Cucsat.G15191 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15191
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	UPF0769 protein C21orf59 homolog B-like
Location	ctg197: 583830 .. 586535 (+)
RNA-Seq Expression	Cucsat.G15191
Synteny	Cucsat.G15191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAGATATTGACCATTTTAGACTTACGAATATATTTGACTCCGAATTAACTTCTTTTACATTTTCTTTTTCTTAGTTTCCAGTGAGTACAACACAAATACAAACAGTTCCCGGCGAAGCCTAAAAAATGGTGAGAGTTCACGTCAAGTCCGGCCACGATTCCTGCGAATTCGAGTTTCTTTACGAGTGTCAGAGCGACTTATTGATCGATGAAATTGCTTCGGAAGTTATTCAAATCTTCAATCTCCAATCTAAAATTCATCGGCTTATTTCAGAATTCGAACCCCTTCTACTTCCCTTTAGTGGCGATCCCAAAGGTTTGAATATTAGCAATCCGGACTAATAATTTCTATTTTACTCGTTACTCTTTCTTTCTCTTTTGTAATCATCTTACGCTCATCGATTCTCTGATGGATGTGATATGAAGCTACGTCTCTTTTGAGAGCTTTCTCAGAAGCAAAGTCCTACGCATCTAAGGTTTCACTCTCTATTCCCCTTTTCGTGTTTTGATAATGAGATAATCGATGAGAGTTCTGTTGTTTAGTAAACCTAGTAAATACGATTCATTGTGATTGTTTTGCATTTTCTCATGAATAAACTGTTGTTATAGCATAGGAAGTAGAATTGTGTTCATTTAGAGAAGGGAATGTTGTAATTATTAGTCTATTCTTTTGCATCTTTTCATTGATTGATTTCGATTTTCTCACTACAGGACATGGTTATCCACAATAGGCCTTTATCATTTCTTGTGTTGAGACACCATTTTGAGACTATTGAAAGAGAATTGGTAGCAAAGTTTGATATATTGGGTGTCTATGATTCCACTCAGTATCAACAACTTTCATCAGGTATTTGAGATTTTCTTCCTATCTTTTCTTGTTTTTCTTTTTCGTTACTTCTTAAATAACAACAGTATTACCGTCCATTACTCTAAAGTTGTATGTAACTAACTGTTCTTCTGCATTACCTTGATGGTTCTGAAAGATATTTTTCTCTGTCACATAATGTTTTTCTATAGAGATTTTATTTTGGGTTCATTAGTAATTAGCTAGAAAAGTCATTTGGGAGATTGGTTATGAATAGAGCGAGCGAGAAGGATGGGGGTATTATTTTAGTTGGTGAATTAAAGATCTCAAGAGTAGAGGTGCAAGTATCTTGATTTACTTGTTTATCCTTTGAGTTCTTTACCTTTTGTACCACAGTACATTGTGGCTATGTTTAGATTCGTAGTAGTTCTATATTACTCGAATTATTAATCAAGATCCCACGTCGAATTTGTTTGGGGTTTGAACTGATAAACATTATCTCAACTAAAGATGTGCGTTCAAATATAAACTTTTGTGTTATACATGCTAACATGAAGAAATACAACATTAAAACCTGGTCTGGTTCACACAGATTCCTCAAAAGGAAATAGAATATTAACTTTCCAAGGAAAATTATGTCAGTTTTCTAGGAAAAGACCTGTCTTGAAACTATCTTTTACAATAAATTGAAATATATGGGTGTTCGGTGACCCATAATGTGATAGGTTTGTAATGTAATATAATAAAAAATCATGTTTGGATTGAGCGTTTTGAGCCCGATTTGTGATACAAAACTCATTCTATTTCGACAGTTTTCAGTCCAACCATCTTTCTCACTGTTTTTATGTTTGACGATCTCATTTTCGTTTTGTCTTTTAGATTACTTACGCTTTCTAACACTTATTTGATTCTCAGTAATTCAAATTACATTCCAGCTCTCCAAACACCTAGATTATCCCCATGTATTCAAGATAATTGGAATCTTTCCTCTCTCGAGATGCCAATCAGCCTCAAAACTGTTTACTTGTCTACCCTCATTTCTTCCCTTTCCTCTCACTGAATCTATAACAATTTCCCATGAACTCCTTTGCTCAATACTAATATATCCTTAAGGTATTCCAACTTCTATCTAAATAACATTCGTATCTGCTCTTTGATAAGGTTGTACTTGGTGACGAATAGATCCATTCACTCATCATTGTCAATCTTCTAAAACTGTTCCTCAGAAAGAAAGTTGCTTTGTTTTAGATCAACCTTATAATTCTTGATGAAGGTGACTAGAAACAAGATTATCTATTATATCTTCGTTCAGATGTCGGCCTTCTTGACAAGGATACGACTCAGCTAAAACTAGCAGGAAAAGAGCTCATGAAGGAGAAACAACTCTGCGATTATATTGGAAGAAATGAGAAAACTAAGGTATTTTGTCATTGGGTTTGTTCCTTCGTTTGTTTTTTTCATATAGATGACCAATTGCTCCAATTATCTATTATCAGATCGTTCTTAAACTACAACCGAAAATTACACCCCCAAGTTGAATACTGATGCAATCTGTCAGCTATGAGTGCAACGTGCTTGACGAACCTGCTCGAGTTCAAATTCCTGCTATTATGTGAAAATTTTGAGATTTGATAGTAATGGGATATATGGAAAAGTGGACAAGATTTTGGACGTGAGAAAGCAGATAAGATCTCAATATTTTAGTTTGATATATGATATGTTGAATATCATAATCCTTATATCATCAATGTGTTATCTCTATCTTCTGTTTGAGTAACCGATCCTATGTTTGGGTTGTAAATTTGTTGGATTTAAACCATTCGCATAGCATTATTTTGGTTGAGTTCTTTAAATTTAAGCCAAAAAAAATGGTGAAAAGAAAACGTTAATATCTAAGCATTTATTTTCTTAATATTGAAACTCAAGTTATCATTTTCTT

Coding sequence (CDS)

ATGGTGAGAGTTCACGTCAAGTCCGGCCACGATTCCTGCGAATTCGAGTTTCTTTACGAGTGTCAGAGCGACTTATTGATCGATGAAATTGCTTCGGAAGTTATTCAAATCTTCAATCTCCAATCTAAAATTCATCGGCTTATTTCAGAATTCGAACCCCTTCTACTTCCCTTTAGTGGCGATCCCAAAGCTACGTCTCTTTTGAGAGCTTTCTCAGAAGCAAAGTCCTACGCATCTAAGGACATGGTTATCCACAATAGGCCTTTATCATTTCTTGTGTTGAGACACCATTTTGAGACTATTGAAAGAGAATTGGTAGCAAAGTTTGATATATTGGGTGTCTATGATTCCACTCAGTATCAACAACTTTCATCAGGTATTTGA

Protein sequence

MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSGDPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQYQQLSSGI

Homology

[Close]

BLAST of Cucsat.G15191 vs. NCBI nr
Match: XP_004143588.1 (cilia- and flagella-associated protein 298-B isoform X2 [Cucumis sativus] >KGN50501.1 hypothetical protein Csa_000186 [Cucumis sativus])

HSP 1 Score: 249 bits (637), Expect = 1.16e-82
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG
Sbjct: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY
Sbjct: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120

Query: 121 QQLSS 125
           QQLSS
Sbjct: 121 QQLSS 125

[Close]

BLAST of Cucsat.G15191 vs. NCBI nr
Match: XP_031740867.1 (uncharacterized protein LOC101218784 isoform X1 [Cucumis sativus])

HSP 1 Score: 249 bits (637), Expect = 1.99e-82
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG
Sbjct: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY
Sbjct: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120

Query: 121 QQLSS 125
           QQLSS
Sbjct: 121 QQLSS 125

[Close]

BLAST of Cucsat.G15191 vs. NCBI nr
Match: XP_008461611.1 (PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis melo])

HSP 1 Score: 221 bits (562), Expect = 3.00e-71
Identity = 110/124 (88.71%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 2   VRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSGD 61
           +R+HVKSG DSC+ EFLYEC SD LI+EIASEVIQIFNLQSKIHRLISEFEP LLPFSGD
Sbjct: 1   MRLHVKSGDDSCQNEFLYECHSDSLIEEIASEVIQIFNLQSKIHRLISEFEPRLLPFSGD 60

Query: 62  PKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQYQ 121
           PKAT LLRAFSEAKSYASKDM+IHNRPLSFLVLRHHFETIERELVA FD LGVYDSTQYQ
Sbjct: 61  PKATPLLRAFSEAKSYASKDMIIHNRPLSFLVLRHHFETIERELVANFDTLGVYDSTQYQ 120

Query: 122 QLSS 125
           QL S
Sbjct: 121 QLLS 124

[Close]

BLAST of Cucsat.G15191 vs. NCBI nr
Match: XP_038891954.1 (cilia- and flagella-associated protein 298-like isoform X1 [Benincasa hispida])

HSP 1 Score: 210 bits (534), Expect = 8.70e-67
Identity = 106/126 (84.13%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVR+HVKSG DS E EFLYECQSD LI EIAS+VIQIFNLQSKIHRL+SEFEP LLPF G
Sbjct: 1   MVRIHVKSGDDSGENEFLYECQSDSLIKEIASDVIQIFNLQSKIHRLVSEFEPRLLPFHG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPK T LLRAF EAKSYASKDMVIH+RPLS+LVLRHHFETIERELVAKFD+LG  DSTQY
Sbjct: 61  DPKVTPLLRAFWEAKSYASKDMVIHDRPLSYLVLRHHFETIERELVAKFDLLGDSDSTQY 120

Query: 121 QQLSSG 126
           QQ+ SG
Sbjct: 121 QQILSG 126

[Close]

BLAST of Cucsat.G15191 vs. NCBI nr
Match: XP_038891955.1 (cilia- and flagella-associated protein 298-B-like isoform X2 [Benincasa hispida])

HSP 1 Score: 207 bits (528), Expect = 4.67e-66
Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVR+HVKSG DS E EFLYECQSD LI EIAS+VIQIFNLQSKIHRL+SEFEP LLPF G
Sbjct: 1   MVRIHVKSGDDSGENEFLYECQSDSLIKEIASDVIQIFNLQSKIHRLVSEFEPRLLPFHG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPK T LLRAF EAKSYASKDMVIH+RPLS+LVLRHHFETIERELVAKFD+LG  DSTQY
Sbjct: 61  DPKVTPLLRAFWEAKSYASKDMVIHDRPLSYLVLRHHFETIERELVAKFDLLGDSDSTQY 120

Query: 121 QQLSS 125
           QQ+ S
Sbjct: 121 QQILS 125

[Close]

BLAST of Cucsat.G15191 vs. ExPASy TrEMBL
Match: A0A0A0KS44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177690 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 5.63e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG
Sbjct: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY
Sbjct: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120

Query: 121 QQLSS 125
           QQLSS
Sbjct: 121 QQLSS 125

[Close]

BLAST of Cucsat.G15191 vs. ExPASy TrEMBL
Match: A0A1S3CF44 (UPF0769 protein C21orf59 homolog OS=Cucumis melo OX=3656 GN=LOC103500174 PE=3 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.45e-71
Identity = 110/124 (88.71%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 2   VRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSGD 61
           +R+HVKSG DSC+ EFLYEC SD LI+EIASEVIQIFNLQSKIHRLISEFEP LLPFSGD
Sbjct: 1   MRLHVKSGDDSCQNEFLYECHSDSLIEEIASEVIQIFNLQSKIHRLISEFEPRLLPFSGD 60

Query: 62  PKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQYQ 121
           PKAT LLRAFSEAKSYASKDM+IHNRPLSFLVLRHHFETIERELVA FD LGVYDSTQYQ
Sbjct: 61  PKATPLLRAFSEAKSYASKDMIIHNRPLSFLVLRHHFETIERELVANFDTLGVYDSTQYQ 120

Query: 122 QLSS 125
           QL S
Sbjct: 121 QLLS 124

[Close]

BLAST of Cucsat.G15191 vs. ExPASy TrEMBL
Match: A0A6J1GZ65 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111458205 PE=3 SV=1)

HSP 1 Score: 199 bits (507), Expect = 3.55e-63
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVRVHVK G DS   EFLYECQS+LLI+E+ SEV+QIFNLQS+IHRL+SE +P LLPF G
Sbjct: 1   MVRVHVKPGDDSGGNEFLYECQSNLLIEEVTSEVVQIFNLQSQIHRLVSELQPRLLPFYG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPKAT LLRA SEAKSYASKDMVIHNRPLS+LVLRHHFETIEREL AKFD+LGV  ST Y
Sbjct: 61  DPKATPLLRALSEAKSYASKDMVIHNRPLSYLVLRHHFETIERELAAKFDLLGVSGSTHY 120

Query: 121 QQLSS 125
           QQL S
Sbjct: 121 QQLLS 125

[Close]

BLAST of Cucsat.G15191 vs. ExPASy TrEMBL
Match: A0A6J1JQP0 (UPF0769 protein C21orf59 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111488970 PE=3 SV=1)

HSP 1 Score: 189 bits (480), Expect = 4.56e-59
Identity = 95/125 (76.00%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVR+HVK   DS   EFLYECQS+LLI+E+ SEV+ IFNLQS+IHRL+SE +P LLP  G
Sbjct: 1   MVRIHVKPCDDSGGNEFLYECQSNLLIEEVTSEVVHIFNLQSQIHRLVSELQPRLLPLYG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           DPKAT LLRA SEAKSYASKDMVIHNRPLS+LVLRHHFETIEREL AKFD+LGV   T Y
Sbjct: 61  DPKATPLLRALSEAKSYASKDMVIHNRPLSYLVLRHHFETIERELAAKFDLLGVSGFTHY 120

Query: 121 QQLSS 125
           QQL S
Sbjct: 121 QQLLS 125

[Close]

BLAST of Cucsat.G15191 vs. ExPASy TrEMBL
Match: A0A6P6G1N7 (uncharacterized protein LOC107413572 OS=Ziziphus jujuba OX=326968 GN=LOC107413572 PE=3 SV=1)

HSP 1 Score: 129 bits (324), Expect = 7.21e-36
Identity = 64/126 (50.79%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60
           MVR+H K G  S + +FLY+C S   IDEIA E+ +I NLQ+KI  L+ E EPLLLPF G
Sbjct: 1   MVRIHAKHGQTSDQIQFLYDCASSSRIDEIALELTRISNLQAKIQALVLELEPLLLPFHG 60

Query: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120
           D  A  L+RA SEA SYASKD V++N+PLS+  LR H + I +EL     +LG  D  Q+
Sbjct: 61  DANALPLVRALSEANSYASKDQVVYNKPLSYYALRDHVQCIAKELSTVSPLLGFSDLDQF 120

Query: 121 QQLSSG 126
           +++ +G
Sbjct: 121 RRILTG 126

The following BLAST results are available for this feature:

BLAST of Cucsat.G15191 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15191 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143588.1	1.16e-82	100.00	cilia- and flagella-associated protein 298-B isoform X2 [Cucumis sativus] >KGN50...	[more]
XP_031740867.1	1.99e-82	100.00	uncharacterized protein LOC101218784 isoform X1 [Cucumis sativus]	[more]
XP_008461611.1	3.00e-71	88.71	PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis melo]	[more]
XP_038891954.1	8.70e-67	84.13	cilia- and flagella-associated protein 298-like isoform X1 [Benincasa hispida]	[more]
XP_038891955.1	4.67e-66	84.00	cilia- and flagella-associated protein 298-B-like isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G15191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS44	5.63e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177690 PE=3 SV=1	[more]
A0A1S3CF44	1.45e-71	88.71	UPF0769 protein C21orf59 homolog OS=Cucumis melo OX=3656 GN=LOC103500174 PE=3 SV...	[more]
A0A6J1GZ65	3.55e-63	80.00	UPF0769 protein C21orf59 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JQP0	4.56e-59	76.00	UPF0769 protein C21orf59 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111488...	[more]
A0A6P6G1N7	7.21e-36	50.79	uncharacterized protein LOC107413572 OS=Ziziphus jujuba OX=326968 GN=LOC10741357...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021298	Cilia- and flagella-associated protein 298	PFAM	PF11069	CFAP298	coord: 136..170 e-value: 1.3E-10 score: 41.6
IPR021298	Cilia- and flagella-associated protein 298	PANTHER	PTHR13238	PROTEIN C21ORF59	coord: 1..173
None	No IPR available	PANTHER	PTHR13238:SF0	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 298	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15191.T4	Cucsat.G15191.T4	mRNA
Cucsat.G15191.T6	Cucsat.G15191.T6	mRNA
Cucsat.G15191.T11	Cucsat.G15191.T11	mRNA
Cucsat.G15191.T10	Cucsat.G15191.T10	mRNA
Cucsat.G15191.T13	Cucsat.G15191.T13	mRNA
Cucsat.G15191.T12	Cucsat.G15191.T12	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003352	regulation of cilium movement