Cucsat.G15379 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTACAAAACAGCTCAAAAATATTCAATATAGTTGCTAGAACTTGCAATAAAGCCGAAAAGTTGAGGATGAAGGAAATCTACAATGAAATGGCTTAGATAAAATATCCACCACAAACTCAGATTATGAGAAATCTAAATCCCCACTCATTTTCCCACAAGCTCTCAAATATCTAGCAATGTTAAACAGGTGGCAGAATACAACTATATAAAAGCTTAGACATCATATGTCGGACATTTTCTTTTACCTGGTTTCACTGGAGGAAGCTCTAAAAGATGGCTGCTTTTGCCTCACTACCCCTAACTTCATCTTCTTTACATCCAGTTGTCCAATTCTCACCTCTTGTATTCTCCTCAAAAGTTGTATATGACCCAAGTTCCTATTGCTTCACAGTCAGATCAATCAGATATGGAAACCAAAAATTTTCCTCTCAGTCCAACCCAAGGAGTTTGATAATTCTTGGGGCAGCAACAAAACAAGCAAAAACACCAGGTATTCTCTTCTCGTTAATCTAATATTTTAACAGGTTTCAGGTAGAAATTTCAATCTTTTTAGTTTTAATTTATTAATACAAAGCTGGGTTTATTCTCGTCTATTTGGAGAATTCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTCTGACTCTCTACCTACAACTTCAGTGTATATTGGATGAGTGGTCAGTTTTATTAATCTAAAACTACAGGCAAACACATCGCACTTGTTTTCGTCATAAAATGCATCCAAAGTATATCGGAAAGGTTAAATTTTGGTCCATAACAAAGGCTGGAGTTTTGTGAAATGAAGTTCTAAAACTTAAAAGCATAATGAGTAGGAATTGGTTTTAGTTCAAAACAAGTAATGATGCTGAACAGAACATGAGAATTAAGACTCTCACCCTTGAGATCTTCACCGCAGGTAAGGAGTGTGGATGCTAATGAAGCTCTGCGCCTTCAAAAGGAAAACAACTTTGTGATTCTTGATGTCAGGCCAGAAGCAGAATTCAAAGAGGTTAGTGGATTAATGTGTGATGATTTGCATTTTTCGTCCAGACCCGAACAACCAATGATTTGGACTAAGCTCACTCTGGTGGACAATCAATGAATTTTTATATCTTATTTCAAGTGTTTTGGTATAGGGCCATCCACCAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACCGAAGAAAACCCAGAGTTCTTGCAAAGTAAGTTACTTGTGAACACCTTCTTCACTTCACTTCTTGTTCTCGAAAGTGAATGCCTGATTATCTTCCTATTTCTACAGGTGTAGAATCTAAAATTGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTACTCAAACTTTTGACAGTAACCTATATGTTTATTACATGCCCCTGACATTCTACAAATATCCCTCTTCATACGGTCAACGGGTAGAACGATTAAAACAAGTTTAAGAATATGAAGAATCAGTAAGCAAGATGAATTTGCTATCAACCATTGTCTCTTCAACTTCTCCATTACTGTCCTCAGTTATGTGATTTGTGTCCAAAATCACATAGTACCTTCTATTTCTTGTTTGAGGTTTAGCTGTTTATTCTCTGCTACAGAGAAAAATGCTAAGCATCAAGTTTTAACTTTGGCCACATTTAACAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGGTACGCCAACGTATTTCACTTAGAAGGTGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAATAAGGTGGTCTCTACAAGATCTTCGGAAGTAAAATAGCTTATCATTTTTGGAGGGTGTCCATTAAAGAGCAGAGCCAAGTTCTCTGGAAATATTTGTTTGGGTTGAGTATTAACCATGACTGCATCGCCAGATTCCAATCTTACCATTTGTGTGCTGAATCAGGATTCACTTTAAATGTACAATTATAAGTTGGACAGTGTAGAAGACTAGATTTGTTTCATAATGGAAATACCACCCACTTCCCATCACTTTTGATGTTTGGTTTGTAATGAAAAATGTGTGTGCATAACTTTTCCGCTTGATTGCTGAAGCTGATATCAATTGCAAATAAATCTGTTTGGCTTTATTGTAAGGTAGAAGGTTGAATTATAAAATTATCAATACAACCCGGCTAT ATGGCTGCTTTTGCCTCACTACCCCTAACTTCATCTTCTTTACATCCAGTTGTCCAATTCTCACCTCTTGTATTCTCCTCAAAAGTTGTATATGACCCAAGTTCCTATTGCTTCACAGTCAGATCAATCAGATATGGAAACCAAAAATTTTCCTCTCAGTCCAACCCAAGGAGTTTGATAATTCTTGGGGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTAAGGAGTGTGGATGCTAATGAAGCTCTGCGCCTTCAAAAGGAAAACAACTTTGTGATTCTTGATGTCAGGCCAGAAGCAGAATTCAAAGAGTGTTTTGGTATAGGGCCATCCACCAGGTGCCATTAA MAAFASLPLTSSSLHPVVQFSPLVFSSKVVYDPSSYCFTVRSIRYGNQKFSSQSNPRSLIILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKECFGIGPSTRCH Homology
BLAST of Cucsat.G15379 vs. ExPASy Swiss-Prot
Match: Q94A65 (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 9.2e-62 Identity = 124/177 (70.06%), Postives = 140/177 (79.10%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07 Identity = 31/109 (28.44%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.5e-06 Identity = 34/117 (29.06%), Postives = 62/117 (52.99%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.7e-04 Identity = 34/106 (32.08%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of Cucsat.G15379 vs. NCBI nr
Match: XP_004146237.1 (rhodanese-like domain-containing protein 14, chloroplastic [Cucumis sativus] >KGN57646.1 hypothetical protein Csa_011416 [Cucumis sativus]) HSP 1 Score: 394 bits (1012), Expect = 1.57e-137 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Cucsat.G15379 vs. NCBI nr
Match: XP_008456000.1 (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis melo]) HSP 1 Score: 377 bits (967), Expect = 1.13e-130 Identity = 191/200 (95.50%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of Cucsat.G15379 vs. NCBI nr
Match: XP_038882948.1 (rhodanese-like domain-containing protein 14, chloroplastic [Benincasa hispida]) HSP 1 Score: 375 bits (963), Expect = 4.61e-130 Identity = 193/200 (96.50%), Postives = 193/200 (96.50%), Query Frame = 0
BLAST of Cucsat.G15379 vs. NCBI nr
Match: KAA0050538.1 (rhodanese-like domain-containing protein 14 [Cucumis melo var. makuwa]) HSP 1 Score: 379 bits (972), Expect = 8.65e-129 Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Cucsat.G15379 vs. NCBI nr
Match: TYK11271.1 (rhodanese-like domain-containing protein 14 [Cucumis melo var. makuwa]) HSP 1 Score: 379 bits (972), Expect = 8.65e-129 Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy TrEMBL
Match: A0A0A0LC69 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238120 PE=4 SV=1) HSP 1 Score: 394 bits (1012), Expect = 7.61e-138 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy TrEMBL
Match: A0A1S3C2W7 (rhodanese-like domain-containing protein 14, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496057 PE=4 SV=1) HSP 1 Score: 377 bits (967), Expect = 5.48e-131 Identity = 191/200 (95.50%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy TrEMBL
Match: A0A5A7U5J4 (Rhodanese-like domain-containing protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001880 PE=4 SV=1) HSP 1 Score: 379 bits (972), Expect = 4.19e-129 Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy TrEMBL
Match: A0A5D3CHJ7 (Rhodanese-like domain-containing protein 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001270 PE=4 SV=1) HSP 1 Score: 379 bits (972), Expect = 4.19e-129 Identity = 192/200 (96.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Cucsat.G15379 vs. ExPASy TrEMBL
Match: A0A6J1J8V6 (rhodanese-like domain-containing protein 14, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482801 PE=4 SV=1) HSP 1 Score: 369 bits (946), Expect = 8.69e-128 Identity = 187/200 (93.50%), Postives = 193/200 (96.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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