Cucsat.G14773 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACTTTTATAGCATTTAATTGCTCTGAAATTTTCTTTCTCTAGAAGAAACCCAAGCAATTTCTTGGTTGATAAGCCAAACAAAGCCCTATTAATTCAAAGCACAAAAATCTGATCGGACTTCAAGGAAGAGTTTTTGAGAGCAATGATTCCGGCTTATAGATAGACTTTTTCCTATTTTTTTCTTTTGATATTTCTTGCAAAGATCCAACTGCCTCTAGTCAGGTTTTAATAGCAAAAACAAAAATCTTTCCATTTTGTTTATTTATTTATTTATTATTATAATCTCTACCCATTTCAATCGCATAGTCGGTTTTTCAGTATTATTTATATATATATATATATCTTTGGTTCTTTCTCTCAGTTTGTATCTTTTGGGCTGCCCCTTTTGGTCGCTCAATTCTGTTGGGATTTTTCTTCTGATGCCATGGAGTCTACTATGGTGATTAAGGTTCGAATTTTCCTCTTTGTTCTATGGGTTTTTTGTCTTGTTGGTTTTCCTTAACGATGATGATGAGGATGATTGTGGCTGTGTTTGTCCTTGTGTTTGTTTATGTGATTGTCTTGTTTTGAGTGTATGCAATTTGTTTTTATTATTATGGGCGGAGGATTGTTAACTTTGTTCGTGATCTCGATCAATTTGAAATTTTTGCTTGCTGGGTGTGAGAGAATTCATAATCAATTCGTTTTAGCGAACCTCTATTTTCCATTTCGTTGGATTATGTTGTTGGTGTCTAACGTTTATATTGTTCTTTGTTTGATTAGAAAATAAGGCAAAAGTTAGATTGAGAATTGGGAAATTGGGGAAGGTTGACTTGAGTTGCTCAATTGTGGGGTATTATGGATTGATGATGCTACGTTCTTAATGATTAATTCCATGTTATTTCAGATTTCGTATCAGTAGGGTTATAGTTCTGACTCTGGAAGTGGGAAATTCGTTGGTGTTTACTGTATTATACCTTAAATCATAACTTTTTAAGGTTTCAATTTTCCAAACCAGTGGGGTTATAGTTGGAAGGCTTTGATTTTCGTCTGTGATATCCATATTTAATGGATGTCTGTTTTTGCATTGTTACGGACGTCTGCTTTCTTCATATATTGTGGTCTTGTTAGAAACAAAATGAACCCGACGTTCATTTTGTTTGCAAGTGCAGCTCGTGTTTGTTTTTTTCCTTTGATTTTTCCATTATCTATTTTTTAAAAAATGCTTAGGTCTGTCTTCACTTAATGAGGTGAATTTCACTTTTTTTGTCTCAAGGTTTATAGCTTCTTTCATTCATAAAGAGACATGGGTTGTTTGATTAACGAGCTGCCTAGTTCTTGAAGAGAGGCCGTGCTTTGAGCATGGATTTTTTATGAATTGGGATGTTATTGCTTTTAGACACCAAGGCTTTTAAAAACATCAGAAGAAAAATCTTATACCAACTTTGTAATTAGTGTGCTCCCCTGAAAATTTTTACAGGTTAGGTATGGAGATATGCTGAGACGCTTCAGTGTAAAAGTAGATGAAAACAATAGATTGGATCTTGACATCAACGGTTTGAGATCAAAAGTAGTTGATCTCTTCAGCTTCTCTTCTGATACTGATTTTATATTGACTTACGTTGATGACGATGGTGATGTTGTCACCCTCGTTAATGGTGATGATCTGGATGAAATGATGAGCCAACACTTGAGTTTCTTGAAAATTAATGTGCATTTGAGAAATAAGGAAAAAGGCCAATCTCATAATAAATCAGATGGAAGTTCTACCCGAATGACACCCGAAAGTTCATTTCAAAATGTTTTTCCTGGTATCTCCGAGGTTTTGAAATCTATGCCAGAGCCCTTGCCAGAATTTTGTTCACAGCTCCTCCTTGACATTGCTTCAAAAGCTGTTGCTAGTCCCGTGCTTTCTGAGCTTGCTCAAAGCTTTATTCGGTTGGGAAACCAAAACTCACACTCAAGTTCTCGGACCTCATCTGTTCCAGAGGTGAGCACACAGAATGTGGCCACTGAGTGTCCAACACCACCCCTAGGCGCAGATTCAAGAGCTTCAAAGAATGATGACTTTCACCAAGAAACTGGGTCAAAATTTCAATGCAGTGGTTTTTCTACTAAAAATAGGAAGATAATTAACAGTGAGAATGTGACAAAGAACACTGGTGAGCCTATTGCTTCTGGACTTTCCATTGGGAAACCAGCTATTGCTGCTCGTTCCAGCAGCTCTTTTGATGGAAAGGAAAAGGAAAAACGCAGTGATGCATTTCTTAAGCTTGGTAACTCACATTGTTCACCTGCAACTTCTGTTGATCGTAGGTTTATTAATGAGTGCCCTTTCAGTGGAATACCTTGGGCTCCTCAACCATATTCGAGAACTGCAGGTATAGAGCCAGTAAGTAGCAGCAGTGGTAACACTGAATCTGCAGGAAGTATGTTCCATAAAGGTCCAATAGTTAACAGCAGTGACTATGTTGGATCTGTGGGAAATATGTTCCATAAAGGTGTTATTTGTGATGGCTGTGGAGCCCGTCCAATTACTGGTCCGCGTTTCAAGTCCCGAGTGTAAGAATGAAAGATGAACCAATCTAAATCAATTAATTTACCTTTCATTTTCCATTGGTATCTGTTTCTAAATACCCCACTTTTTTTTGTCTTCTGGTATTCTTCAGGAAAGATAATTATGATCTCTGTAGCATCTGCTTTGCTAAAATGGGTAACGAGGCTGACTACATTAGGATCGATCGACCTGTCTCTTGCCGCTATCCAAGAATGAAAGCATTCAACCATAGAGTATGCAATTTTGATGATACAGCTTCTAATGCATCCTTTGTTTGTCATAACAATTTGATTTTGGTTTCAACGTCCTTTCTCTCATTGCAGTTTCCATTGTCTGGCCCTCGAATAATCGATCCTTTGAGAAGTTCTGTAAAGCAGACCAAGCTTGATAGTCACTTTGTAGCTGATGTTAATGTATTTGATGGCACTGTGATGACTCCACGTACCCCATTTACCAAGATATGGCGACTGCTTAATAGTGGGACTTCGAATTGGCCCCATGGTTCACAGCTAGTGTGGACTGGAGGACACAAGTTCAGCCATTCATTATCTGTTGAAATCGAGGTAGAAAAATATTATGTAGTTTGATCTTAGTATTTTTCTAAAAGAAATACTTCTAAGACTTTTCTCAAATCATCTCTAGGTTCCTGAGGACGGACTTCCTCCGGGTCAGGAAATTGAAATTGCAGTTGACTTTACTACCCCTCCATTTTGTGGTCAATACACCTCGTACTGGAGTATGGCATCTCCATCTGGCCACAAATTTGGGCAACGTGTTTGGGTTCTTATTCAGGTATTTATTTAATATATGGTCATCTCAGTTTTTCTAGTGCTGTATATAGATTATGCCATAAGTTCATATGATTACACTACCTCATGAACCCAACTTTTTTTGTTTACAAACATGAAGGTTGATGAAGTACTTGGGATACCAGATTCCAATTATTCCCAAGCTTTGGACTTAAATTTACCCCCCATACCCATAAATCCTTCCCAAGAGGGTGTAGAAAAGAATTCAAAGACTCCTGCAGTTTCTGATGGTGTACTTTTCCCCCGTGATTCCATCCCCATCTTCGAACAAGTAAAACCTGATCATAGTCTGTCTCACCCGGATCTACAATTCCTCGTAGATGAGGGTATTCTAGTTGTTGAAGGCCCTGCTGCTACTTCTTCTAAGGATGATAATTTGGGTTCGTCCTGCTCTGCTGTCGACTGTCATGGAGTTCTACCAAGTTCAACCAATGTTCCCTCTAAGTCATGCCCTTTTATTGATTTTCCTGCACCAACTCCTCCTGCAAACCCATTTCCAACACCATCCCCCAAGCTTTCTCCCGCATCATCCGAACATGTCATTGCCAATAATGCCAATAATGGCAATAACGGCAATAACGGCAATAACTTGGTTGAAGAAACTCTTCTTAAAACACTCGAGGATATGGGATTCAAACAGGTTGATCTAAACAAGGAAGTACTAAAGAGGAACGAGTATGATCTAGGAAAGTCAGTGGATGAACTCTGCGGAGTTGCTGAATGGGATCCGATCCTTGATGAGTTGGAGGAAATGGTTAGTAATCTGTTTAGCAAAGTTGCTAATCCTTGATTTCTCAAGTGTTGGTTTATGATTATAATAAAATATATTTGTGTTATAGGGATTCAACGACAAGGAAATGAACAAAAGACTTCTGATGAAGAACAATGGCAGCATGAAGCAAGTAGTGATGGAACTTCTTTATGGGGAGAAGGCTTAGTTGAAGAAAGGGCCCTCAAAAGTCAAAACTATGGATTAGAATGTGAATATATATTGCAAACTAAATAAATCTATGGATATGACACTGTTGTGTTGGCTCTGTTAACTAGGGATGAGTTTCATGTTTTGTTGGAGTGGTCTTTTGAGTCATTTCTAGTTTCTGTTTAATCTGTCTTTTCTCTTTGCAAAGGTACATACATTCCTCTTCTAACTTTTGTTCTATTCAGTTAATATATATTGAAAACCTTTCTGTTTAACTATAAACTCCCTTTTTTTTAAAGCACTTTCTAGC ATGGAGTCTACTATGGTGATTAAGGTTAGGTATGGAGATATGCTGAGACGCTTCAGTGTAAAAGTAGATGAAAACAATAGATTGGATCTTGACATCAACGGTTTGAGATCAAAAGTAGTTGATCTCTTCAGCTTCTCTTCTGATACTGATTTTATATTGACTTACGTTGATGACGATGGTGATGTTGTCACCCTCGTTAATGGTGATGATCTGGATGAAATGATGAGCCAACACTTGAGTTTCTTGAAAATTAATGTGCATTTGAGAAATAAGGAAAAAGGCCAATCTCATAATAAATCAGATGGAAGTTCTACCCGAATGACACCCGAAAGTTCATTTCAAAATGTTTTTCCTGGTATCTCCGAGGTTTTGAAATCTATGCCAGAGCCCTTGCCAGAATTTTGTTCACAGCTCCTCCTTGACATTGCTTCAAAAGCTGTTGCTAGTCCCGTGCTTTCTGAGCTTGCTCAAAGCTTTATTCGGTTGGGAAACCAAAACTCACACTCAAGTTCTCGGACCTCATCTGTTCCAGAGGTGAGCACACAGAATGTGGCCACTGAGTGTCCAACACCACCCCTAGGCGCAGATTCAAGAGCTTCAAAGAATGATGACTTTCACCAAGAAACTGGGTCAAAATTTCAATGCAGTGGTTTTTCTACTAAAAATAGGAAGATAATTAACAGTGAGAATGTGACAAAGAACACTGGTGAGCCTATTGCTTCTGGACTTTCCATTGGGAAACCAGCTATTGCTGCTCGTTCCAGCAGCTCTTTTGATGGAAAGGAAAAGGAAAAACGCAGTGATGCATTTCTTAAGCTTGGTAACTCACATTGTTCACCTGCAACTTCTGTTGATCGTAGGTTTATTAATGAGTGCCCTTTCAGTGGAATACCTTGGGCTCCTCAACCATATTCGAGAACTGCAGGTATAGAGCCAGTAAGTAGCAGCAGTGGTAACACTGAATCTGCAGGAAGTATGTTCCATAAAGGTCCAATAGTTAACAGCAGTGACTATGTTGGATCTGTGGGAAATATGTTCCATAAAGGTGTTATTTGTGATGGCTGTGGAGCCCGTCCAATTACTGGTCCGCGTTTCAAGTCCCGAGTGAAAGATAATTATGATCTCTGTAGCATCTGCTTTGCTAAAATGGGTAACGAGGCTGACTACATTAGGATCGATCGACCTGTCTCTTGCCGCTATCCAAGAATGAAAGCATTCAACCATAGATTTCCATTGTCTGGCCCTCGAATAATCGATCCTTTGAGAAGTTCTGTAAAGCAGACCAAGCTTGATAGTCACTTTGTAGCTGATGTTAATGTATTTGATGGCACTGTGATGACTCCACGTACCCCATTTACCAAGATATGGCGACTGCTTAATAGTGGGACTTCGAATTGGCCCCATGGTTCACAGCTAGTGTGGACTGGAGGACACAAGTTCAGCCATTCATTATCTGTTGAAATCGAGGTTCCTGAGGACGGACTTCCTCCGGGTCAGGAAATTGAAATTGCAGTTGACTTTACTACCCCTCCATTTTGTGGTCAATACACCTCGTACTGGAGTATGGCATCTCCATCTGGCCACAAATTTGGGCAACGTGTTTGGGTTCTTATTCAGGTTGATGAAGTACTTGGGATACCAGATTCCAATTATTCCCAAGCTTTGGACTTAAATTTACCCCCCATACCCATAAATCCTTCCCAAGAGGGTGTAGAAAAGAATTCAAAGACTCCTGCAGTTTCTGATGGTGTACTTTTCCCCCGTGATTCCATCCCCATCTTCGAACAAGTAAAACCTGATCATAGTCTGTCTCACCCGGATCTACAATTCCTCGTAGATGAGGGTATTCTAGTTGTTGAAGGCCCTGCTGCTACTTCTTCTAAGGATGATAATTTGGGTTCGTCCTGCTCTGCTGTCGACTGTCATGGAGTTCTACCAAGTTCAACCAATGTTCCCTCTAAGTCATGCCCTTTTATTGATTTTCCTGCACCAACTCCTCCTGCAAACCCATTTCCAACACCATCCCCCAAGCTTTCTCCCGCATCATCCGAACATGTCATTGCCAATAATGCCAATAATGGCAATAACGGCAATAACGGCAATAACTTGGTTGAAGAAACTCTTCTTAAAACACTCGAGGATATGGGATTCAAACAGGTTGATCTAAACAAGGAAGTACTAAAGAGGAACGAGTATGATCTAGGAAAGTCAGTGGATGAACTCTGCGGAGTTGCTGAATGGGATCCGATCCTTGATGAGTTGGAGGAAATGGGATTCAACGACAAGGAAATGAACAAAAGACTTCTGATGAAGAACAATGGCAGCATGAAGCAAGTAGTGATGGAACTTCTTTATGGGGAGAAGGCTTAG MESTMVIKVRYGDMLRRFSVKVDENNRLDLDINGLRSKVVDLFSFSSDTDFILTYVDDDGDVVTLVNGDDLDEMMSQHLSFLKINVHLRNKEKGQSHNKSDGSSTRMTPESSFQNVFPGISEVLKSMPEPLPEFCSQLLLDIASKAVASPVLSELAQSFIRLGNQNSHSSSRTSSVPEVSTQNVATECPTPPLGADSRASKNDDFHQETGSKFQCSGFSTKNRKIINSENVTKNTGEPIASGLSIGKPAIAARSSSSFDGKEKEKRSDAFLKLGNSHCSPATSVDRRFINECPFSGIPWAPQPYSRTAGIEPVSSSSGNTESAGSMFHKGPIVNSSDYVGSVGNMFHKGVICDGCGARPITGPRFKSRVKDNYDLCSICFAKMGNEADYIRIDRPVSCRYPRMKAFNHRFPLSGPRIIDPLRSSVKQTKLDSHFVADVNVFDGTVMTPRTPFTKIWRLLNSGTSNWPHGSQLVWTGGHKFSHSLSVEIEVPEDGLPPGQEIEIAVDFTTPPFCGQYTSYWSMASPSGHKFGQRVWVLIQVDEVLGIPDSNYSQALDLNLPPIPINPSQEGVEKNSKTPAVSDGVLFPRDSIPIFEQVKPDHSLSHPDLQFLVDEGILVVEGPAATSSKDDNLGSSCSAVDCHGVLPSSTNVPSKSCPFIDFPAPTPPANPFPTPSPKLSPASSEHVIANNANNGNNGNNGNNLVEETLLKTLEDMGFKQVDLNKEVLKRNEYDLGKSVDELCGVAEWDPILDELEEMGFNDKEMNKRLLMKNNGSMKQVVMELLYGEKA Homology
BLAST of Cucsat.G14773 vs. ExPASy Swiss-Prot
Match: M1BJF6 (Protein JOKA2 OS=Solanum tuberosum OX=4113 GN=JOKA2 PE=1 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 8.8e-78 Identity = 187/450 (41.56%), Postives = 248/450 (55.11%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy Swiss-Prot
Match: Q9SB64 (Protein NBR1 homolog OS=Arabidopsis thaliana OX=3702 GN=NBR1 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.0e-70 Identity = 179/444 (40.32%), Postives = 241/444 (54.28%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy Swiss-Prot
Match: Q5BL31 (Protein ILRUN OS=Danio rerio OX=7955 GN=ilrun PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-16 Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy Swiss-Prot
Match: Q5F3N9 (Protein ILRUN OS=Gallus gallus OX=9031 GN=ILRUN PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.6e-15 Identity = 53/183 (28.96%), Postives = 85/183 (46.45%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy Swiss-Prot
Match: Q14596 (Next to BRCA1 gene 1 protein OS=Homo sapiens OX=9606 GN=NBR1 PE=1 SV=3) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-09 Identity = 47/164 (28.66%), Postives = 72/164 (43.90%), Query Frame = 0
BLAST of Cucsat.G14773 vs. NCBI nr
Match: XP_031744997.1 (protein NBR1 homolog isoform X1 [Cucumis sativus]) HSP 1 Score: 890 bits (2300), Expect = 0.0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
BLAST of Cucsat.G14773 vs. NCBI nr
Match: XP_004152569.1 (protein NBR1 homolog isoform X2 [Cucumis sativus] >KGN64343.1 hypothetical protein Csa_013325 [Cucumis sativus]) HSP 1 Score: 815 bits (2104), Expect = 4.44e-291 Identity = 407/437 (93.14%), Postives = 407/437 (93.14%), Query Frame = 0
BLAST of Cucsat.G14773 vs. NCBI nr
Match: KAA0055260.1 (protein NBR1-like protein [Cucumis melo var. makuwa] >TYJ99184.1 protein NBR1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 721 bits (1861), Expect = 6.54e-256 Identity = 370/439 (84.28%), Postives = 383/439 (87.24%), Query Frame = 0
BLAST of Cucsat.G14773 vs. NCBI nr
Match: XP_008438837.1 (PREDICTED: protein NBR1 homolog [Cucumis melo]) HSP 1 Score: 721 bits (1861), Expect = 2.53e-254 Identity = 370/439 (84.28%), Postives = 383/439 (87.24%), Query Frame = 0
BLAST of Cucsat.G14773 vs. NCBI nr
Match: XP_038894265.1 (protein NBR1 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 640 bits (1650), Expect = 2.38e-221 Identity = 337/441 (76.42%), Postives = 365/441 (82.77%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy TrEMBL
Match: A0A0A0LRB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046870 PE=4 SV=1) HSP 1 Score: 815 bits (2104), Expect = 2.15e-291 Identity = 407/437 (93.14%), Postives = 407/437 (93.14%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy TrEMBL
Match: A0A5A7UJA0 (Protein NBR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003940 PE=4 SV=1) HSP 1 Score: 721 bits (1861), Expect = 3.17e-256 Identity = 370/439 (84.28%), Postives = 383/439 (87.24%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy TrEMBL
Match: A0A1S3AY04 (protein NBR1 homolog OS=Cucumis melo OX=3656 GN=LOC103483818 PE=4 SV=1) HSP 1 Score: 721 bits (1861), Expect = 1.22e-254 Identity = 370/439 (84.28%), Postives = 383/439 (87.24%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy TrEMBL
Match: A0A6J1EAF6 (protein NBR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431348 PE=4 SV=1) HSP 1 Score: 509 bits (1312), Expect = 3.57e-171 Identity = 291/446 (65.25%), Postives = 322/446 (72.20%), Query Frame = 0
BLAST of Cucsat.G14773 vs. ExPASy TrEMBL
Match: A0A6J1C7J8 (protein NBR1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008715 PE=4 SV=1) HSP 1 Score: 461 bits (1186), Expect = 9.23e-153 Identity = 254/441 (57.60%), Postives = 302/441 (68.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|