Cucsat.G15441 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15441
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	CCHC-type domain-containing protein
Location	ctg2009: 5094336 .. 5099687 (-)
RNA-Seq Expression	Cucsat.G15441
Synteny	Cucsat.G15441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCTTTTTCTTTCCTTCTTCTGATTTCCTCTCCATCATGTTTTTGCCCGAATATTTGTCGCTCTCAGTATCAATTCCTCACTAACTAACTCTTCTCTTCCCCCCCTCCGTTTTGGATCTTTATTAGTCTTTCTATCTCTCCCCGACAAACCTTTCTTTTCGTTTCAGCGTTGTTCTTTGTACGTTTTCGATTTTGCTTCAATTGGAAGTTCATTATTCGTACTACTTGACTGTATGTGTTGATAATTGATGCTGCTACATTGTGTCTTTGTCTTGATTTTTTTTTTGTTTTTCTGATTCAAGTGTGCAATGTTTTATTCCGGCGACGTTGTTTGCCGAACTTTCTTTTTCGTCTTCTGATGGCCTTAGTGGAGTTGTGGAGTTGGAAGTGTGAGTTGCGAGTGGAAATGAAAACATTTCCCAAGTAATTATTCTTAGGGATTAACTGGTACCTTATATCTGAACCTGAATTTTAGAATTAGGATATGAGTAACTGGATGATGGGACATCCAATGGGTTTTTCTTCTCCTGCTTTATTTACTTCTCTCCGGAAATGGTACTGTTAGCTTTTTATGCAATCTAATACAACTGAGGGTTATGAATGTCACTTCCTTGATTATGGCACGTATTTACATCAAACGTTTGGTTCCTCCCCGTATAGTGCTAGCTGTTTATTTTTATTTTGTCTTTTTCCAATTCAAGGTGTTTTTAGTCTGGAATGGGCATTTCTCTTTTTCTGTGATAAATCTTTTCATTGATTAGTGGTGGGTCGTGGTGATAAAATGCAGGAGCTCAATTGAATTTGCTCTTTTTGTGATGGCAAATTCACCAGATGTGGATGCAGATGATGACTTTAGTGAGCTCTACAAGGAATACACAGGCCCTCCACGATCCACCACTGTTGTTCCACAAGAGAAGACGAATACAAATAAAAGGTCTCATGCTGGTTCTGATGAGGAGGATGAACCTCGTGATCCCAATGCTGTGCCAACTGATTTTACCAGCCGAGAAGCCAAGGTTTGGGAGGCCAAGTCAAAAGCTACAGAGAGGAATTGGAAGAAGAGAAAAGAGGAAGAAATGATCTGCAAAATATGTGGTGAATCAGGCCATTTTACTCAGGTATTATGGGTACTGTAGAATTTTTATTGATCTCGTAAAGTTATTGCACATACATTTTTCACAGCTAGAGAGATATGAGTTCTATTGTAAAAGTTCACGTGTATCAGGCAGTTTGTTCAATTAGAACACTAAATCTTTTTGAGGGGATGCTATCACTTGTATGTTAGTACCAGACTGAACTCTTAACTTCCTATGAAACAAGTGAAATTCCTTCCTGTATATTAAAACATTGTTGAGCTCATTGCAGTATTTTCCCCTTCTATTTTGTAATTATATTTGTAGTCTTTTGAACTCAAGAGTACAATTATACAACCTATAGTAAGGTCGTTTATTTTATATATTTGTAGTCTTCTTTCAAGTATCTGAAATTTTGTTGCGTATGACATACTGCATGTTAATTTTTAGGATCCATACTTTTGAAGTAGTGAAGTTTATTCAATTGCTGGCTGTTTAATCCTTAGGCAGTCAAGATCAAGAGACTTGGATCTGTCCTTAATTATCCAACTACTCTGTATGTTTTGTTCTCCTACTGGGGGTTTTTCCATTCCTTCGTAGCTTATGAAATTTAAATAACATATGAACTTGCTTATTTGTAATTATACAACTGCCCTGTTATTCATCAAATAAACCTTCACCTTATCTTGAGGCTGAATACATGGCAATAACTGATTCACTACCATCGGCTATGATCCTATTGAAAAAAAACTACCATCAACTGTGAAGGCCCAAGTAGCCTCATGGTTTTGAAGCTACACCTGCACATGTAAATTAACTTTTGTCCCACTTACACCTGTTCTATTGAGTCTGTATACGCAAAATTGCAAAAACCTCAACTAAAATAAATAAATAAATAAATAAAGAAAGAAAGAAAGAAAGAAAGAAAATATATATGAATTGGGACTCAATCATGGAGGCCAAGGTGTAAGAAAGGATTGTTTGTATTCACATCTATGATGGTTCTTCAAGGAAAAATTACTCACCAGATGATTGGTTAGAATATCTCTAATTTTTTTTGGTAGAGTATTCCTAATGATTAGGCATAGAAGCATTATCTTTGCCGAAGCATGGTTTTCCATCCAATACCAACTTGCATGTATACAGAATCCACACATTCACATTGTACACACGTGCGGGTACATGTGTGCAAGGGGAGAAGCGAGATTACAAGAAGTAGAACTACTGGAACTTCTTTATTTGCTTTAAGATCATGACCCTTTCTTCACACAAAAATAGAATTCAAGTGAATTATCACTGTTTTAACTAATGGTACTTACCAATTTTGTTTATTTATAGGGATGCCCCTCAACATTGGGATCAAGTCGTAAATCTCAAGATTTTTTTGAAAGGGTACCAGCCAGGGATAAACACGTGAGAGCAATTTTCACTGATAGAGTAATACAGAAGATAGAAAAGGACGTTGGTTGTAAGATCAAGATGGATGAGAAATTCATAATTGTTAGTGGCAAGGACAGGCTAATTTTGTTAAAGGGATTGGATGCTGTCAACAAGTTAATTAAGGAGGATGGCGATCAAAAGGGTTCTTCTAGTTCTCATATGAGTAGGTCCAGGTCACCGGATCGAAGCCCTGCTGGTTCAAGATCACAACGTTCTGATGTCCATAGATCACATTCTGGTCCTACAAATGCATCACAATTTCAACCTAGGTTTAGCAGACAGGAGAAGGTTGTGGAAAATCGTGCTCGTGATGATTTGCAGAAATATCCAAGGAGCTCGGTTCAAGGTAGGAAAAGCTTAGGATATGTTTACGGCATCAATAGAAAGCTGGTAATTCTATGTTGTAGCTCGTAGTTATCTTTGTTTCTCCATCTTTTTACAAATGATCTTTTTGTTCTTCTTAACAATGTTGTTTGTTGCTTATGTTTGTTTGCAGCACAAGGTAAGTTCTTCTGTTCAAGCTTATGTATGCAACTCTGAAGTAATTTTCACTGATAGGAATTGGTCAGATTGTCTTCAAAACATAATAATTTTATGAACGGGCATCCGGGTTGTTTTTCCTCCTATGGTTTCTTTGTATGATTTTATGATCACGTTGAATTTGACAACATATTGCATTGCTAAATCTACTATTAACATTGCTCTTCCTTTATTTTGAAGCGTATGGCAATGACAGAGTTAGAGGTCGTTCAAGCCACTCAAAGTCTCCAGCTCATCCACCTTATTCTGGCAGCTCGTTTGGTTCATATGATAGTTATCAGAACAAGAATGCATATGGTAGAACTGAAGGATGGGACAATGAGAGAAGAGGATCTGATTTGCAATCTAGTCGTCAGTTCGAGTATCCAGCTTTTCCCCAATCTCTTGAAGAACTGGAGATAGAGTATAAAAGGGAAGCAACTGAACTTGGAAAGATTCGTGATAAAGAAGAAGATGAAGAAAATTATAAAAACCGTGAGGTATGGATCCCCTATCAATGCAATCATTCATCAAATGGAACCTGGTGTATTTTTCCCTTTTTCTATGTTGAGATTTTCCCCCCATTTGGATCTTCTTTACACGATGAATTTCCTACTCTTCGTTATTTTAATTTCAAGTTTGTGCTTTTTACTTATTGTTCTATAAAAAGACTATAAGGGAGATGAGAGAGAGCTACACGAAGAAATTGACTCATTTGAGGGGCACACATGCAAAGCAGTGGGATGAGTTTCTCCAACTTGATGCCCAAAGGCGTCAGCAACAAGTGCACCAGCAAATGGCTGCTTCAGGTTTTGGTGGTTATAAGCAGCATAACTATTCTGAATATGAAGGTGGCTCAGTCAATGCCCATTATGAAGGGGCTAATTTGGCAGCCCTCGATTCAAGAAGCAAGTATCAAAATCACATGGAGAATTATCCTTCAAGACCTCATGGTAATTTTGGGGAGTTTCAACGTCAGAGGCGCGATGATTACGAGAATGCTTACAAACGATACTAATTTGTTAACCAGGAAGTAAGTTGGTAAGTAGTCTAACCCTTCAGCCAAATTAAAAGGATTTTAGTCATCTTCAACTTTTTGGTTTGGCTGTATGATTGGCAATACATAATCTCCATGCCGAATTTCATATTACTCCATAAAGTGCGTGGACTTGAGCCCATGTCCATTAGAAGGTTATTTTGGCGTTCCATGTGCAATCTTAATTTACAGCAAATGGCTCCTTAGCCAGCAATAGCTTTAATTTCATTCCCAAATTTTCAGGATTCAGATCCATCTTGGGTAGGCATAATGCTTGGAGGAACGCCTAATGAAAGGTAAGTATGTATCTTACGGTCTTGGACCAATTAGCATTCAAAGCAGCCTACTACCAGTTGTTTTTATAGTTAAGCTTGATAGTTCATCTGGTTCAGAACTTGTTGTAAAGAGAGGCATGCAATGCCATCTTGGATTTATTAGTCAGATGAAGTTCTCTTGAACGGTTGAGATTTTGAATTGGTTATAAATTGATACCTTGGCAAACTTTTCTTTCTAATGTTTTCCCTATCTAATTGTTGGGAACAAGCGGCATGACTGTATTGAAACAGTCCTTCACTGTCATGGAAGCTCAGGATAGTTGACCGGTTATTAAGTTTAAAAACTGCTTATCACTGCTATTTGGACTTGGAAGTTTTGAATAGTGTACTAGTTGTGATCCGATTATCAATCGGTAAAGCCACACAGTTCACTGGTTATGTTTTATATACTTATCTGAAACTGTGAACTCTTTTCCAAAATCCCACTATGATAACCCATAAACTAAAGGTATGGCTTGGTTCATATGTTTTTGGCTGGGAAATGAATGGATTTTTGATGTAGCAGAAGGGGAATTTCTCGTCTTTAATATTTTGTCTGGTCTTCTTTTTCTTTCTTATTCATATGAAATAGAAATGTCATAGAAGGGTATAGGTTTTCTTAGTTTATAATCTTTAGAAATGACTGTTTTACGTTAAATTTTTGTTTTATCAGAACTGCTTAATTTGAAGAAATGCTTCTGGAAAAGTAGTAAGTAAACGTAAGTAGAAGCGTTTGATTCTACATGATATTGATTAAGATATTAATTTGAAGCTAATGGAAAATATTATACTTGCCAATATCATTCCCCAACTTTATGGTTTTAAACAGATGGCCTGAATCCCTGGGATGACATAATACGCCCCAAAATTGAACCTTTGACTTCTAGAGAGTTCATGCAAATTACGATTGAGTTAAGCTCGTTTATGCATAATACATCTGATTGTTGAGAACGAACTGACTAACTTTTCTTACACATTAAGGTGTTGAAGTTTTGGGTCTTTTCACTAGCCTGCATCGGAATAAATCCATCAGTTGTAATTATTTTGTATGTACTTGTGAAGGCCAGGAAGTGACATGTTTTGATACTAAATAACTGCTTTAACAGGGGTCTTAGTGTGGATTATTGAGGTAAACTAGAAGTTTGGGTTGAGTCTTATCTTAATTATAGTTTGTTAAGTGTTTAGTTGTGTTTTTACAAGTATTGGTGAATTTTGTTGACCTTCTTCAATGGATAGAACCCTTTTATGTGGATAGTACATATTATAGTTATTTTATTTGAAAACAACCTATTTAGATGTTCATGACCAAGAATATTGGATATGTTTGATTATCCTATTTCCCTTTAGATATACAAAGCAAGTGGGGAGAAACGACAGGAATATATTTTGGAACATTCATTTGGAAGATGGGATAGGAACATATATTTATTTTGGTCATGGTGCTAGGAAATCCTAGGAGGACACCTTAACACTTTTGGTGAACTTGTATTTCTATTATTGAAGGTTCCATGTGTGTTTGATTCTAGAAGGTCAAATCTTCCTATATTTTGTGACTAATATCAGGTTTTATTTTATTTATATTTATTATCTAAGGGGTTCGTAGGTTTAGGAAGAGCTTTCCTTACTTTTTCAATTTCAATTCAAACAGGACTTTATTCCTCCGATTTTGCTTTGTACTAGATAATAGTTAGATGTTCTCAAATGATAACGTGAAATATCACTCCCCAAGATAATGAGGTTGCGTATTTTCAAATTTCGATGTCTTAACTTTCAAATGCTTGTACCTATTAGGAAAAACAAGAGACATGGAAATGAGAGGAATTTTGCTTAAAAATTTGATGGAACATATTGGAATTTTGAAATCATTTTGGTATTAGGTCCTTGAGCAGTTTATATCAATTCTCTACGAACTGATACCATGTCTTCTTAGTGCAATTAGTTGTAGGAAAATTTGAATTACAGGACTCGTGATTTTTAATATATTTGGTAATGGTACGCAAGGTTGTTTTGTTTAGCTGAGCATAGCAACCAAAGTCGAGGGGAGGACCCACTACAAACATAAAAAAGGCACTGTTTATTTTAATGAGACGTGGTTACCTCTTTCAAAGTAAAGCATAGCAAATGATTAGCATTGTTATAAAACAATTCCTACTTTTGTCTTATCTTTTAATAAGCATAAATTATTGTCTAGATTAGTTGATCAAACAACCGTTCAATTTCCACTCGGCACGTTTTTGAACTAAAAATGTTTGTTTTTATCAATTTTAACATAATTTAACATGGTTGAATCTTAATTAACATGTATTTCAGGTTAATTAGGAAAAAAACTAAGCTTCATAGAAGAAAAACTTTTTGAACTTCTTATTTGTTTCAAAAGCACTTTAATTTCCTTTTGAAGATGCAATATTTAATTTCCTTTTGAAGATGTAATATACAATCGAAAGGTTAAACTATCTCATCATAGAAAATTGAGATTTGAAATTGTGTGCGAGTCACTTAAAACCAAGAAATGAGAGTTAAAAAAAAATATTGGAAGAGTTTGTTTGGATTCTTAAGAAAAATGTTATTTCTAAAAAGTGGATTATTATTATTTTATAAAGGGTTCAAAATGCATTCAAAATGACTAAAATATTTCTGAATCATTTTGAAAGGCTAAAGTAATATTACATC

Coding sequence (CDS)

ATGGCAAATTCACCAGATGTGGATGCAGATGATGACTTTAGTGAGCTCTACAAGGAATACACAGGCCCTCCACGATCCACCACTGTTGTTCCACAAGAGAAGACGAATACAAATAAAAGGTCTCATGCTGGTTCTGATGAGGAGGATGAACCTCGTGATCCCAATGCTGTGCCAACTGATTTTACCAGCCGAGAAGCCAAGGTTTGGGAGGCCAAGTCAAAAGCTACAGAGAGGAATTGGAAGAAGAGAAAAGAGGAAGAAATGATCTGCAAAATATGTGGTGAATCAGGCCATTTTACTCAGGGATGCCCCTCAACATTGGGATCAAGTCGTAAATCTCAAGATTTTTTTGAAAGGGTACCAGCCAGGGATAAACACGTGAGAGCAATTTTCACTGATAGAGTAATACAGAAGATAGAAAAGGACGTTGGTTGTAAGATCAAGATGGATGAGAAATTCATAATTGTTAGTGGCAAGGACAGGCTAATTTTGTTAAAGGGATTGGATGCTGTCAACAAGTTAATTAAGGAGGATGGCGATCAAAAGGGTTCTTCTAGTTCTCATATGAGTAGGTCCAGGTCACCGGATCGAAGCCCTGCTGGTTCAAGATCACAACGTTCTGATGTCCATAGATCACATTCTGGTCCTACAAATGCATCACAATTTCAACCTAGGTTTAGCAGACAGGAGAAGGTTGTGGAAAATCGTGCTCGTGATGATTTGCAGAAATATCCAAGGAGCTCGGTTCAAGGTAGGAAAAGCTTAGGATATGTTTACGGCATCAATAGAAAGCTGGTAATTCTATGTTGTAGCTCGTAG

Protein sequence

MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERVPARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGDQKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDDLQKYPRSSVQGRKSLGYVYGINRKLVILCCSS

Homology

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BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_011651535.1 (uncharacterized protein LOC101215062 isoform X2 [Cucumis sativus] >KGN58209.2 hypothetical protein Csa_017630 [Cucumis sativus])

HSP 1 Score: 483 bits (1244), Expect = 5.29e-167
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICK CGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKRCGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]

BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_031738009.1 (uncharacterized protein LOC101215062 isoform X1 [Cucumis sativus])

HSP 1 Score: 483 bits (1244), Expect = 5.66e-167
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICK CGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKRCGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]

BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_008447472.1 (PREDICTED: uncharacterized protein LOC103489910 [Cucumis melo])

HSP 1 Score: 480 bits (1236), Expect = 8.67e-166
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]

BLAST of Cucsat.G15441 vs. NCBI nr
Match: KAA0038119.1 (Zinc knuckle family protein isoform 1 [Cucumis melo var. makuwa] >TYK20488.1 Zinc knuckle family protein isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 480 bits (1236), Expect = 2.66e-165
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 34  MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 93

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 94  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 153

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 154 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 213

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 214 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 273

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 274 LQKYPRSSVQ 283

[Close]

BLAST of Cucsat.G15441 vs. NCBI nr
Match: XP_038905439.1 (uncharacterized protein LOC120091471 isoform X2 [Benincasa hispida])

HSP 1 Score: 465 bits (1196), Expect = 1.02e-159
Identity = 238/250 (95.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEE EPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEVEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGS+RKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSNRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRV+QKIEKDVGCKIKMDEKFIIVSGKDRLIL+KG+DAV+KLIKE+GD
Sbjct: 121 PARDKHVRAIFTDRVVQKIEKDVGCKIKMDEKFIIVSGKDRLILVKGVDAVHKLIKEEGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSP GSRSQRSDVHRSHSGPTN+SQFQPRFSRQEKVVENR RDD
Sbjct: 181 QKGSSSSHMSRSRSPDRSPVGSRSQRSDVHRSHSGPTNSSQFQPRFSRQEKVVENRVRDD 240

Query: 241 LQKYPRSSVQ 250
           LQKY RSSVQ
Sbjct: 241 LQKYSRSSVQ 250

[Close]

BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A1S3BHI0 (uncharacterized protein LOC103489910 OS=Cucumis melo OX=3656 GN=LOC103489910 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 4.20e-166
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 181 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 241 LQKYPRSSVQ 250

[Close]

BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A0A0L866 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G535630 PE=4 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 8.37e-166
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 105 MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 164

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICK CGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 165 FTSREAKVWEAKSKATERNWKKRKEEEMICKRCGESGHFTQGCPSTLGSSRKSQDFFERV 224

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 225 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 284

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 285 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 344

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 345 LQKYPRSSVQ 354

[Close]

BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A5D3DAF0 (Zinc knuckle family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00620 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 1.29e-165
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVD DDDFSELYKEYTGPPRSTTVV QEKTNTNKRSHAGSDEEDEPRDPNAVPTD
Sbjct: 34  MANSPDVDGDDDFSELYKEYTGPPRSTTVVSQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 93

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV
Sbjct: 94  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 153

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD
Sbjct: 154 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 213

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMS+SRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD
Sbjct: 214 QKGSSSSHMSKSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 273

Query: 241 LQKYPRSSVQ 250
           LQKYPRSSVQ
Sbjct: 274 LQKYPRSSVQ 283

[Close]

BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A6J1DTF4 (uncharacterized protein LOC111023835 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023835 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 1.54e-157
Identity = 228/252 (90.48%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRST+V  QEKT T KRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTSVTAQEKTKTTKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGS+RKSQDFFER+
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSNRKSQDFFERI 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRA+FTD+V+QKIEKD+GCKIK+DEKFIIVSGKDRLILLKG+DAV+K+IKE+GD
Sbjct: 121 PARDKHVRAVFTDKVVQKIEKDIGCKIKIDEKFIIVSGKDRLILLKGVDAVHKVIKEEGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSP+RSP GSRSQRS+VHRSHSGPTNASQFQPRFSR+EKVVENR RDD
Sbjct: 181 QKGSSSSHMSRSRSPERSPVGSRSQRSEVHRSHSGPTNASQFQPRFSRREKVVENRVRDD 240

Query: 241 LQKYPRSSVQGR 252
           LQKYPR S+Q R
Sbjct: 241 LQKYPRGSLQAR 252

[Close]

BLAST of Cucsat.G15441 vs. ExPASy TrEMBL
Match: A0A6J1DRY4 (uncharacterized protein LOC111023835 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023835 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 3.29e-156
Identity = 228/252 (90.48%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 1   MANSPDVDADDDFSELYKEYTGPPRSTTVVPQEKTNTNKRSHAGSDEEDEPRDPNAVPTD 60
           MANSPDVDADDDFSELYKEYTGPPRST+V  QEKT T KRSHAGSDEEDEPRDPNAVPTD
Sbjct: 1   MANSPDVDADDDFSELYKEYTGPPRSTSVTAQEKTKTTKRSHAGSDEEDEPRDPNAVPTD 60

Query: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSSRKSQDFFERV 120
           FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGS+RKSQDFFER+
Sbjct: 61  FTSREAKVWEAKSKATERNWKKRKEEEMICKICGESGHFTQGCPSTLGSNRKSQDFFERI 120

Query: 121 PARDKHVRAIFTDRVIQKIEKDVGCKIKMDEKFIIVSGKDRLILLKGLDAVNKLIKEDGD 180
           PARDKHVRA+FTD+V+QKIEKD+GCKIK+DEKFIIVSGKDRLILLKG+DAV+K+IKE+GD
Sbjct: 121 PARDKHVRAVFTDKVVQKIEKDIGCKIKIDEKFIIVSGKDRLILLKGVDAVHKVIKEEGD 180

Query: 181 QKGSSSSHMSRSRSPDRSPAGSRSQRSDVHRSHSGPTNASQFQPRFSRQEKVVENRARDD 240
           QKGSSSSHMSRSRSP+RSP GSRSQRS+VHRSHSGPTNASQFQPRFSR+EKVVENR RDD
Sbjct: 181 QKGSSSSHMSRSRSPERSPVGSRSQRSEVHRSHSGPTNASQFQPRFSRREKVVENRVRDD 240

Query: 241 LQKYPRSSVQGR 252
           LQKYPR S+Q R
Sbjct: 241 LQKYPRGSLQAR 252

The following BLAST results are available for this feature:

BLAST of Cucsat.G15441 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15441 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651535.1	5.29e-167	99.60	uncharacterized protein LOC101215062 isoform X2 [Cucumis sativus] >KGN58209.2 hy...	[more]
XP_031738009.1	5.66e-167	99.60	uncharacterized protein LOC101215062 isoform X1 [Cucumis sativus]	[more]
XP_008447472.1	8.67e-166	98.80	PREDICTED: uncharacterized protein LOC103489910 [Cucumis melo]	[more]
KAA0038119.1	2.66e-165	98.80	Zinc knuckle family protein isoform 1 [Cucumis melo var. makuwa] >TYK20488.1 Zin...	[more]
XP_038905439.1	1.02e-159	95.20	uncharacterized protein LOC120091471 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G15441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHI0	4.20e-166	98.80	uncharacterized protein LOC103489910 OS=Cucumis melo OX=3656 GN=LOC103489910 PE=...	[more]
A0A0A0L866	8.37e-166	99.60	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G535630 P...	[more]
A0A5D3DAF0	1.29e-165	98.80	Zinc knuckle family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1DTF4	1.54e-157	90.48	uncharacterized protein LOC111023835 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DRY4	3.29e-156	90.48	uncharacterized protein LOC111023835 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 352..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..498
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..498
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	PANTHER	PTHR34210:SF3	OS01G0252900 PROTEIN	coord: 38..498
None	No IPR available	PANTHER	PTHR34210	OS01G0252900 PROTEIN	coord: 38..498
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 123..138 score: 8.910993
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 110..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15441.T9	Cucsat.G15441.T9	mRNA
Cucsat.G15441.T3	Cucsat.G15441.T3	mRNA
Cucsat.G15441.T1	Cucsat.G15441.T1	mRNA
Cucsat.G15441.T7	Cucsat.G15441.T7	mRNA
Cucsat.G15441.T4	Cucsat.G15441.T4	mRNA
Cucsat.G15441.T13	Cucsat.G15441.T13	mRNA
Cucsat.G15441.T12	Cucsat.G15441.T12	mRNA
Cucsat.G15441.T11	Cucsat.G15441.T11	mRNA
Cucsat.G15441.T10	Cucsat.G15441.T10	mRNA
Cucsat.G15441.T17	Cucsat.G15441.T17	mRNA
Cucsat.G15441.T16	Cucsat.G15441.T16	mRNA
Cucsat.G15441.T15	Cucsat.G15441.T15	mRNA
Cucsat.G15441.T14	Cucsat.G15441.T14	mRNA
Cucsat.G15441.T27	Cucsat.G15441.T27	mRNA
Cucsat.G15441.T25	Cucsat.G15441.T25	mRNA
Cucsat.G15441.T2	Cucsat.G15441.T2	mRNA
Cucsat.G15441.T8	Cucsat.G15441.T8	mRNA
Cucsat.G15441.T6	Cucsat.G15441.T6	mRNA
Cucsat.G15441.T21	Cucsat.G15441.T21	mRNA
Cucsat.G15441.T22	Cucsat.G15441.T22	mRNA
Cucsat.G15441.T23	Cucsat.G15441.T23	mRNA
Cucsat.G15441.T20	Cucsat.G15441.T20	mRNA
Cucsat.G15441.T18	Cucsat.G15441.T18	mRNA
Cucsat.G15441.T5	Cucsat.G15441.T5	mRNA
Cucsat.G15441.T19	Cucsat.G15441.T19	mRNA
Cucsat.G15441.T26	Cucsat.G15441.T26	mRNA
Cucsat.G15441.T37	Cucsat.G15441.T37	mRNA
Cucsat.G15441.T36	Cucsat.G15441.T36	mRNA
Cucsat.G15441.T24	Cucsat.G15441.T24	mRNA
Cucsat.G15441.T30	Cucsat.G15441.T30	mRNA
Cucsat.G15441.T32	Cucsat.G15441.T32	mRNA
Cucsat.G15441.T34	Cucsat.G15441.T34	mRNA
Cucsat.G15441.T31	Cucsat.G15441.T31	mRNA
Cucsat.G15441.T28	Cucsat.G15441.T28	mRNA
Cucsat.G15441.T35	Cucsat.G15441.T35	mRNA
Cucsat.G15441.T33	Cucsat.G15441.T33	mRNA
Cucsat.G15441.T29	Cucsat.G15441.T29	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding