Cucsat.G14816 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G14816
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transcription factor ICE1-like isoform X1
Location	ctg1869: 5335929 .. 5337765 (+)
RNA-Seq Expression	Cucsat.G14816
Synteny	Cucsat.G14816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATATTCAATGGTAAAATAATGGAAAAATGAAATTAAAAAAAGAAAAAAAATAGAAAAACAAAAAGATAATGCCCTTTTCATTCTGCAACCTTCCTCTTTCCTTCTCTTCAATTTTCTCTCCATCTTCTTCTTTAAACTTTCTCTCTCATTTCCCTCTCCACCTCACTGCACTTATCTCTTTCTGTCAGTTTTCCTCCATTTCTTTTCCCATTCCCAATAAACTCTTTTCCTAACCCAAACCTCCAGAAAAATTTAAAAACAAAAAACTACTCTTCAACCTCATACTCATCATCACCTTCTTCTTCACCATGCTTTCCAGAGTTGGGAACGTTCTTTGGATGGAAAATCGGGACGATGAAGACTCATCTTCCTGGACTAAAAACAACACCGACCACAATCATCTCAACCACCCTGTTAATTGCTCTGTTTTGAACAACAAAGACGAAATCACCTCCCTCTCTACCTTCAAATCCATGCTTGAGGTTGAAGATGACTGGTGTATCTCTGCTAATGCTCTCCATAACCATAACCACCACACCGACATCAATGACATTACCTTCTCTCAAAATTTCACCGACCCACCTGATAATTTGTTGCTCCCCCCTGGAGATTCCTCCTCTTCTTGTTCCCCTTCTTCTTCTGTGTTTAATAACATTGACCCATCTCAATTGCGTTTCTTCTTACCTCCAACTCGCACTTTGTCTTCACTTCATAAGGTAGTTTCTAACAACCCTTTAGACCATGGCTTCGATTTGGGAGCAGAGGTTGGGTTTCTTGACGTCCAAGCTTCAAATGCTTCGACTCTGCTCAACGATGGAGGTGGGTTATTAACTGGGTTCACTGATTTAAGCCCAACTAGTCAGATGAACACTCCTAGTTTGTGCTTAGGTTCTCAATTGACAGCACAAAACGTGGCCCCAATGAGTGATAATTGTTCGGGATTAGCTGGATTTCAGAGTTTTGATGAGAATTTGGGAAATGCTCTGCTTTTGAATCGGTCTAAGCTTTTGAGACCACTTGAATCTTTTCCCTCAGTGGGAGCTCAGCCGACTCTTTTCCAGAAGAGGGCTGCTCTAAGGAAGAGTTTAGCTGATAAGGGAAGCAGTTTGGGGGTTTTGAGCCCCGATGGCGGCTGGTTTTCAAATAGGATTGAAGGGGGGATTGGGAAAAATGAAATGGGTGAAGAAAATGGGAAGAAGAGGAAAATGGTTTATGCAGATGAATTGCAAGATACTAGCATCGATACATCCCGTTTCAATTACGATTCTGATGACTTTACCGAGAATACTAACACTAAATTGGATGAGAGTGGTAGAAATGTTGGAAATACATCTAACGCCAATAGTACAGTAACCGGCGGCGACCAGAAGGGGAAGAAAAAAGGACTTCCAGCGAAGAATTTAATGGCCGAGAGACGCCGGAGGAAGAAGCTCAATGATAGGCTGTACATGCTGAGGTCCGTTGTTCCAAAAATCAGCAAAGTAAGAATGAATTTCTTGCCATTATCTTTGTTTCTCGCTAGTTTCATATATTGGTATTTCACGTGATATTCTCGCATTCTCAGATTCACAAGATCATAAGAACATCCCCCCTTTCTTTTAACCAAAAGCCTCGTTTTTTAACTGCTGCAAAATTGCTTCAAATTCATATGACTGATTGCAACTCATTCCACATCTTGGTATTTCTATATTTCATAAATGGAGATGTGGGTGATGCGTGAATATAGGCCACTTGAATGTCTAAGTCCACTAGTAAAGAATGTTATTCTTTTGTCGTGCTCTATCAAGAAACAGGGACTTTGAAAACATGGCTTGTCCTCTTTCTCTTCGTTCTTGTTCTTATTTCTAATTGAGTTCCGATAACGCTCTGTTTCCCTCAGCTGGCTGCATCAATCGTGTTAGTATTCATTTGGATTCTCAGTTTGAGATTTCAAACTTGGTTCCTAATGAAGTATAGGTTAGTCTCATTTTCATTTTGTCATGCTCTCAGTTTAAACTTGCTTATCTCTATGCTTCCTTTCCCCCACTCCCTATCAATATGGACAAAACAAAAGGATCTATACTTGGACGATGAACTGTATTATCAATGAACAGAGTTGGAAAGGTGAAAGCAGCTCTCATTGACTTTCTTTCTTTTGGATCTATATATTAAGGGAATATTCTGAGTGGTTCTTATTCTCTTAGTATTGGTCTTTTAACCTACATTGAACTAAATTTATTTTGACATCTCCGAGAAATTCTTGTAATCATGTAAGTAAGAATTCGTTATAAAGTTGCTTTCAAGATTCTGTACTCTTTTTGCTGTTTGGCTTCATAGAGTTAAACATAACGCAATGTAATGTAAAGTTTTCCCTTTGGTAATGACTAGATGGATAGAGCTTCAATTCTTGGAGATGCAATTGAGTACTTGAAGGAATTACTGCAAAGAATCAACGACCTCCATAATGAATTGGAGTTTTCTCCTTCTGGGGCAGCCTTGACGCCAGGTGCAAGCTTCCATCCCTTGACTCCAACACCACCAAGCCTCTCGAGTCGTATAAAGGAGGAGCTTTGTCCTACCTCATTTCCCAGCCCAAACGGCCAACCTGCAAGGGTAAATATATTCCTGATCTTGGAGCAACTTTGCTTTGCCCTTCAAATGATCCAAGATTCTAGCATTTTGCAATTGTATTATATGCTATGACCGTGTCATGAAGAAAACATTGATGGTATTACTGTACTAATAGGTCGAAGTTAGAGTACGAGAAGGACGTGCAGTAAATATACACATGTTTTGTGGCCGCCGACCGGGTCTCTTGCTCTCTACAGTTAGGGCATTAGATAATCTTGGACTGGATATCCAACAGGCTGTGATTAGCTGCTTTAATGGTTTTGCTATGGACATTTTTCGAGCAGAGGTGAGAGATTCTGTTTGACATTCACTTAATTCTTTTGTTTACCATTTATTCATTCATACTCGATGACATGACTTGACCCTTAAAGACTTATGACTGATAAAGAGTACATATTTTTCAGCAATGCAGCGAAGGTCAAGATGTCCATCCTGAGCAAATAAAAGCAATATTATTGGATTCAGTTGGCTTCAATAGTGCCACATAAATATCTGCTAGACAAGTAAAGAATACTTGTCCTTTGACAAACTGAACCATTTCAATCAGATTCTACCTTGCTTTTTTTTCTTCTTAGGCTGAGTTCTCTGTTGTTCATCAAGTAATTGACTCCATTGTTGACTCAGAAGTAAAATCTTCTGGAATATTATGTGCATTGACTTGTTGTTGAGATGATTGTCACAATTTAAAGTTGCGGTTTGTGTAACTATTCCATGTTTCAGAAAAAAAGTGGATTGCATTAGTCAAGAGGTCGTAACTTGATAATCTCATCCTTCTGAATCATCACTAATCAAAAGATTAGATAATTTCACTCTATGTTTTCATCCATTTTGGTTGAGCACACCCAACTTCATCCCTACATCAGCTCTAACATATCTTAG

