Cucsat.G1463 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTAAAAATGCCAAAAAAAACTCAAAACCTTTTTTCATATCTTTGCAGTACCCTTACGATATCCTATCTCTTTTGCTTTCTCCTTTAGTCCTTTTTAACACAAATACTAAAATTTCTCAAAACAAAGAAACATATGTTAACTATGGAGTGTAAACCACAACAAAGAGACCACAATTCTTCGTTTCCAAATCTACCATTATTTTCAATCCCACACCTATCGCCAATGGACTCACCACAACATTCTGGGATGCTAACTCCACCAATCTACACCGCCGTCTCGGTCCCGTTCTGGTGGGAAGAAGAGCCAGGCAAGCCTAGGTTTAGTACCGCCGTTTCCGTCTCTGCCTCTCCCAGCCTAGAGTTGCCTCCTAGGCTTTTGGTGCCAAGATCGGAGTGTAGTTCTTCCTTTAGATTTGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGTTCATGGAGAAAAAGGGGTTTGAATTTGAGAGGGAAAAGAGAGCAAATTGGAACTGGAGGGCTTGTGTTTCCATCTTTGGAATTGGAAGAGAGTCTTAGTTCAAAAGTGGAAGCTTCAAGGTTTAGAAGGAATGGGAGCTTTTCAAGCTTGATGAGTAGTACTCAAATTAAGCCTCATTTTTGGGTTAAGTATTTCCTCAATTAATTGTGTGTTTGATTAAGTCTTCCTATAGATTCATTTTGATTTTTCAAAAAAGGTTAATTAGTGTTCGATCTCACAAATTAGAAAAGAGTTAAAATTTAGTCCATATGATTTTAAAAGTTAAAATTTACAATTCGTTTGATAAAAACCTATCTCGTAATTAAATAAGTTTTTAGAGTTTCATAAAATTATCCATACATATCAATTGTTTATAGTGGCTAAATTCTAATTATAAATTATATAAAAAAATCTAAACTTTTCTTTTTCTTATGATAGGTGGCTTAACTACTTTATATATGTTAACTTTTTGGTGTTGCAGGAAAGTGTATGTGAAGGTTTGAAGCATATAGTTCCATCATGGAGAAGCAGAAGGATGAAAAGAGAGACTTAGTTTGATTTTGTGTTGTTAGATGTAATTTTCGACCCATTGCAATAATGGAAGTTCCAAAGTCTGTTGATATCTATGTGCTGCTATTTGTTGTGCACATTCATATATAATGCTAGTTTAATTAGCAAGTTGTGTTTTAATTTCTCGATGTGTTTTCAAGACTGTTTCCATAACATATATAAATGGTGTAAACTTTGCTCTTAGCCTTATCTATAACATATGGGCTCTTTCTCTCT ATGTTAACTATGGAGTGTAAACCACAACAAAGAGACCACAATTCTTCGTTTCCAAATCTACCATTATTTTCAATCCCACACCTATCGCCAATGGACTCACCACAACATTCTGGGATGCTAACTCCACCAATCTACACCGCCGTCTCGGTCCCGTTCTGGTGGGAAGAAGAGCCAGGCAAGCCTAGGTTTAGTACCGCCGTTTCCGTCTCTGCCTCTCCCAGCCTAGAGTTGCCTCCTAGGCTTTTGGTGCCAAGATCGGAGTGTAGTTCTTCCTTTAGATTTGATGAGAAGAGTTCTTTGTTTATGAAGAAAAGAGGATGGTTTGGTTCATGGAGAAAAAGGGGTTTGAATTTGAGAGGGAAAAGAGAGCAAATTGGAACTGGAGGGCTTGTGTTTCCATCTTTGGAATTGGAAGAGAGTCTTAGTTCAAAAGTGGAAGCTTCAAGGTTTAGAAGGAATGGGAGCTTTTCAAGCTTGATGAGTAGTACTCAAATTAAGCCTCATTTTTGGGAAAGTGTATGTGAAGGTTTGAAGCATATAGTTCCATCATGGAGAAGCAGAAGGATGAAAAGAGAGACTTAG MLTMECKPQQRDHNSSFPNLPLFSIPHLSPMDSPQHSGMLTPPIYTAVSVPFWWEEEPGKPRFSTAVSVSASPSLELPPRLLVPRSECSSSFRFDEKSSLFMKKRGWFGSWRKRGLNLRGKREQIGTGGLVFPSLELEESLSSKVEASRFRRNGSFSSLMSSTQIKPHFWESVCEGLKHIVPSWRSRRMKRET Homology
BLAST of Cucsat.G1463 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.7e-05 Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of Cucsat.G1463 vs. NCBI nr
Match: XP_004140632.2 (uncharacterized protein At4g00950 [Cucumis sativus] >KGN46492.1 hypothetical protein Csa_005492 [Cucumis sativus]) HSP 1 Score: 393 bits (1010), Expect = 4.20e-138 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Cucsat.G1463 vs. NCBI nr
Match: XP_008459763.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo]) HSP 1 Score: 362 bits (928), Expect = 1.44e-125 Identity = 181/195 (92.82%), Postives = 187/195 (95.90%), Query Frame = 0
BLAST of Cucsat.G1463 vs. NCBI nr
Match: XP_038875382.1 (uncharacterized protein At4g00950-like [Benincasa hispida]) HSP 1 Score: 294 bits (752), Expect = 3.87e-98 Identity = 157/208 (75.48%), Postives = 167/208 (80.29%), Query Frame = 0
BLAST of Cucsat.G1463 vs. NCBI nr
Match: ADN34228.1 (hypothetical protein [Cucumis melo subsp. melo] >KAA0039769.1 DUF688 family protein [Cucumis melo var. makuwa] >TYK24728.1 DUF688 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 223 bits (568), Expect = 9.92e-72 Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Cucsat.G1463 vs. NCBI nr
Match: KAG7025335.1 (hypothetical protein SDJN02_11830, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214 bits (544), Expect = 5.22e-67 Identity = 125/205 (60.98%), Postives = 142/205 (69.27%), Query Frame = 0
BLAST of Cucsat.G1463 vs. ExPASy TrEMBL
Match: A0A0A0KDR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103510 PE=4 SV=1) HSP 1 Score: 393 bits (1010), Expect = 2.03e-138 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Cucsat.G1463 vs. ExPASy TrEMBL
Match: A0A1S3CBE3 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103498800 PE=4 SV=1) HSP 1 Score: 362 bits (928), Expect = 6.97e-126 Identity = 181/195 (92.82%), Postives = 187/195 (95.90%), Query Frame = 0
BLAST of Cucsat.G1463 vs. ExPASy TrEMBL
Match: A0A5A7TEV4 (DUF688 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002880 PE=4 SV=1) HSP 1 Score: 223 bits (568), Expect = 4.80e-72 Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Cucsat.G1463 vs. ExPASy TrEMBL
Match: E5GCM9 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 223 bits (568), Expect = 4.80e-72 Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of Cucsat.G1463 vs. ExPASy TrEMBL
Match: A0A6J1H8B1 (uncharacterized protein At4g00950-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460982 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 1.28e-65 Identity = 124/203 (61.08%), Postives = 140/203 (68.97%), Query Frame = 0
BLAST of Cucsat.G1463 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12 Identity = 65/188 (34.57%), Postives = 83/188 (44.15%), Query Frame = 0
BLAST of Cucsat.G1463 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 0
BLAST of Cucsat.G1463 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 5.7e-08 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 0
BLAST of Cucsat.G1463 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 5.7e-08 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 0
BLAST of Cucsat.G1463 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06 Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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