Cucsat.G14013 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14013
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg1869: 1274063 .. 1277303 (-)
RNA-Seq ExpressionCucsat.G14013
SyntenyCucsat.G14013
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAGATGTGCAGAACCCAGGACCTGATTTCAACTGCTTCAAAATCAAGTTTTCTTCTCATGGAACTACAAGTAAGTTTTAGTTTAGATCATATCCTGTTCAGTATAATTAAGGTAGGTAGGAGTCTAATAGCCCATTTCGATTGACTTCAAGAACTTTTTTTTAAAAAAGAAATATTTAAACTCTTCGAATAAAAACTTTTTAAATAAGCTTCAAAAGCAAAAGCTATTTTATGATGTTGCCTGAAAAAGTGAAAGTTTAAGATCTCATTCGACATAAAATTCAAATTTATATATAATACACATATTAGTTTTTAAAATTTGAACCTATTACACATGAAATTAAATTTGAAAGTTTGGAGGTACATATGCACGCTTCAAACTTGAGAAACTAAACTTCTAATTTAATTTGGATTTTGAAAAGAGTTCTTCCATCTATTTCATGATCATCTTTTCAGAATATGTAGCTTTTGAATATCATTTACATTTCCCTGTTTGGAATATGAACAAATAAGTATCATTCTCTAAGGAGACATACTTTGGAACATTATTTTAAAATGAGATATCTATTGATAGTTATCAAACTCTCCATAAATGATTGATTTTAAAATGTTGAAAAATAAATTATTTAAAGCCGTAAATGATCCAAATTCGAGTTTGTTTGAAAATGAATCTCAAAGCTTCAACCAAATTAGAAGGTTGCAAAATACATGTTCCAATTTATTGAAATAGTTTCTCTTCACTTATTATTGTTCTTTTTTAGGAAACTTAACTTGGTACTTGTTTTTTCTTTTTTAAAATAAAAAAGTAGATGTGTAATCCTGATCTTGACAATGATTTAACAACCTTTTTTTTTTCTTCTCACTGTATAATATTAAACAGTTTATTTTAACCTTATAGTTGTGAAAACCAAATTAAACCTTCTTAGAGTGAGAGAGGACAACAACTACAATGCTTTATTTTGCTTCACTTTCCCCATTTTTTCCTTTTTTTTTTCTTTCTAAATCTCCAACTGGGGTTGATTTTAATTTATCATTAAAATCATTCTGACTACCAAAAATAATTCTACATCCAATTTATTTGTTATTGCTTTCAAGATTTTTTTTTTTTAATAATTGCAATTATATCATTTGCAAAATATTGTATTATTGTTAAGTCAAGTCACAATATTCATGAGTTTGAGTTTATATATCAATTTGTTCTTGAACTTAGGTCACACCTAAAGAAACATATTAAAAAGATAGCCAAGGAAGATTTTGTAATCGTTAAGCTATTAAACCCTATTTTTGGTAATTGTTTTGTTTAAAATTTATCTAAGCTTTTATATGGTAAATTGGGCTGGGCTTGTTGGTTATCCAATATGAAATGTGGTAGGTTGTTTACACAAAGAGGGCCCGATCATAGGCCTATCTAAAGCCCAACTTCTTTTTGTTAGGTTACTCTTCTTTCTTTCTACCTTTTTCCTTTAATATAATTATTCTTTTGTTCTTTTTAAATACTTTGATTCATTTAAATCTTTATAATTAATTTACTCAAGGTTGGCCTTTGGTAGCTTGTTCACAATTATATTTGATGATAATTAATTTTAATTTATACACGATAACACTTGCAATTCCTATAAATAATCTCATAACTCCTTCATAGCAGAATAGAACTACCAAGAAAGCCTCTTTCTCTAGTTGTTCAATTAATTTCTTTTTTGGTCAAATTTTAGAACATTTTGATTTAGAAATAAAAAGCAAGATGATATAGGGCTTATTTGATAACATTATCATTGCCTTTTTTCGATTTTTTCATTTTTCAAGTAATCGATTTGTTTTAATATTTTTAAATTCTAAAAAACGATAAGGAATAAATTCTATTTGTATTTTTCGTTATATATATATATATATATATATATAATTGTTCCCTAGTTTTTAACAAAGGTTGGCTTGGGTTCCAATGGCAATGGGAGGTCCTTACTAAGGTTCTTGTTTCAGGTCCAATTTGTCCAATATCTTTCTTTAATTATTTCTTAATTTTATATCGGTACATTTTTAAATTTTAATTTACCTTTTAACTTTTAATCACTCTGAATTGGTTAGAATTTTGCAATGGGTTCATTTGTTTCTTTAGTATCTATTAAATATTTCACAGGTAAATCATTTACAAAAGCACTATAAGACTAATTCAGCGTTATTTGAGGTGAATGCTGACTCAAGTAACAAATAACAATGCAGATCATATTTGAATAACACTGAAAAATAGAAACAATTGTATCATTGTTGTTAATTTTGGATAGGGGTTAATCTGTATCAGATGTATATTTTTATAACTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTATGGATGTTATATATTTCTTATATTATAAAATTAGACTATATTTAAACTATAAAATAAGTAAAACAAAACAGAAGAAATAGTTATTAAATAAACTCAACTCGAAAAAAATGAATCAAGTTACATTTAGTTTCAAATTGACACATGTCATACGAGAAAAGAGTCGTCATTCAACAAATTAACTATATGTTTTCTTAAATTATATTTATTATTAAAAAGAAAGAAAGTATAAAGCAAAGTAAGGTTAAGACAAAAACATGGAAGCATTGAACCAACAAACAATCAATAGGTTCAGTAAGCCAAGTCTTTGCCGGACTTTAGTCAGTCAAAGTTCAAGTAATTGTTTTATTAAAATTCCTAACACCTCTTTTAATTTATTGACCAAATACAAAATTACATATTTTCATTATATAATAATCTCTCCTCTATAAGAACAAAGATAAAAAGGGAAGCACTGACTTTAGAGAAAAGAAAGCTCAATTCTTTACTCTTTTGTTCTAATTAAAAGATATATCAAATTTTGTATTCTTTTTAACATTGCTATATATATTTTTATAATGTTTAGGATATGAAAAAGAAAGAAATGATTGAGCTGTCTCATAACGAACGCCTCTATATTAACGCACGTGCCTGCCGTCTAAGCATATTCCTATTCTTTCCCTTCAAATTCTTCACCCGCTTCCGTTCTCTTCCAAAATCCTCTCTCTTTCTTTTAACATTCAAACAGCTTCATCAACATCAACAATGGCGGATACCAACTCCACTCCCATTCTCAAAGATGACCTCGATATCGTCATCCCCACCATCCGTAACCTCGACTTCCTTGAAATGTGGAGGCCATTTTTTCAGCCATATCATTTGATCATTG

Coding sequence (CDS)

CAGATGTGCAGAACCCAGGACCTGATTTCAACTGCTTCAAAATCAAGTTTTCTTCTCATGGAACTACAAGATATGAAAAAGAAAGAAATGATTGAGCTGTCTCATAACGAACGCCTCTATATTAACGCACGTGCCTGCCGTCTAAGCATATTCCTATTCTTTCCCTTCAAATTCTTCACCCGCTTCCGTTCTCTTCCAAAATCCTCTCTCTTTCTTTTAACATTCAAACAGCTTCATCAACATCAACAATGGCGGATACCAACTCCACTCCCATTCTCAAAGATGACCTCGATATCGTCATCCCCACCATCCGTAACCTCGACTTCCTTGAAATGTGGAGGCCATTTTTTCAGCCATATCATTTGA

Protein sequence

QMCRTQDLISTASKSSFLLMELQDMKKKEMIELSHNERLYINARACRLSIFLFFPFKFFTRFRSLPKSSLFLLTFKQLHQHQQWRIPTPLPFSKMTSISSSPPSVTSTSLKCGGHFFSHII
Homology
[Close]
BLAST of Cucsat.G14013 vs. NCBI nr
Match: KAG6587597.1 (hypothetical protein SDJN03_16162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 50.8 bits (120), Expect = 2.78e-05
Identity = 26/38 (68.42%), Postives = 26/38 (68.42%), Query Frame = 0 

Query: 81  HQQWRIPTPLPFSKMTSISSSPPSVTSTSLKCGGHFFS 118
           HQQWR   P  FS M S SSSPPS TSTS K GGHF S
Sbjct: 65  HQQWRTQFPPRFSVMNSTSSSPPSETSTSSKYGGHFSS 102

The following BLAST results are available for this feature:
BLAST of Cucsat.G14013 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G14013 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6587597.12.78e-0568.42hypothetical protein SDJN03_16162, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cucsat.G14013 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14013.T1Cucsat.G14013.T1mRNA