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Cucsat.G15049 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAATCCCCACCAACAACAATAATTAACAAAAAAATCTAAAAAAAAGAATAACAAACAAACACCAATCATCAATTCCCTTTTCTCTATTTTCTCTCGATTCTTAAACCATCTCTCAACAAATCTATCAAACCTTGCATGTAACCCACTTTCTTCCATTTCAGTTAAAAAACAAAAAACCCCCCACCAAACCAAAACCAAAACCGAATCCAACTTATTCTTTGTTTTTGTTTTTTTTTCATGTTCTAATTGTGGAAGTTTGATTCAGCTTTAGGCTCCTTTTGTCCTTTGTTCTTTTTCTATGAACTTTGTTTTTTCAGGTCAGTCAAGATTGCTGGTTTGTTCTCTCTCGTTTATTCTATCAAAAGATTCATCAAAAAGCTGAAGATGGTACGAGAAATGGAACAAGATGAAGAGAATTACAGGTCCAAATTGTTCCATTTCAAAGCAATGCAGGAGAATAATAATGCAACCAAACACTCCAAAAGCTTGAGCATGGAGAGTGCAAGTGTCCTGTTTTCTTCAGATAATAATGATTTGTTTTCCAACAGAAGTCAGGGATCGACTCCGACAAGCGATAACGTTTCCGACAAACCTCCAATGAATCGACAAGACAAAGGGCCTAAAGCTAAGCTTTCCAGAGATGATGCTGCAATCAAACAGCCTAAAGATCAGCCACCAACAGGTTCTCAAATATATATATATATATTTTTTCCCTGTTTTTGGAATGCTTGATGATGTTTGGAGTGGAGATTTTGATTCAAATGATATTGAGAAAAGGATAATGGGCATCCTAGAGAAGTAATTGAATTAATAAACTATAGCTTTTTACTACTCAAATGAAGTTGTGAACATCATTATTGATATTTTTATTCATATGGTTGACATTTCCATTACATCTTGGAGAGAGAATTTTCTCAACGTTTCAATGTCGAATCCTGAAATTAAACTCAGAAATGGATTTGAGCCATTTAATTGCATATGAAAAGTCAACCTATATTATTGTTTGCAGCATTTTTGTTTTGTATGAATTAAAAGACCATTTTTGAGCTTGGTTTGAAAATTTTCTGTTCTTGGATATGATCAGAAACAGAACAGATGAAGGAGCGGTTTGCTAAGTTGCTTTTGGGTGAAGATATGTCTGGTGGAGGAAAGGGTGTTTCATCGGCTTTAGCATTGTCGAATGCAATTACAAATCTTGCAGGTACGTCGTCGTGTATTGATCTTCTGTTTTCTGTCAAGAATTACAATGACTTTGGTTTTACTGTCTTTTC ATGGTACGAGAAATGGAACAAGATGAAGAGAATTACAGAAGTCAGGGATCGACTCCGACAAGCGATAACGTTTCCGACAAACCTCCAATGAATCGACAAGACAAAGGGCCTAAAGCTAAGCTTTCCAGAGATGATGCTGCAATCAAACAGCCTAAAGATCAGCCACCAACAGAAACAGAACAGATGAAGGAGCGGTTTGCTAAGTTGCTTTTGGGTGAAGATATGTCTGGTGGAGGAAAGGGTGTTTCATCGGCTTTAGCATTGTCGAATGCAATTACAAATCTTGCAGGTACGTCGTCGTGTATTGATCTTCTGTTTTCTGTCAAGAATTACAATGACTTTGGTTTTACTGTCTTT MVREMEQDEENYRSQGSTPTSDNVSDKPPMNRQDKGPKAKLSRDDAAIKQPKDQPPTETEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNLAGTSSCIDLLFSVKNYNDFGFTVF Homology
BLAST of Cucsat.G15049 vs. ExPASy Swiss-Prot
Match: Q9SVQ3 (Rop guanine nucleotide exchange factor 9 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF9 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.6e-12 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy Swiss-Prot
Match: F4J1G1 (Rop guanine nucleotide exchange factor 13 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF13 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.3e-11 Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy Swiss-Prot
Match: Q93ZY2 (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11 Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy Swiss-Prot
Match: Q9LV40 (Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF8 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy Swiss-Prot
Match: F4K295 (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of Cucsat.G15049 vs. NCBI nr
Match: XP_004150349.1 (rop guanine nucleotide exchange factor 12 isoform X2 [Cucumis sativus]) HSP 1 Score: 179 bits (455), Expect = 2.33e-51 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Cucsat.G15049 vs. NCBI nr
Match: XP_008447514.1 (PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X2 [Cucumis melo]) HSP 1 Score: 170 bits (430), Expect = 1.08e-47 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Cucsat.G15049 vs. NCBI nr
Match: XP_011651499.1 (rop guanine nucleotide exchange factor 12 isoform X1 [Cucumis sativus] >KAE8650730.1 hypothetical protein Csa_023418 [Cucumis sativus]) HSP 1 Score: 159 bits (402), Expect = 2.39e-43 Identity = 96/138 (69.57%), Postives = 96/138 (69.57%), Query Frame = 0
BLAST of Cucsat.G15049 vs. NCBI nr
Match: KAA0050788.1 (rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 149 bits (377), Expect = 7.99e-40 Identity = 90/138 (65.22%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of Cucsat.G15049 vs. NCBI nr
Match: XP_008447513.1 (PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X1 [Cucumis melo]) HSP 1 Score: 149 bits (377), Expect = 9.41e-40 Identity = 90/138 (65.22%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy TrEMBL
Match: A0A0A0L8F7 (PRONE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G483820 PE=4 SV=1) HSP 1 Score: 179 bits (455), Expect = 8.72e-52 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy TrEMBL
Match: A0A1S3BH13 (rop guanine nucleotide exchange factor 12-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489945 PE=4 SV=1) HSP 1 Score: 170 bits (430), Expect = 5.24e-48 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy TrEMBL
Match: A0A5A7U6A7 (Rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00390 PE=4 SV=1) HSP 1 Score: 149 bits (377), Expect = 3.87e-40 Identity = 90/138 (65.22%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy TrEMBL
Match: A0A1S3BII1 (rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489945 PE=4 SV=1) HSP 1 Score: 149 bits (377), Expect = 4.56e-40 Identity = 90/138 (65.22%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of Cucsat.G15049 vs. ExPASy TrEMBL
Match: A0A5D3CBI9 (Rop guanine nucleotide exchange factor 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001010 PE=4 SV=1) HSP 1 Score: 147 bits (372), Expect = 1.93e-39 Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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