Coding sequence (CDS)

ATGCTTTCCAGAGTTGGGAACGTTCTTTGGATGGAAAATCGGGACGATGAAGACTCATCTTCCTGGACTAAAAACAACACCGACCACAATCATCTCAACCACCCTGTTAATTGCTCTGTTTTGAACAACAAAGACGAAATCACCTCCCTCTCTACCTTCAAATCCATGCTTGAGGTTGAAGATGACTGGTGTATCTCTGCTAATGCTCTCCATAACCATAACCACCACACCGACATCAATGACATTACCTTCTCTCAAAATTTCACCGACCCACCTGATAATTTGTTGCTCCCCCCTGGAGATTCCTCCTCTTCTTGTTCCCCTTCTTCTTCTGTGTTTAATAACATTGACCCATCTCAATTGCGTTTCTTCTTACCTCCAACTCGCACTTTGTCTTCACTTCATAAGGTAGTTTCTAACAACCCTTTAGACCATGGCTTCGATTTGGGAGCAGAGGTTGGGTTTCTTGACGTCCAAGCTTCAAATGCTTCGACTCTGCTCAACGATGGAGGTGGGTTATTAACTGGGTTCACTGATTTAAGCCCAACTAGTCAGATGAACACTCCTAGTTTGTGCTTAGGTTCTCAATTGACAGCACAAAACGTGGCCCCAATGAGTGATAATTGTTCGGGATTAGCTGGATTTCAGAGTTTTGATGAGAATTTGGGAAATGCTCTGCTTTTGAATCGGTCTAAGCTTTTGAGACCACTTGAATCTTTTCCCTCAGTGGGAGCTCAGCCGACTCTTTTCCAGAAGAGGGCTGCTCTAAGGAAGAGTTTAGCTGATAAGGGAAGCAGTTTGGGGGTTTTGAGCCCCGATGGCGGCTGGTTTTCAAATAGGATTGAAGGGGGGATTGGGAAAAATGAAATGGGTGAAGAAAATGGGAAGAAGAGGAAAATGGTTTATGCAGATGAATTGCAAGATACTAGCATCGATACATCCCGTTTCAATTACGATTCTGATGACTTTACCGAGAATACTAACACTAAATTGGATGAGAGTGGTAGAAATGTTGGAAATACATCTAACGCCAATAGTACAGTAACCGGCGGCGACCAGAAGGGGAAGAAAAAAGGACTTCCAGCGAAGAATTTAATGGCCGAGAGACGCCGGAGGAAGAAGCTCAATGATAGGCTGTACATGCTGAGGTCCGTTGTTCCAAAAATCAGCAAAATGGATAGAGCTTCAATTCTTGGAGATGCAATTGAGTACTTGAAGGAATTACTGCAAAGAATCAACGACCTCCATAATGAATTGGAGTTTTCTCCTTCTGGGGCAGCCTTGACGCCAGGTGCAAGCTTCCATCCCTTGACTCCAACACCACCAAGCCTCTCGAGTCGTATAAAGGAGGAGCTTTGTCCTACCTCATTTCCCAGCCCAAACGGCCAACCTGCAAGGGTAAATATATTCCTGATCTTGGAGCAACTTTGCTTTGCCCTTCAAATGATCCAAGATTCTAGCATTTTGCAATTGTATTATATGCTATGA

Protein sequence

MLSRVGNVLWMENRDDEDSSSWTKNNTDHNHLNHPVNCSVLNNKDEITSLSTFKSMLEVEDDWCISANALHNHNHHTDINDITFSQNFTDPPDNLLLPPGDSSSSCSPSSSVFNNIDPSQLRFFLPPTRTLSSLHKVVSNNPLDHGFDLGAEVGFLDVQASNASTLLNDGGGLLTGFTDLSPTSQMNTPSLCLGSQLTAQNVAPMSDNCSGLAGFQSFDENLGNALLLNRSKLLRPLESFPSVGAQPTLFQKRAALRKSLADKGSSLGVLSPDGGWFSNRIEGGIGKNEMGEENGKKRKMVYADELQDTSIDTSRFNYDSDDFTENTNTKLDESGRNVGNTSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEELCPTSFPSPNGQPARVNIFLILEQLCFALQMIQDSSILQLYYML

Homology

[Close]

BLAST of Cucsat.G14816 vs. ExPASy Swiss-Prot
Match: Q9LSE2 (Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.3e-67
Identity = 119/155 (76.77%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAI+YLKELLQRINDLHNELE +P G+     +SFHPLTPTP +LS R+KEE
Sbjct: 336 MDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEE 395

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+S PSP GQ ARVEVR+REGRAVNIHMFCGRRPGLLL+T++ALDNLGLD+QQAVISC
Sbjct: 396 LCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISC 455

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGF 156
           FNGFA+D+FRAEQC EGQ++ P+QIKA+L D+ G+
Sbjct: 456 FNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGY 490

[Close]

BLAST of Cucsat.G14816 vs. ExPASy Swiss-Prot
Match: Q9LPW3 (Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.5e-62
Identity = 118/156 (75.64%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAI+YLKELLQRINDLH ELE +P  +     +S HPLTPTP +LS R+KEE
Sbjct: 296 MDRASILGDAIDYLKELLQRINDLHTELESTPPSS-----SSLHPLTPTPQTLSYRVKEE 355

Query: 61  LCP-TSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVIS 120
           LCP +S PSP GQ  RVEVR+REG+AVNIHMFCGRRPGLLLST+RALDNLGLD+QQAVIS
Sbjct: 356 LCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVIS 415

Query: 121 CFNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGF 156
           CFNGFA+D+FRAEQC E  DV PEQIKA+LLD+ G+
Sbjct: 416 CFNGFALDVFRAEQCQEDHDVLPEQIKAVLLDTAGY 446

[Close]

BLAST of Cucsat.G14816 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.5e-16
Identity = 61/158 (38.61%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLT--PTPPSLSSRIK 60
           MDR SILGD I Y+KEL+ RI +L  E     S ++ T   S   L     PPS SS  +
Sbjct: 225 MDRTSILGDTIGYVKELMDRIKNLQVEAATGDSSSSSTENLSMLKLNTLKPPPSSSSGEE 284

Query: 61  EELCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVI 120
             L   S         R EV  RE  +  I M C   P LL ST+ AL+ LG++I+Q VI
Sbjct: 285 TPLIRNS--------TRFEVERRENGSTRIEMACAAIPELLPSTLAALEALGVEIEQCVI 344

Query: 121 SCFNGFAMDIFRAEQCSEGQDVH-PEQIKAILLDSVGF 156
           SCF+ FAM     +   + +     E+IK  L  S G+
Sbjct: 345 SCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRSAGY 374

[Close]

BLAST of Cucsat.G14816 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.5e-16
Identity = 56/155 (36.13%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDR SILGD I+Y+KEL +RI  L  E+  +P    L        L     S S    E 
Sbjct: 211 MDRTSILGDTIDYVKELTERIKTLEEEIGVTPEELDL--------LNTMKDSSSGNNNEM 270

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           L   S         + +V  R      I + C   PG+LLSTV AL+ LGL+I+Q V+SC
Sbjct: 271 LVRNS--------TKFDVENRGSGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSC 330

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGF 156
           F+ F M     ++  + Q V  ++IK  L  S G+
Sbjct: 331 FSDFGMQASCLQEDGKRQVVSTDEIKQTLFRSAGY 349

[Close]

BLAST of Cucsat.G14816 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDR SILGDAI+Y+KELL +IN L +E +                L  +  S  S++  +
Sbjct: 207 MDRTSILGDAIDYMKELLDKINKLQDEEQ---------------ELGNSNNSHHSKLFGD 266

Query: 61  LCPTSFPSP---NGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAV 120
           L   +   P   N     ++ R  + R   + + C  +PGLLLSTV  L+ LGL+I+Q V
Sbjct: 267 LKDLNANEPLVRNSPKFEIDRRDEDTR---VDICCSPKPGLLLSTVNTLETLGLEIEQCV 326

Query: 121 ISCFNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSA 159
           ISCF+ F++    +E   +   +  E IK  L  + G+  +
Sbjct: 327 ISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGGS 349

[Close]

BLAST of Cucsat.G14816 vs. NCBI nr
Match: XP_004154005.1 (transcription factor ICE1 [Cucumis sativus] >KGN64439.1 hypothetical protein Csa_014295 [Cucumis sativus])

HSP 1 Score: 319 bits (818), Expect = 1.78e-104
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

[Close]

BLAST of Cucsat.G14816 vs. NCBI nr
Match: XP_016899885.1 (PREDICTED: transcription factor ICE1-like isoform X2 [Cucumis melo])

HSP 1 Score: 318 bits (814), Expect = 3.24e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 364 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 423

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 424 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 483

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 484 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 522

[Close]

BLAST of Cucsat.G14816 vs. NCBI nr
Match: KAA0055355.1 (transcription factor ICE1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (814), Expect = 7.14e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

[Close]

BLAST of Cucsat.G14816 vs. NCBI nr
Match: XP_008440093.1 (PREDICTED: transcription factor ICE1-like isoform X1 [Cucumis melo] >TYJ99281.1 transcription factor ICE1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (814), Expect = 7.14e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

[Close]

BLAST of Cucsat.G14816 vs. NCBI nr
Match: XP_038894696.1 (transcription factor ICE1-like [Benincasa hispida])

HSP 1 Score: 312 bits (800), Expect = 7.54e-102
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEF+PSGAA TPGASFHPLTPTPPSLSSRIKEE
Sbjct: 385 MDRASILGDAIEYLKELLQRINDLHNELEFAPSGAAFTPGASFHPLTPTPPSLSSRIKEE 444

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 445 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 504

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKA+LLDSVGFN AT
Sbjct: 505 FNGFAMDIFRAEQCSEGQDVHPEQIKAMLLDSVGFNGAT 543

[Close]

BLAST of Cucsat.G14816 vs. ExPASy TrEMBL
Match: A0A0A0LTY1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051760 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 8.64e-105
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

[Close]

BLAST of Cucsat.G14816 vs. ExPASy TrEMBL
Match: A0A1S4DVZ7 (transcription factor ICE1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484672 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.57e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 364 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 423

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 424 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 483

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 484 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 522

[Close]

BLAST of Cucsat.G14816 vs. ExPASy TrEMBL
Match: A0A5D3BKM8 (Transcription factor ICE1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004940 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 3.46e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

[Close]

BLAST of Cucsat.G14816 vs. ExPASy TrEMBL
Match: A0A5A7UNZ7 (Transcription factor ICE1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002000 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 3.46e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

[Close]

BLAST of Cucsat.G14816 vs. ExPASy TrEMBL
Match: A0A1S3B0C1 (transcription factor ICE1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484672 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 3.46e-104
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 60
           MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE
Sbjct: 392 MDRASILGDAIEYLKELLQRINDLHNELEFSPSGAALTPGASFHPLTPTPPSLSSRIKEE 451

Query: 61  LCPTSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 120
           LCP+SFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC
Sbjct: 452 LCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISC 511

Query: 121 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 159
           FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT
Sbjct: 512 FNGFAMDIFRAEQCSEGQDVHPEQIKAILLDSVGFNSAT 550

The following BLAST results are available for this feature:

BLAST of Cucsat.G14816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSE2	3.3e-67	76.77	Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1	[more]
Q9LPW3	2.5e-62	75.64	Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1	[more]
Q336V8	3.5e-16	38.61	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q10S44	4.5e-16	36.13	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q9LSL1	1.1e-14	33.54	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]

BLAST of Cucsat.G14816 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154005.1	1.78e-104	100.00	transcription factor ICE1 [Cucumis sativus] >KGN64439.1 hypothetical protein Csa...	[more]
XP_016899885.1	3.24e-104	99.37	PREDICTED: transcription factor ICE1-like isoform X2 [Cucumis melo]	[more]
KAA0055355.1	7.14e-104	99.37	transcription factor ICE1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008440093.1	7.14e-104	99.37	PREDICTED: transcription factor ICE1-like isoform X1 [Cucumis melo] >TYJ99281.1 ...	[more]
XP_038894696.1	7.54e-102	96.86	transcription factor ICE1-like [Benincasa hispida]	[more]

BLAST of Cucsat.G14816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTY1	8.64e-105	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051760 PE=4 S...	[more]
A0A1S4DVZ7	1.57e-104	99.37	transcription factor ICE1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348467...	[more]
A0A5D3BKM8	3.46e-104	99.37	Transcription factor ICE1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7UNZ7	3.46e-104	99.37	Transcription factor ICE1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3B0C1	3.46e-104	99.37	transcription factor ICE1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348467...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 398..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..359
None	No IPR available	PANTHER	PTHR31945:SF98	BHLH TRANSCRIPTIONAL FACTOR	coord: 101..525
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 101..525
None	No IPR available	CDD	cd11443	bHLH_AtAMS_like	coord: 362..426 e-value: 4.55108E-39 score: 134.813
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 479..527 e-value: 1.57169E-7 score: 46.7725
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 365..414 e-value: 6.2E-14 score: 62.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 366..408 e-value: 1.9E-9 score: 37.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 359..408 score: 15.579952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 353..422 e-value: 1.9E-15 score: 58.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 362..424

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G14816.T2	Cucsat.G14816.T2	mRNA
Cucsat.G14816.T1	Cucsat.G14816.T1	mRNA
Cucsat.G14816.T8	Cucsat.G14816.T8	mRNA
Cucsat.G14816.T3	Cucsat.G14816.T3	mRNA
Cucsat.G14816.T4	Cucsat.G14816.T4	mRNA
Cucsat.G14816.T7	Cucsat.G14816.T7	mRNA
Cucsat.G14816.T5	Cucsat.G14816.T5	mRNA
Cucsat.G14816.T6	Cucsat.G14816.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding