPFIDKLREELSCAICLEICFEPSTT 172

[Close]

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL
Match: A0A6J1F9B4 (E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441989 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 1.34e-62
Identity = 126/172 (73.26%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MVSEGSTASASE-------SKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDD 60
           MV EGS ASASE       S+PL   NDADSF SPRFKSAAAMAGWDEEALL ASLVVDD
Sbjct: 1   MVQEGSRASASEPERRAIESRPLESGNDADSFFSPRFKSAAAMAGWDEEALLIASLVVDD 60

Query: 61  TPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 120
           TPEREFQQKKRSVL  KSP SGSRRKRRT TSIISIPVAVLDLD  EPTV+DD  KQ+P+
Sbjct: 61  TPEREFQQKKRSVLHCKSPTSGSRRKRRTSTSIISIPVAVLDLDAEEPTVRDDATKQDPE 120

Query: 121 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAVRI---FSPLTS 161
           +AEAE KKS+S++EQKA  SSL+ STLP +DKLREELSCA+ +   F P T+
Sbjct: 121 TAEAEPKKSNSLIEQKAGDSSLSCSTLPCIDKLREELSCAICLEICFEPSTT 172

The following BLAST results are available for this feature:

BLAST of Cucsat.G15466 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145719.1	4.37e-85	92.73	uncharacterized protein LOC101209296 [Cucumis sativus] >KGN58207.1 hypothetical ...	[more]
XP_008450054.1	4.86e-72	84.15	PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucum...	[more]
KAA0056261.1	4.86e-72	84.15	LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo var...	[more]
XP_038895790.1	2.02e-69	77.91	putative E3 ubiquitin-protein ligase RING1a [Benincasa hispida]	[more]
XP_022984007.1	1.89e-63	74.42	E3 ubiquitin-protein ligase TRIM39-like [Cucurbita maxima]	[more]

BLAST of Cucsat.G15466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBY2	2.12e-85	92.73	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592120 P...	[more]
A0A5A7URU5	2.35e-72	84.15	LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo v...	[more]
A0A1S3BPD3	2.35e-72	84.15	LON peptidase N-terminal domain and RING finger protein 3-like OS=Cucumis melo O...	[more]
A0A6J1J0X7	9.14e-64	74.42	E3 ubiquitin-protein ligase TRIM39-like OS=Cucurbita maxima OX=3661 GN=LOC111482...	[more]
A0A6J1F9B4	1.34e-62	73.26	E3 ubiquitin-protein ligase ORTHRUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 151..189 e-value: 1.1E-6 score: 38.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 151..190 score: 12.474524
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 151..189 e-value: 5.3E-7 score: 29.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 102..213 e-value: 3.7E-20 score: 73.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	PANTHER	PTHR23328	UNCHARACTERIZED	coord: 22..193
None	No IPR available	PANTHER	PTHR23328:SF6	SUBFAMILY NOT NAMED	coord: 22..193
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 143..195
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 166..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15466.T4	Cucsat.G15466.T4	mRNA
Cucsat.G15466.T5	Cucsat.G15466.T5	mRNA
Cucsat.G15466.T6	Cucsat.G15466.T6	mRNA
Cucsat.G15466.T7	Cucsat.G15466.T7	mRNA
Cucsat.G15466.T1	Cucsat.G15466.T1	mRNA
Cucsat.G15466.T2	Cucsat.G15466.T2	mRNA
Cucsat.G15466.T3	Cucsat.G15466.T3	mRNA
Cucsat.G15466.T8	Cucsat.G15466.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding