Cucsat.G1468 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1468
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein CURVATURE THYLAKOID 1B, chloroplastic
Location	ctg10: 137732 .. 139059 (-)
RNA-Seq Expression	Cucsat.G1468
Synteny	Cucsat.G1468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCTCTGGAATAAGGAGAAAACTATAGAGAGAGAGAGAGAGAGAGAAAAGAGAAGATATTTATCCATAAGCTAAGCATTGAGTGTGTTATTACAAAACCCTTTTATCCAATCAAACACTATCCATTTCAATCCTCTCTCATTTCCTCAACTCTCATAGCATTATCCAAATTGATTGTGAAATGAGTGGCTCTCTATCTTCATAACTTTAACACAATTTATATAACCCAACACACCAAAAACCATCTCCAAAAAAGGGAAATAAACCAAAACACATAAACACCTGTCTACAAAACAAAAGGAAAAAAACCCCAACACCAAAATCTTCACTTTCTTTCTTGCAGAAATTACCTTCTTCTTGTGTGTGAATATTTTGAGTGTGTGAGGCATTCATCAATGGCTTCTTCTTCTTCATCCACATTTGCTCTCTCTTCCTCCTCCACCCTCCTCGATTCTAAGGCCCCTCGACAATCCGCTTCCCCGTCATCCACCGTCCCGCTCCCCACTCTCCCCTCACCCCCTACTCCCTTGTCCCAGATCCGCCCTTGGAAGTCCACTGCCTATTGTGAGAATTCTATTATATATATATTAATATATCGTTTAAATTTAGCAGATCTTAAGTTAACTATATTGATTTTGTACGGATTATAGGTCGGAAGATTGCTCGCAATGTGATGGGGATGGCGACCGGAGAAGTCCCAGCTGAAGTGGCGGCCGGGGAGCTGGCGGAGATGCCTGAAATTGTCAAAAAAGTTCAAGAAGCTGTATGCCAAATTTGTTTTTTTGAAAGACGAAAAAGAAAAGTTAATTACATTATTATTAATGGGTTGGATTTTGTTTTGGTTCAGTGGGATAAGGTTGAAGATAAGTATGCTGTGAGCTCACTTGCTGTCTCCGGCTTTGTGGCCCTTTGGGCCTCCGCTGGCGTTGTCTCCGTAAGCATTTTGATTCTGTATGAGTTGTAAATAAGTATAGTTGATCAAGAGCATAAAATAAGGGTCTTATATTAAATTTTGCAAAATTTGTACATTAATCTATTTTTATATATATCTGCAGGCAATTGATAGGCTTCCTCTAGTTCCTGGCCTGCTTGAGCTTGTGGGAATTGGCTACACTGGGGTAAGTTTCTACATAATTTAATCCCAATTATATACTTCTAAATTTATAGCATACAATTTAGTTTAATGGCCATATTTGCATTTTGTGTATAATTATATGTGCAGTGGTTTGCATACAAGAATCTGATTTTCAGACCAGACAGGTAATAAGTTCTAATAACACACCTTTTTTTTTTTTTTTTAATTAAACACCATGATTATATTATATTGAAGATGTTTATTTATTTATTATATTGTTGTTTGATTTTAAAAAAAAATACATTTTGATAAATTTTTATAGGGAAGCATTATTGCAGAAACTAAAGGAAACTTACAGTGAGATAATAGGGAGCAGCTAAAGAAGAGTATTGATGTTGTTGTGTGTGTTCAGAGAGGGGATTTAATTATTGAATAATAAAAAAAATATAATTAATTAATTGCTGTTTTTGCATTGCATTATTGCAACTATATTTGCATGAAAAAATTGTAACTCTTCTTTTTACCCACCCTTTTTTGTTCTCTTCATATATTATCTCTTATGTAATTGCCCTAACTGATCAATATCCCAATCTTTATGTGCTTTCCTTTTACTACCTAGCTACCTCTTATATTGCTCTCCAATTATTCCAATTTTACACAAACACTTTTTCAAGCCACCTAGGGACTACACCCTTTTAGTGTGTATTGTATAAGATTGATTGTTCGGTGATGTTTTCCTTTTGAACTTTGTTTTCTCAAGGAAACAATGTAATTGTTATTTTTCTTAAACATAATTTAAATAAGTTAGTAGAGAGATCACTTAAATGATACAATTACAAACGTCTAAACCTATATAAAAAATTTTA

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCATCCACATTTGCTCTCTCTTCCTCCTCCACCCTCCTCGATTCTAAGGCCCCTCGACAATCCGCTTCCCCGTCATCCACCGTCCCGCTCCCCACTCTCCCCTCACCCCCTACTCCCTTGTCCCAGATCCGCCCTTGGAAGTCCACTGCCTATTGTCGGAAGATTGCTCGCAATGTGATGGGGATGGCGACCGGAGAAGTCCCAGCTGAAGTGGCGGCCGGGGAGCTGGCGGAGATGCCTGAAATTGTCAAAAAAGTTCAAGAAGCTTGGGATAAGGTTGAAGATAAGTATGCTGTGAGCTCACTTGCTGTCTCCGGCTTTGTGGCCCTTTGGGCCTCCGCTGGCGTTGTCTCCGCAATTGATAGGCTTCCTCTAGTTCCTGGCCTGCTTGAGCTTGTGGGAATTGGCTACACTGGGTGGTTTGCATACAAGAATCTGATTTTCAGACCAGACAGGGAAGCATTATTGCAGAAACTAAAGGAAACTTACAGTGAGATAATAGGGAGCAGCTAA

Protein sequence

MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDREALLQKLKETYSEIIGSS

Homology

[Close]

BLAST of Cucsat.G1468 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 9.6e-43
Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 7   STFALSSSSTLLDSKAP-----RQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIA 66
           ++ ++SSSST++DS+AP       SAS  S + LPTLP      S  R  K+TAYCRKI 
Sbjct: 2   ASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQ----SHTRAAKATAYCRKIV 61

Query: 67  RNVMGMAT---GEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWAS 126
           RNV+  AT   GE PA     E  E+PEIVK  QEAW+KV+DKYA+ SLA +G VALW S
Sbjct: 62  RNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGS 121

Query: 127 AGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158
           AG++SAIDRLPLVPG+LELVGIGYTGWF YKNL+F+PDR
Sbjct: 122 AGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDR 156

[Close]

BLAST of Cucsat.G1468 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-14
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 77  AAGELAEMP---EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 136
           A+GE ++     ++V  +Q  WDK ED+  +  L  +G VALWAS  +++AID+LP++  
Sbjct: 56  ASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISS 115

Query: 137 LLELVGIGYTGWFAYKNLIFRPDR 158
             ELVGI ++ WF Y+ L+F+PDR
Sbjct: 116 GFELVGILFSTWFTYRYLLFKPDR 139

[Close]

BLAST of Cucsat.G1468 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11
Identity = 43/141 (30.50%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 26  SASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARNVMGMATGE-------VPAEVAA 85
           +AS S  V +P +P+  T  S +      ++ R      + + +G        +    ++
Sbjct: 6   AASSSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS 65

Query: 86  GELAEMP--EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPGLLE 145
            E + +   E++  ++E WD +E+K  V        VA+W S+ VV AI+ +PL+P ++E
Sbjct: 66  EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVME 125

Query: 146 LVGIGYTGWFAYKNLIFRPDR 158
           LVG+GYTGWF Y+ L+F+  R
Sbjct: 126 LVGLGYTGWFVYRYLLFKSSR 146

[Close]

BLAST of Cucsat.G1468 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 28/95 (29.47%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 70  GEVPAEVAAGELAEMPEIVKKVQEAWDKVED-------KYAVSSLAVSGFVALWASAGVV 129
           G V A       +E P+   +  +A + + D        Y++        VAL+ ++ +V
Sbjct: 79  GVVVAAEEKNSNSEAPQAEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIV 138

Query: 130 SAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158
           S+++ +PL P L+E+VG+GYT WF  + L+F+ +R
Sbjct: 139 SSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 173

[Close]

BLAST of Cucsat.G1468 vs. ExPASy Swiss-Prot
Match: Q8YX97 (Valine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=valS PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.7e-04
Identity = 18/51 (35.29%), Postives = 29/51 (56.86%), Query Frame = 0


Query: 107 LAVSGFVALWASAGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158
           L ++G V L  +  V   +D +P +    E+VG+GY+ WF  +NL+  P R
Sbjct: 850 LVIAGLVFLRVALAVADTVDNVPFLGTFFEIVGLGYSAWFVTRNLLSTPAR 900

[Close]

BLAST of Cucsat.G1468 vs. NCBI nr
Match: XP_004140528.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN46474.1 hypothetical protein Csa_005298 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 1.36e-100
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. NCBI nr
Match: XP_038906765.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Benincasa hispida])

HSP 1 Score: 287 bits (735), Expect = 4.37e-97
Identity = 150/157 (95.54%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPS+ VPLPTLPSPPTP SQIRPWKSTAYCRK+
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSANVPLPTLPSPPTPSSQIRPWKSTAYCRKV 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVM MATGEVPAEVAAGELAEMPEI+KKVQEAWDKVEDKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMAMATGEVPAEVAAGELAEMPEIIKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPL+PGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLIPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. NCBI nr
Match: XP_008459821.1 (PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis melo] >KAA0039802.1 protein CURVATURE THYLAKOID 1B [Cucumis melo var. makuwa] >TYK24695.1 protein CURVATURE THYLAKOID 1B [Cucumis melo var. makuwa])

HSP 1 Score: 284 bits (726), Expect = 1.07e-95
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MASSSSSTFALSSS-STLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MASSSSSTFALSSS STLLDSKAPRQS SPSSTVPLPTLPSPPTP +QIRPWKSTAYCRK
Sbjct: 1   MASSSSSTFALSSSASTLLDSKAPRQSGSPSSTVPLPTLPSPPTPSAQIRPWKSTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           IARNVM MATGEVPAEVAAGELAEMPEI+KKVQEAWDKVEDKYAVSSLAVSGFVALWASA
Sbjct: 61  IARNVMAMATGEVPAEVAAGELAEMPEIIKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158

[Close]

BLAST of Cucsat.G1468 vs. NCBI nr
Match: XP_022992417.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita maxima])

HSP 1 Score: 278 bits (712), Expect = 1.40e-93
Identity = 145/157 (92.36%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPP P +QIRPWKSTAYCR+I
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPAPSTQIRPWKSTAYCRRI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVM MATGEVPAEVA  E+AE+PEI+KKVQEAWDKV+DKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMAMATGEVPAEVATVEMAELPEIIKKVQEAWDKVDDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPL+PGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLIPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. NCBI nr
Match: XP_022929793.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita moschata] >XP_023547749.1 protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita pepo subsp. pepo] >KAG7013838.1 Protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277 bits (709), Expect = 4.02e-93
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPP P +QIR WKSTAYCRKI
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPPPSTQIRSWKSTAYCRKI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVM MATGEVPAEVA  E+AE+PEI+KKVQEAWDKV+DKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMAMATGEVPAEVATAEMAELPEIIKKVQEAWDKVDDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPL+PGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLIPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. ExPASy TrEMBL
Match: A0A0A0KCB7 (CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G095900 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 6.60e-101
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. ExPASy TrEMBL
Match: A0A5A7T8Q0 (Protein CURVATURE THYLAKOID 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002480 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 5.16e-96
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MASSSSSTFALSSS-STLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MASSSSSTFALSSS STLLDSKAPRQS SPSSTVPLPTLPSPPTP +QIRPWKSTAYCRK
Sbjct: 1   MASSSSSTFALSSSASTLLDSKAPRQSGSPSSTVPLPTLPSPPTPSAQIRPWKSTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           IARNVM MATGEVPAEVAAGELAEMPEI+KKVQEAWDKVEDKYAVSSLAVSGFVALWASA
Sbjct: 61  IARNVMAMATGEVPAEVAAGELAEMPEIIKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158

[Close]

BLAST of Cucsat.G1468 vs. ExPASy TrEMBL
Match: A0A1S3CCA4 (protein CURVATURE THYLAKOID 1B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498834 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 5.16e-96
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MASSSSSTFALSSS-STLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRK 60
           MASSSSSTFALSSS STLLDSKAPRQS SPSSTVPLPTLPSPPTP +QIRPWKSTAYCRK
Sbjct: 1   MASSSSSTFALSSSASTLLDSKAPRQSGSPSSTVPLPTLPSPPTPSAQIRPWKSTAYCRK 60

Query: 61  IARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120
           IARNVM MATGEVPAEVAAGELAEMPEI+KKVQEAWDKVEDKYAVSSLAVSGFVALWASA
Sbjct: 61  IARNVMAMATGEVPAEVAAGELAEMPEIIKKVQEAWDKVEDKYAVSSLAVSGFVALWASA 120

Query: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 GVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158

[Close]

BLAST of Cucsat.G1468 vs. ExPASy TrEMBL
Match: A0A6J1JPR9 (protein CURVATURE THYLAKOID 1B, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488730 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 6.78e-94
Identity = 145/157 (92.36%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPP P +QIRPWKSTAYCR+I
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPAPSTQIRPWKSTAYCRRI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVM MATGEVPAEVA  E+AE+PEI+KKVQEAWDKV+DKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMAMATGEVPAEVATVEMAELPEIIKKVQEAWDKVDDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPL+PGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLIPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. ExPASy TrEMBL
Match: A0A6J1ET79 (protein CURVATURE THYLAKOID 1B, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436295 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 1.94e-93
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKI 60
           MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPP P +QIR WKSTAYCRKI
Sbjct: 1   MASSSSSTFALSSSSTLLDSKAPRQSASPSSTVPLPTLPSPPPPSTQIRSWKSTAYCRKI 60

Query: 61  ARNVMGMATGEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAG 120
           ARNVM MATGEVPAEVA  E+AE+PEI+KKVQEAWDKV+DKYAVSSLAVSGFVALWASAG
Sbjct: 61  ARNVMAMATGEVPAEVATAEMAELPEIIKKVQEAWDKVDDKYAVSSLAVSGFVALWASAG 120

Query: 121 VVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 157
           VVSAIDRLPL+PGLLELVGIGYTGWFAYKNLIFRPDR
Sbjct: 121 VVSAIDRLPLIPGLLELVGIGYTGWFAYKNLIFRPDR 157

[Close]

BLAST of Cucsat.G1468 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 174.5 bits (441), Expect = 6.8e-44
Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 7   STFALSSSSTLLDSKAP-----RQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIA 66
           ++ ++SSSST++DS+AP       SAS  S + LPTLP      S  R  K+TAYCRKI 
Sbjct: 2   ASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQ----SHTRAAKATAYCRKIV 61

Query: 67  RNVMGMAT---GEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWAS 126
           RNV+  AT   GE PA     E  E+PEIVK  QEAW+KV+DKYA+ SLA +G VALW S
Sbjct: 62  RNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGS 121

Query: 127 AGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158
           AG++SAIDRLPLVPG+LELVGIGYTGWF YKNL+F+PDR
Sbjct: 122 AGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDR 156

[Close]

BLAST of Cucsat.G1468 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 174.5 bits (441), Expect = 6.8e-44
Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 7   STFALSSSSTLLDSKAP-----RQSASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIA 66
           ++ ++SSSST++DS+AP       SAS  S + LPTLP      S  R  K+TAYCRKI 
Sbjct: 2   ASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQ----SHTRAAKATAYCRKIV 61

Query: 67  RNVMGMAT---GEVPAEVAAGELAEMPEIVKKVQEAWDKVEDKYAVSSLAVSGFVALWAS 126
           RNV+  AT   GE PA     E  E+PEIVK  QEAW+KV+DKYA+ SLA +G VALW S
Sbjct: 62  RNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGS 121

Query: 127 AGVVSAIDRLPLVPGLLELVGIGYTGWFAYKNLIFRPDR 158
           AG++SAIDRLPLVPG+LELVGIGYTGWF YKNL+F+PDR
Sbjct: 122 AGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDR 156

[Close]

BLAST of Cucsat.G1468 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-15
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 77  AAGELAEMP---EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 136
           A+GE ++     ++V  +Q  WDK ED+  +  L  +G VALWAS  +++AID+LP++  
Sbjct: 56  ASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISS 115

Query: 137 LLELVGIGYTGWFAYKNLIFRPDR 158
             ELVGI ++ WF Y+ L+F+PDR
Sbjct: 116 GFELVGILFSTWFTYRYLLFKPDR 139

[Close]

BLAST of Cucsat.G1468 vs. TAIR 10
Match: AT1G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 4.3e-14
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 77  AAGELAEMP---EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPG 136
           A+GE ++     ++V  +Q  WDK ED+  +  L  +G VALWAS  +++AID+LP++  
Sbjct: 56  ASGESSDSSTDLDVVSTIQN-WDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISS 115

Query: 137 LLELVGIGYTGWFAYKNLIFRPDR 158
             ELVGI ++ WF Y+ L+F+PDR
Sbjct: 116 GFELVGILFSTWFTYRYLLFKPDR 138

[Close]

BLAST of Cucsat.G1468 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-12
Identity = 43/141 (30.50%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 26  SASPSSTVPLPTLPSPPTPLSQIRPWKSTAYCRKIARNVMGMATGE-------VPAEVAA 85
           +AS S  V +P +P+  T  S +      ++ R      + + +G        +    ++
Sbjct: 6   AASSSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS 65

Query: 86  GELAEMP--EIVKKVQEAWDKVEDKYAVSSLAVSGFVALWASAGVVSAIDRLPLVPGLLE 145
            E + +   E++  ++E WD +E+K  V        VA+W S+ VV AI+ +PL+P ++E
Sbjct: 66  EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVME 125

Query: 146 LVGIGYTGWFAYKNLIFRPDR 158
           LVG+GYTGWF Y+ L+F+  R
Sbjct: 126 LVGLGYTGWFVYRYLLFKSSR 146

The following BLAST results are available for this feature:

BLAST of Cucsat.G1468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCA1	9.6e-43	60.38	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M812	3.2e-14	42.86	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04616	7.4e-11	30.50	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LDD3	1.2e-05	29.47	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8YX97	6.7e-04	35.29	Valine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=1...	[more]

BLAST of Cucsat.G1468 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140528.1	1.36e-100	100.00	protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN46474.1 hypo...	[more]
XP_038906765.1	4.37e-97	95.54	protein CURVATURE THYLAKOID 1B, chloroplastic [Benincasa hispida]	[more]
XP_008459821.1	1.07e-95	96.20	PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis melo] >KAA0039...	[more]
XP_022992417.1	1.40e-93	92.36	protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita maxima]	[more]
XP_022929793.1	4.02e-93	92.36	protein CURVATURE THYLAKOID 1B, chloroplastic [Cucurbita moschata] >XP_023547749...	[more]

BLAST of Cucsat.G1468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCB7	6.60e-101	100.00	CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G095900 PE=4 S...	[more]
A0A5A7T8Q0	5.16e-96	96.20	Protein CURVATURE THYLAKOID 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CCA4	5.16e-96	96.20	protein CURVATURE THYLAKOID 1B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1JPR9	6.78e-94	92.36	protein CURVATURE THYLAKOID 1B, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ET79	1.94e-93	92.36	protein CURVATURE THYLAKOID 1B, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Cucsat.G1468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46820.1	6.8e-44	60.38	photosystem I P subunit	[more]
AT2G46820.2	6.8e-44	60.38	photosystem I P subunit	[more]
AT1G52220.1	2.3e-15	42.86	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G52220.2	4.3e-14	42.86	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G01150.1	5.3e-12	30.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 89..145 e-value: 4.9E-17 score: 61.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR33222:SF9	PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC	coord: 1..145
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1468.T1	Cucsat.G1468.T1	mRNA
Cucsat.G1468.T3	Cucsat.G1468.T3	mRNA
Cucsat.G1468.T5	Cucsat.G1468.T5	mRNA
Cucsat.G1468.T6	Cucsat.G1468.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity