Cucsat.G14647 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G14647
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	F-box protein At3g07870-like
Location	ctg1869: 2867702 .. 2869849 (+)
RNA-Seq Expression	Cucsat.G14647
Synteny	Cucsat.G14647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCCAAAGTTTTGCGAAGGTTTGACAGTTCGTGAGTCTCATCACTTCCAACTCATCATTTCTTTTTTTAATCTTGCATGATCCCAAGAATGGGAAGTCGGAGAAACTTAATCAAATCGAGGAGGAAGTTCAGAAATCTTTCTGCATTTACATCATTGACTACCTCCATTTCCATTCTCTTCCCAACATTTTGGCAGGGATGCTGCTGCTGCTTGATTCTTGTATCCATCCTCCTTTCTTGCTTGATTTTTATCTTTCAATTACTTTTATTTATTTCTATTGATGCATATAATTAATTTTGGACAGTCTCATCTCCAAGTGGTTCATCCATTGGTGTCTGAACGTAAAAGATTGAGAAAATCTGTTGTTCTCCATTTGGAGTTAAGGGACCATAATTTGAAGAAATTTCTTGGAGTTCAACTACATATTAATGAACAGATATTTAATGGCAGACCATATCTAACAACTTATGGTCAACAATTTAAACTAATTCGTATAAATATTTGATATTTTTTAAAAAAAATTGACCATTTCTCATAATATAATTCATTAAGATTTAGAAACGTATATGCCAAAATATACAAATTGTTGAGAAGTCAGCAAATTTTCAGGAAGCTAAATCGAGAAGCTAAGTAGCTTCACTTTTTAAAAGTGATTTTGATAGATTAATAATAATTTAGTTTGTATGATTTCCCATAATCACTTTCTAAACGAGGCTGACGCCGACGCCGTAGACTGCATTGATTTTTCTACCTTAGCTCTTGTTGTTAACGATTGGTATGCTTCTAATCTCCATTTCTGTCTTTCTTCTCAATACCCGAATAACAAAGTAAAACAAAAAATATTATCCTTACGGAAAATTGGGATTGGGGTGTGATTTGTTTGGTTGTTCCGATTCCATTTTGATTTGTGGCATCTGTTTGAGTCTTTGATCATATGTATATTGATCTCTTCAGCCTTAGCTGTAAATTTATATGAATTTATCAGAGAATGAGACAACAAGTAATCCAGTTTCATTCTCTTTCCATTGATTATATTTGTATATTTGTTTTCCAAGGTTGAAGTAGATGGGGAAGAAGTGGAACAGCAAGAGCATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGAAGCTTCAACCATTTTCCAATTTATTCACTTGCAGGCTAGTGAGTAAAGTTTGGAACGATTGCATTTCAAGTTTTAAGTTTGAGTCCAACCTTTTCATTACCCAAATTTCTCCTAGTCGTAATCGTAGACGTAATCGTAATCGCTTTGACTGTGTGGACTTGGATCCTAAACATTTTGATGGGATGAATCTTATTGGGTCATTTAAGTTGCATTCTTCATGGTGCTCCTCCTCTACTGGAATTGTCAATAGTTGTAATGGATTTCTTTGTATCTTGAATACCAAACGTGTTGCAATGTTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGTACTCAATATGAGTTGTCCGTTTATGGACTTGGTTATAGTCCCAAGACAAAGGGGTACAAAGTAGGAAGACATTCGTACAAAAATGGTGAGTTGTTAGTAGAGATTTTAGCATTTGGCACAAGTTTGGAGGATCAAGATGGGAAGGTTCAAAGTCAATGGAGACAGGTAGCTAGCATGAGTACAACCTATAAAATGTATCGCCATGGTACTTACTTT

Coding sequence (CDS)

ATGGGGAAGAAGTGGAACAGCAAGAGCATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGAAGCTTCAACCATTTTCCAATTTATTCACTTGCAGGCTAGTGAGTAAAGTTTGGAACGATTGCATTTCAAGTTTTAAGTTTGAGTCCAACCTTTTCATTACCCAAATTTCTCCTAGTCGTAATCGTAGACGTAATCGTAATCGCTTTGACTGTGTGGACTTGGATCCTAAACATTTTGATGGGATGAATCTTATTGGGTCATTTAAGTTGCATTCTTCATGGTGCTCCTCCTCTACTGGAATTGTCAATAGTTGTAATGGATTTCTTTGTATCTTGAATACCAAACGTGTTGCAATGTTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGTACTCAATATGAGTTGTCCGTTTATGGACTTGGTTATAGTCCCAAGACAAAGGGGTACAAAGTAGGAAGACATTCGTACAAAAATGGTGAGTTGTTAGTAGAGATTTTAGCATTTGGCACAAGTTTGGAGGATCAAGATGGGAAGGTTCAAAGTCAATGGAGACAGGTAGCTAGCATGAGTACAACCTATAAAATGTATCGCCATGGTACTTACTTT

Protein sequence

MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHGTYF

Homology

[Close]

BLAST of Cucsat.G14647 vs. ExPASy Swiss-Prot
Match: Q9FT50 (Putative F-box protein At3g52320 OS=Arabidopsis thaliana OX=3702 GN=At3g52320 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-05
Identity = 42/153 (27.45%), Postives = 70/153 (45.75%), Query Frame = 0


Query: 14  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPS-----RNRR 73
           E+P ++L+ IL++L P  +L   + VSK+W   I+S ++ +N F    SPS        R
Sbjct: 26  EIPEEMLIDILIRL-PAKSLMRFKCVSKLWLSLITS-RYFTNRFFKPSSPSCLFAYLVDR 85

Query: 74  RNRNRFDCV--DLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLN 133
            N++++  +      +H      +     HS+       +VN+  G LC    +RV + N
Sbjct: 86  ENQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLCYRTGRRVKVCN 145

Query: 134 PMTNEYMELPSSTQYELSVYGLGYSPKTKGYKV 160
           P T + +ELP            G+ P    YKV
Sbjct: 146 PSTRQIVELPIMRSKTNVWNWFGHDPFHDEYKV 176

[Close]

BLAST of Cucsat.G14647 vs. NCBI nr
Match: XP_004137594.1 (F-box protein At5g65850 [Cucumis sativus])

HSP 1 Score: 437 bits (1124), Expect = 8.05e-155
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQ 60
           MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQ
Sbjct: 1   MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQ 60

Query: 61  ISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTK 120
           ISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTK
Sbjct: 61  ISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTK 120

Query: 121 RVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSL 180
           RVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSL
Sbjct: 121 RVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSL 180

Query: 181 EDQDGKVQSQWRQVASMSTTYKMYRHGTYFYNL 213
           EDQDGKVQSQWRQVASMSTTYKMYRHGTYFYNL
Sbjct: 181 EDQDGKVQSQWRQVASMSTTYKMYRHGTYFYNL 213

[Close]

BLAST of Cucsat.G14647 vs. NCBI nr
Match: TYJ98917.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (808), Expect = 2.57e-104
Identity = 161/205 (78.54%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 9   SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRR 68
           +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RR
Sbjct: 4   NIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RCRR 63

Query: 69  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 128
           R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPM
Sbjct: 64  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPM 123

Query: 129 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG--- 188
           TNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   
Sbjct: 124 TNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQN 183

Query: 189 KVQSQWRQVASMSTTYKMYRHGTYF 210
           +VQSQWR V S+STTYKM+RHGTYF
Sbjct: 184 EVQSQWRHVVSISTTYKMHRHGTYF 206

[Close]

BLAST of Cucsat.G14647 vs. NCBI nr
Match: XP_008447090.1 (PREDICTED: F-box/LRR-repeat protein At2g43260-like [Cucumis melo])

HSP 1 Score: 315 bits (808), Expect = 2.83e-104
Identity = 161/205 (78.54%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 9   SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRR 68
           +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RR
Sbjct: 7   NIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RCRR 66

Query: 69  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 128
           R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPM
Sbjct: 67  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPM 126

Query: 129 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG--- 188
           TNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   
Sbjct: 127 TNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQN 186

Query: 189 KVQSQWRQVASMSTTYKMYRHGTYF 210
           +VQSQWR V S+STTYKM+RHGTYF
Sbjct: 187 EVQSQWRHVVSISTTYKMHRHGTYF 209

[Close]

BLAST of Cucsat.G14647 vs. NCBI nr
Match: KGN64030.1 (hypothetical protein Csa_013491 [Cucumis sativus])

HSP 1 Score: 289 bits (740), Expect = 3.69e-93
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 69  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 128
           RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM
Sbjct: 162 RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 221

Query: 129 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQ 188
           TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQ
Sbjct: 222 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQ 281

Query: 189 SQWRQVASMSTTYKMYRHG 207
           SQWRQVASMSTTYKMYRH 
Sbjct: 282 SQWRQVASMSTTYKMYRHA 300

[Close]

BLAST of Cucsat.G14647 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 146 bits (368), Expect = 3.95e-38
Identity = 102/231 (44.16%), Postives = 125/231 (54.11%), Query Frame = 0


Query: 1   MGKKWNSK-SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFE-----S 60
           M KK  SK    +SELP DIL  I  KL PF NL TCRLVS  WN+ + S KF+     S
Sbjct: 1   MEKKPKSKIKTTNSELPPDILQLIFSKL-PFFNLPTCRLVSATWNNLVLSCKFDPSISIS 60

Query: 61  NLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSST--GIVNSCNG 120
           NLF       R+R  +     CVDLDP+H +GM+ + SF  H +  S S    I+NSC+G
Sbjct: 61  NLFFAHFYSCRDRNLH-----CVDLDPQHLEGMSTVASFTFHPNVSSGSCKISIINSCSG 120

Query: 121 FLCILNTKR---------VAMLNPMTNEYMELPSSTQYELSV----YGLGYSPKTKGYKV 180
            + +L TKR         V +LNPMTNEY +LP+      SV    YGLG+SP+TK YK+
Sbjct: 121 LISLLITKRRRRGHRPGVVCVLNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKL 180

Query: 181 GRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHGTYF 210
            R  Y   E +VEI AFGTS E         W  V S+      Y HG YF
Sbjct: 181 ARTHYVCHEFIVEIFAFGTSCE---------WTPVGSVPYFLNEY-HGVYF 215

[Close]

BLAST of Cucsat.G14647 vs. ExPASy TrEMBL
Match: A0A5D3BIH1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001140 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 1.25e-104
Identity = 161/205 (78.54%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 9   SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRR 68
           +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RR
Sbjct: 4   NIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RCRR 63

Query: 69  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 128
           R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPM
Sbjct: 64  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPM 123

Query: 129 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG--- 188
           TNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   
Sbjct: 124 TNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQN 183

Query: 189 KVQSQWRQVASMSTTYKMYRHGTYF 210
           +VQSQWR V S+STTYKM+RHGTYF
Sbjct: 184 EVQSQWRHVVSISTTYKMHRHGTYF 206

[Close]

BLAST of Cucsat.G14647 vs. ExPASy TrEMBL
Match: A0A1S3BGK6 (F-box/LRR-repeat protein At2g43260-like OS=Cucumis melo OX=3656 GN=LOC103489611 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 1.37e-104
Identity = 161/205 (78.54%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 9   SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRR 68
           +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RR
Sbjct: 7   NIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RCRR 66

Query: 69  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 128
           R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPM
Sbjct: 67  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPM 126

Query: 129 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG--- 188
           TNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   
Sbjct: 127 TNEYMELPSRTEYQSSVYGLGYSPKTKQYKVARHSFKNDELFVEILAFDTSLADQDGNQN 186

Query: 189 KVQSQWRQVASMSTTYKMYRHGTYF 210
           +VQSQWR V S+STTYKM+RHGTYF
Sbjct: 187 EVQSQWRHVVSISTTYKMHRHGTYF 209

[Close]

BLAST of Cucsat.G14647 vs. ExPASy TrEMBL
Match: A0A0A0LQ77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038970 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.79e-93
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 69  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 128
           RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM
Sbjct: 162 RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPM 221

Query: 129 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQ 188
           TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQ
Sbjct: 222 TNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQ 281

Query: 189 SQWRQVASMSTTYKMYRHG 207
           SQWRQVASMSTTYKMYRH 
Sbjct: 282 SQWRQVASMSTTYKMYRHA 300

[Close]

BLAST of Cucsat.G14647 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 1.43e-37
Identity = 86/212 (40.57%), Postives = 119/212 (56.13%), Query Frame = 0


Query: 14  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNR 73
           ELP DIL QI  K+ PF NL TCRLVS+ WN+ ISS KF+ +  I  +  +R        
Sbjct: 14  ELPPDILQQIFSKI-PFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRN 73

Query: 74  FDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGI--VNSCNGFLCILNTKR---------V 133
             CV+ DP+H +GM+++ SF  H  +CS+S+ I  +NSC+G + +L TKR         V
Sbjct: 74  LHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVV 133

Query: 134 AMLNPMTNEYMELPS----STQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGT 193
            +LNP+TNEY + P+      +     YGLG+SPKT  YK+ R  + + E +V+I AFGT
Sbjct: 134 CVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT 193

Query: 194 SLEDQDGKVQSQWRQVASMSTTYKMYRHGTYF 210
           S E         W  + S+      Y HG YF
Sbjct: 194 SCE---------WTPIGSVPNFLNEY-HGVYF 214

[Close]

BLAST of Cucsat.G14647 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 1.43e-37
Identity = 86/212 (40.57%), Postives = 119/212 (56.13%), Query Frame = 0


Query: 14  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNR 73
           ELP DIL QI  K+ PF NL TCRLVS+ WN+ ISS KF+ +  I  +  +R        
Sbjct: 14  ELPPDILQQIFSKI-PFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSRHRN 73

Query: 74  FDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGI--VNSCNGFLCILNTKR---------V 133
             CV+ DP+H +GM+++ SF  H  +CS+S+ I  +NSC+G + +L TKR         V
Sbjct: 74  LHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITKRRRRGQRRDVV 133

Query: 134 AMLNPMTNEYMELPS----STQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGT 193
            +LNP+TNEY + P+      +     YGLG+SPKT  YK+ R  + + E +V+I AFGT
Sbjct: 134 CVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIFAFGT 193

Query: 194 SLEDQDGKVQSQWRQVASMSTTYKMYRHGTYF 210
           S E         W  + S+      Y HG YF
Sbjct: 194 SCE---------WTPIGSVPNFLNEY-HGVYF 214

The following BLAST results are available for this feature:

BLAST of Cucsat.G14647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT50	1.7e-05	27.45	Putative F-box protein At3g52320 OS=Arabidopsis thaliana OX=3702 GN=At3g52320 PE...	[more]

BLAST of Cucsat.G14647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137594.1	8.05e-155	100.00	F-box protein At5g65850 [Cucumis sativus]	[more]
TYJ98917.1	2.57e-104	78.54	F-box/LRR-repeat protein [Cucumis melo var. makuwa]	[more]
XP_008447090.1	2.83e-104	78.54	PREDICTED: F-box/LRR-repeat protein At2g43260-like [Cucumis melo]	[more]
KGN64030.1	3.69e-93	99.28	hypothetical protein Csa_013491 [Cucumis sativus]	[more]
XP_038880514.1	3.95e-38	44.16	putative F-box protein At1g46984 [Benincasa hispida]	[more]

BLAST of Cucsat.G14647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIH1	1.25e-104	78.54	F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BGK6	1.37e-104	78.54	F-box/LRR-repeat protein At2g43260-like OS=Cucumis melo OX=3656 GN=LOC103489611 ...	[more]
A0A0A0LQ77	1.79e-93	99.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038970 PE=4 SV=1	[more]
A0A5D3CIX9	1.43e-37	40.57	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BQV8	1.43e-37	40.57	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 15..56 e-value: 4.2E-7 score: 39.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 13..52 e-value: 6.0E-8 score: 32.4
None	No IPR available	GENE3D	1.20.1280.50		coord: 11..61 e-value: 7.0E-6 score: 27.7
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 22..209
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 22..209
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 108..179 e-value: 6.7E-11 score: 39.9
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 13..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G14647.T4	Cucsat.G14647.T4	mRNA
Cucsat.G14647.T3	Cucsat.G14647.T3	mRNA
Cucsat.G14647.T2	Cucsat.G14647.T2	mRNA
Cucsat.G14647.T1	Cucsat.G14647.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding