Cucsat.G1350 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1350
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like
Location	ctg1: 12134188 .. 12138833 (+)
RNA-Seq Expression	Cucsat.G1350
Synteny	Cucsat.G1350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTTATTTTTATAATATACTTAATTCCTCATATTATCCAACGCTTCAAAAGGACCCTAAGCTGCGCCCAATTCGGAGAGCAAGAAGCTCACGAAACGCCATAGCCATACCCATCCAAAACTATCTTCCGTCTAACTAAATATCAACTCTGCTTTCATTTTCCTTCAAAATTGAGCATTTCTTAGCCTTCTAATGGCTGCTACTCGCTTCAATTCTCTTTCGTTTTCCCCACTCCCATTATCCCTTCCTTCTCAATCTAATTGCCATTCTTTAGAACACAAACCTCCACTCTTTCCCCTCAGCCCCCTTATCCAGCTGAAGCTCGCAATTAAGCGTTCTAATGCCACCCATCCCGTCTTGAAGTTCAGTCGCCGTGCCACCACTGCAACCGTATCGTTTAGCCTCCCGGCTTCGTAGGATACGACTACTCTCTTGCTTTAGTTGCCGTTTTTTCTCAAGCCCTCATACCTAATATTTTCTTTGATTTTGCAGGAAACCTGAGGGCGTTCCTCCCGAGAAACTTCCGAAGTAAGTTTACCCACGAATGTTCCCCTTTTCAATTAGTGTCTTTATCCTGCATAGGTTGTGCTTAAGCGTTGTAAATTGGAGTTTTTCTTTTGTTGCATGTCTTCATTATGTGCTAATGTTATTTTTTAATTTAACTAATTATTTTGAAATTTAACGAGGGGTGATGATTATTTGGGTTGAACTGTAACTTTAGTCCTTATCAATTAGTTTTAAGACTTCAATTTCAGTGCCTGTCTGGGAGGTTTGGAATTAATTTTAAGGACTATGGTTGAAAGTACCATGTTGTGTGTTTGGAACTTTTTGCTGATATGTTGAGTAACCACATTCTAAAGTGGCAGATGTATGACCTCTTACTCACTGCATTTCATAGAACGACCTATTATTTGTTTCTATCGGGCTGTAGGACATTTTCATATCTATGTAAATTGCTATTTTATCATAGATGTTGAATCATTTGTTATATGACTTCTCCTTTTCCGCATTAGATTGTGAATTATTGCAGAACTTACAGTGATGTTAGTTGTTTGTTGAATTTGTGACGTATAAGATGGTCGGCAAGAGCAATAAAGTCATTTGCAATGGGAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACTGGCACAGAAGCATTGCTAATGGGAATTTTGATTGAGGGTTAGTATCCTTTCCAACTTTGAGGTTACACCAAATTCTTTTGTAATTATAGCCTTTTCATGATTATTATCAATTGGAGGGGTCTTCTTGATTAGTTTTGTGGTAGGGGTTCTCCTCAACCCTCCGCCTGTAGGCTGTGATTCTTGCTCTTTTGTTGAATATATCTTCTGTTTTCTATCAAAAAAAAGGTTATTTCTTATTTACATTTAGGTTTAAACTTACATATTAATTTTGTTTAGTTGAATGCAGTTAAGTTACAGAACTATATTACTCATGGTTCTTTTATTTTATTTTATTTGAATGGCTTGCATTCAGTATGTGGCACTACGAATGTTCATCCTTATTAGTTGTGCCATATTGTATACTGAAACATTTTTTCTAATAATATTTGTCCTCTCTCTACCTGTGGACGTAACTAACACATTGTTAATAAACCACGTATATCTATGTGTTGATCTTTCACATTCTTCATATTGATTAATTGTTGTTTTCATAACGTTTATTTATTTTTAAAGCTAGTATTCTAAAACCAATAAGAAAAAATCAATAGAATCTGATAAGAACCATATGACTCAGCTCCTTAGGAGTTAACATCTGAATTACTTTTAAAATCTGACTACTTTTTCCCACGTCCCATTCCAGCATAATTTATGATCTCTTCCATTGTATCTGATTCCTCTCATATTAAACTATAGAATTGTTTTGAAAAACTTATTTATGTTTAAGCAATTCAACATTGAAACTTATATTCATGTTAGCTCCTGCCAGTCGATGATTATGAGTAACCTATCTTATGGCACTAGGCTTGGGGCATTGCCCATATGCTTTTGGAATGTTCGTATGCTTAATTGCTAACAATCATGGCGAAGTGAACCACAATTTTCAACCTTGTTCAGAGAAAAGGGGATAGGAATATGATAGATAGCCTTAATTATATTTGACAACAGCATTGGGGAAGGATTTAAGAGCTCCCCAATCCCTTTAATTTTCATAAGAGAACCCAAATACAAATAACCCCAGTCACAATAAACAGTCCCCCTAAATACAGTCCTTCCACTGCCCAATCTAACTAACACCACCTTGGGCCCCACCTAAACACGTAAAAATTTACCCTTTAACTCTGTTTGCACACCTTCCTCCCTTCCAACGTGTATACACCTTATTAATTGGGGCATATCACAATTAAAGAAAAAACAATAAATTTGCATATTCCCTTTGATTGCAATCTTGTCATGCGTCATTGCTAGGTAATTTTTATTTTCTTGAATATATATATTCACATTCTTTTCAGGAACGAGTACTGCTGCCAAATTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGGGAAGAAACTGTAAAGCTACTTGGAAAAGCTGACATGTATTTCTGCAGTCCAGAGCATCCTCCATTGACTGAGCCTGCCCAGAAGGCACTTGATTGGGCTGTTGCAGAGAAGCTAAAGTCAGGTGAGATATTCTTCCTAATCATCCAGCAAATGAAATTCTTATTTAGCTTGAAACATGAAAGTGAATGATGATACTTGAGTTTTTTGCTGAACCCTTTATGCATTCACAATAGAAAAGAATGAGATGTTGGGATGACCAGTCTTCTGACTGCTGGTTGAACCATATTTTTAGTATTGCCTATTTCTACGAAGGGAGGTTTTGCATATTTTTGTCACGCATTTAACAGCTTGGTTGGAAAGTTAATCAGATTATTCTTCCTCGGCTAGGATAGTGAATAAAGGATTTCTGCATCACCCTTACCACAATAGAAAAGTGAATAGAGGATTTTAGAACCACCATTTTAGTCTAATGGTCAATAGTAAAGGTATTAGCAGGAATGAGTTCAAGTTATAGTGGCTGCCTACAGACATAGGATTTAATAGTTACTTTGACAACCAAATATAGTAGGGTCGGACAATTCTCTTGTGATAATAGTTGAGGAGCATTGGTGTTCCTGAGCACTCGTCAATATGTTTGAAAAAAGAAGAGATTATTATGCACTGCAAGTTATTGGCTGCCACTTCTTTCAAATGGTTTACAAGTTGTGCTTGCTTACAGGCAATTAAGACTTGGTTGTAAAGCATTTATTTTCTCATGTATCAAGTAACATCCACTTGCATAGATTTTTGCCAACTTTTTTGGCCATTTTAGTGAAGAAGGATTTTAGTATATGGTCCATCTTAGTAAAGAAGGATTTCAGTATACGGTCCATTTTAGTGAAGAAGGATCTCAGTACATCTTATCATCTAGTTATTCATAAAGGATGTACAATTGTGCACACGTATGCATGGACTTCTTGATGGTAGATTTCAACTACAATGATTATCACCTATGTGCATTTTGTTATGTAATTTTGCTTGTGGCAGTCCTCTGTAATTGAACCTAAGGACCTATATGCAGGCCAGTCTGGAGAAATAACTACAGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCGCAAGATCTTGGCCACCCTTGGCTTCGATGATGAGAAGGCAAAAGAGATTGCAAAAACCGTAAGCATTAAGTTGTTTTTATCTAGTTAGTACTGTAGCATCCTCAGTACTTGATGATATACTGCATTAAAACGTCTTTATTGTTCACAGGTGGACAAGGATGCAACTTTCAGTTATAAGTAGATGGATCATGTAGGAAGATGTGATGTGATTTTCATATTTTTGTGGATGGAATCCTCACAAAGGACCCTCCAAATGAGATTCACATGATTTGGATCCTCGTGCATCCATTTGGTGATATAGTGATTTGCCTGTTTAATCAGCACCTGCCGTTCGACATTATCAGCTTCATTTTGAATTGACTATTCTTGTTCAAACTTGTGGAGTGCTGGTATGATACGCTGCATTTCAGTGATCTCAGGAGTGTTCTCTGGCTTTTCTTGAACAAGCAACTTAAGTTGAACGGGAATAATTACCTCAATGATTAACACATCCCATTCTTAATTTAGTATTTGCAAGACATCCTCAATTACTTTTCAATTTTAGTATTTAATATTTTATCTTTGTTTCTTTAATTCTCCTTAATATATGGGGTCTTGCGTGCCAAAATTTGAACATTTTTTACTTTTTGATTCCTCCCACCTGTTGAAGCTTGTATGCCCAGGTAAATTCTTTTTGTGAATTTATAGGTAATTTTGATTTATGAGGTTAAGATTCTAGCCATTTAAATACGAAACATGCTCTACTTGACCTTTTTTGGATAATGCTCTTAGAACTTCATTGAGTATGCTATTTTGGATGTTCGAATTGTATAGCTATATATCTGTTTGAGAGAATAATAGCAAAAATAGTTGGTCGAAGGTTTAACAGTAATGGAAATTCTTAGCTTTCTGTTAAATTTTATTTGATCAGCTGTGTGTTAGATATCCATTAAGAGGCACGGCAAATTTCCAATTTTTTAAATTTGAGTTATGGTTTGACTC

Coding sequence (CDS)

ATGGCTGCTACTCGCTTCAATTCTCTTTCGTTTTCCCCACTCCCATTATCCCTTCCTTCTCAATCTAATTGCCATTCTTTAGAACACAAACCTCCACTCTTTCCCCTCAGCCCCCTTATCCAGCTGAAGCTCGCAATTAAGCGTTCTAATGCCACCCATCCCGTCTTGAAGTTCAGTCGCCGTGCCACCACTGCAACCGTATCGTTTAGCCTCCCGGCTTCGAAACCTGAGGGCGTTCCTCCCGAGAAACTTCCGAAATGGTCGGCAAGAGCAATAAAGTCATTTGCAATGGGAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACTGGCACAGAAGCATTGCTAATGGGAATTTTGATTGAGGGAACGAGTACTGCTGCCAAATTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGGGAAGAAACTGTAAAGCTACTTGGAAAAGCTGACATGTATTTCTGCAGTCCAGAGCATCCTCCATTGACTGAGCCTGCCCAGAAGGCACTTGATTGGGCTGTTGCAGAGAAGCTAAAGTCAGGCCAGTCTGGAGAAATAACTACAGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCGCAAGATCTTGGCCACCCTTGGCTTCGATGATGAGAAGGCAAAAGAGATTGCAAAAACCGTGGACAAGGATGCAACTTTCAGTTATAAGTAG

Protein sequence

MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSRRATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK

Homology

[Close]

BLAST of Cucsat.G1350 vs. ExPASy Swiss-Prot
Match: Q93WL3 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.7e-62
Identity = 132/233 (56.65%), Postives = 171/233 (73.39%), Query Frame = 0


Query: 8   SLSFSPLPLSLP-----SQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSRRA 67
           ++SF PL LS P      Q+   S   + PL   S L+  KL   + +    V K  R  
Sbjct: 5   TVSFIPLTLSNPRIFVSRQNGSPSSSSRIPL--TSSLLGKKLLATQPSHRCFVPKL-RCL 64

Query: 68  TTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIE 127
           T+A+   ++P ++PE    +K+PKWSARAIKS AMGELEARKLKYP+TGTEA+LMGIL+E
Sbjct: 65  TSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVE 124

Query: 128 GTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKS 187
           GTST AKFLR NG+TLFKVR+ET+ LLGK+DMYF SPEHPPLTEPAQKA+ WA+ EK KS
Sbjct: 125 GTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKS 184

Query: 188 GQSGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 235
              GE+TT +LLLG+WS+ +SAGR+IL  LGF+++KAKE+ K++++D   S+K
Sbjct: 185 DVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234

[Close]

BLAST of Cucsat.G1350 vs. ExPASy Swiss-Prot
Match: Q8GW78 (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 60  RRATTATVSFSLPASKPEGVPPE-KLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 119
           RR   + +S SLP + P+ V  + K PKWS RAIKSFAMGELEARKLKYPNTGTEALLMG
Sbjct: 67  RRIHKSAIS-SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMG 126

Query: 120 ILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAE 179
           ILIEGTS  +KFLRAN I L+KVREETVKLLGKADMYF SPEHPPLTE AQ+ALD A+ +
Sbjct: 127 ILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQ 186

Query: 180 KLKSGQSGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEI 222
            LK+G  GE+   H+LLGIWSE ES G KILATLGF DEK+KE+
Sbjct: 187 NLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKEL 229

[Close]

BLAST of Cucsat.G1350 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12
Identity = 53/173 (30.64%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 46  IKRSNATHPVLKFSRRATTATVSFSLPASKPEG---VPPEKLPKWSARAIKSFAMGELEA 105
           ++  NA   +L  S     + V+ +    +P G   VP     +++ +AIK   + + EA
Sbjct: 53  LRGCNALDTLLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEA 112

Query: 106 RKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHP 165
           R+L +   GTE +L+G++ EGT  AAK L++ GI L   R E  K++G+   +       
Sbjct: 113 RRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIA--VEI 172

Query: 166 PLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAGRKILATLGFD 215
           P T  A++ L+ ++ E  + G +  I + HLLLG+  E E    ++L  LG D
Sbjct: 173 PFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLENLGAD 222

[Close]

BLAST of Cucsat.G1350 vs. ExPASy Swiss-Prot
Match: Q9TM05 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog OS=Cyanidium caldarium OX=2771 GN=clpC PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 86  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITLFKVREET 145
           +++ +A+K   + + EAR+L +   GTE +L+GIL EGT  AAK L++ GITL   R E 
Sbjct: 35  RFTEKAVKVIMLAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKDARIEV 94

Query: 146 VKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAG 205
            K++G+   +       P T  A+K L+ A+ E+ +      + T HLLLG+  E E   
Sbjct: 95  EKIIGRGSGFVAI--EIPFTPRAKKILELAI-EESRILTHNYVGTEHLLLGLIKEGEGVA 154

Query: 206 RKILATLGFDDEKAK 220
            ++L  LG D  K +
Sbjct: 155 ARVLENLGVDLPKLR 166

[Close]

BLAST of Cucsat.G1350 vs. ExPASy Swiss-Prot
Match: P31542 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4B PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 75  KPEG---VPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFL 134
           +P G   VP     +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAK L
Sbjct: 80  RPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVL 139

Query: 135 RANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTG 194
           ++ GI L   R E  K++G+   +       P T  A++ L+ ++ E  + G +  I + 
Sbjct: 140 KSMGINLKDARVEVEKIIGRGSGFVA--VEIPFTPRAKRVLELSLEEARQLGHN-YIGSE 199

Query: 195 HLLLGIWSE-ESAGRKILATLGFD 215
           HLLLG+  E E    ++L  LG D
Sbjct: 200 HLLLGLLREGEGVAARVLENLGAD 220

[Close]

BLAST of Cucsat.G1350 vs. NCBI nr
Match: XP_004148125.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Cucumis sativus] >KGN57294.1 hypothetical protein Csa_009466 [Cucumis sativus])

HSP 1 Score: 460 bits (1184), Expect = 2.88e-163
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR
Sbjct: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. NCBI nr
Match: KAA0033572.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] >TYK30329.1 ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa])

HSP 1 Score: 429 bits (1103), Expect = 6.42e-151
Identity = 220/234 (94.02%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLSFS LPLSLPSQSNC+SLEHKP LFPL+PLI+LKLAIKRSNATHPV KF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPASKPEGV PEKLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTSTAAKFLRANGITLFKVREETVKLLGK+DMYF SPEHPPLTEPAQ+ALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. NCBI nr
Match: XP_008439115.1 (PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 426 bits (1095), Expect = 1.06e-149
Identity = 219/234 (93.59%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLSFS LPLSLPSQSNC+SLEHKP LFPL+PLI+LKLAIKRSNATHPV KF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPASKPEGV PEKLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTSTAAKFLRANGITLFKVREETVKLLGK+DMYF S EHPPLTEPAQ+ALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSSEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. NCBI nr
Match: XP_038877997.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 397 bits (1021), Expect = 1.94e-138
Identity = 204/232 (87.93%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 3   ATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSRRA 62
           A   NSLS S LP SLP+QSNC+S EHK    P SPLI+LKLAIKRSN THP  KFSRRA
Sbjct: 2   AASMNSLSLSQLPFSLPAQSNCYSSEHKALFLPPSPLIELKLAIKRSNPTHPASKFSRRA 61

Query: 63  TTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIE 122
           TTATVSFSLPASKPEGV PEK+PKWSARAIKSF M ELEARKLKYPNTGTEALLMGILIE
Sbjct: 62  TTATVSFSLPASKPEGVSPEKIPKWSARAIKSFTMAELEARKLKYPNTGTEALLMGILIE 121

Query: 123 GTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKS 182
           GTS AAKFLRANGITLFKVREETVKLLGK+DMYF SPEHPPLTEPAQ+ALDWAVA+KLKS
Sbjct: 122 GTSNAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAKKLKS 181

Query: 183 GQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           GQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEI KTVDKDATFSYK
Sbjct: 182 GQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTVDKDATFSYK 233

[Close]

BLAST of Cucsat.G1350 vs. NCBI nr
Match: XP_022141304.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 397 bits (1020), Expect = 2.86e-138
Identity = 202/234 (86.32%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLS S +P SL +QSNC++LEHK    P+SPL +LKLAIKRSN TH V KF+R
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA+KPEGV P+KLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGK+DMYF SPEHPPLTEPAQ+ALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSG+SGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEI K+VDKDATFSYK
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. ExPASy TrEMBL
Match: A0A0A0L8F6 (Clp R domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G177380 PE=4 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 1.39e-163
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR
Sbjct: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. ExPASy TrEMBL
Match: A0A5D3E3F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00010 PE=4 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 3.11e-151
Identity = 220/234 (94.02%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLSFS LPLSLPSQSNC+SLEHKP LFPL+PLI+LKLAIKRSNATHPV KF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPASKPEGV PEKLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTSTAAKFLRANGITLFKVREETVKLLGK+DMYF SPEHPPLTEPAQ+ALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. ExPASy TrEMBL
Match: A0A1S3AY13 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484006 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 5.15e-150
Identity = 219/234 (93.59%), Postives = 225/234 (96.15%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLSFS LPLSLPSQSNC+SLEHKP LFPL+PLI+LKLAIKRSNATHPV KF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPASKPEGV PEKLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTSTAAKFLRANGITLFKVREETVKLLGK+DMYF S EHPPLTEPAQ+ALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSSEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. ExPASy TrEMBL
Match: A0A6J1CI79 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111011733 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 1.38e-138
Identity = 202/234 (86.32%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLS S +P SL +QSNC++LEHK    P+SPL +LKLAIKRSN TH V KF+R
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA+KPEGV P+KLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGK+DMYF SPEHPPLTEPAQ+ALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSG+SGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEI K+VDKDATFSYK
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSVDKDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. ExPASy TrEMBL
Match: A0A6J1E4F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430678 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 2.67e-136
Identity = 203/234 (86.75%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 1   MAATRFNSLSFSPLPLSLPSQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSR 60
           MAATR NSLS S +P SLP+QSNC+SLE K    P+SPLIQL LAIKRSNATH V KF+R
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPASKPEGV P+KLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKL 180
           IEGT+ AA+FLRANGITLFKVREETVKLLGK+DMYF SPEHPPLTE AQ+ALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234
           KSGQSGEITTGHLLL IWSEESAGRKILATLGFD EKAKEI KTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDGEKAKEIEKTVDNDATFSYK 234

[Close]

BLAST of Cucsat.G1350 vs. TAIR 10
Match: AT4G25370.1 (Double Clp-N motif protein )

HSP 1 Score: 239.2 bits (609), Expect = 3.4e-63
Identity = 132/233 (56.65%), Postives = 171/233 (73.39%), Query Frame = 0


Query: 8   SLSFSPLPLSLP-----SQSNCHSLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSRRA 67
           ++SF PL LS P      Q+   S   + PL   S L+  KL   + +    V K  R  
Sbjct: 5   TVSFIPLTLSNPRIFVSRQNGSPSSSSRIPL--TSSLLGKKLLATQPSHRCFVPKL-RCL 64

Query: 68  TTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIE 127
           T+A+   ++P ++PE    +K+PKWSARAIKS AMGELEARKLKYP+TGTEA+LMGIL+E
Sbjct: 65  TSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVE 124

Query: 128 GTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKS 187
           GTST AKFLR NG+TLFKVR+ET+ LLGK+DMYF SPEHPPLTEPAQKA+ WA+ EK KS
Sbjct: 125 GTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKS 184

Query: 188 GQSGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 235
              GE+TT +LLLG+WS+ +SAGR+IL  LGF+++KAKE+ K++++D   S+K
Sbjct: 185 DVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234

[Close]

BLAST of Cucsat.G1350 vs. TAIR 10
Match: AT4G12060.1 (Double Clp-N motif protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-56
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 0


Query: 60  RRATTATVSFSLPASKPEGVPPE-KLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 119
           RR   + +S SLP + P+ V  + K PKWS RAIKSFAMGELEARKLKYPNTGTEALLMG
Sbjct: 67  RRIHKSAIS-SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMG 126

Query: 120 ILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAE 179
           ILIEGTS  +KFLRAN I L+KVREETVKLLGKADMYF SPEHPPLTE AQ+ALD A+ +
Sbjct: 127 ILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQ 186

Query: 180 KLKSGQSGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEI 222
            LK+G  GE+   H+LLGIWSE ES G KILATLGF DEK+KE+
Sbjct: 187 NLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKEL 229

[Close]

BLAST of Cucsat.G1350 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 79  VPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITL 138
           VP     +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAK L++ GI L
Sbjct: 110 VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 169

Query: 139 FKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIW 198
              R E  K++G+   +       P T  A++ L+ ++ E  + G +  I + HLLLG+ 
Sbjct: 170 KDSRVEVEKIIGRGSGFVA--VEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLL 229

Query: 199 SE-ESAGRKILATLGFD 215
            E E    ++L  LG D
Sbjct: 230 REGEGVAARVLENLGAD 243

[Close]

BLAST of Cucsat.G1350 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 79  VPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITL 138
           VP     +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAK L++ GI L
Sbjct: 79  VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 138

Query: 139 FKVREETVKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIW 198
              R E  K++G+   +       P T  A++ L+ ++ E  + G +  I + HLLLG+ 
Sbjct: 139 KDSRVEVEKIIGRGSGFVA--VEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLL 198

Query: 199 SE-ESAGRKILATLGFD 215
            E E    ++L  LG D
Sbjct: 199 REGEGVAARVLENLGAD 212

[Close]

BLAST of Cucsat.G1350 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-12
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 86  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITLFKVREET 145
           +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAK L++ GI L   R E 
Sbjct: 97  RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156

Query: 146 VKLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAG 205
            K++G+   +       P T  A++ L+ ++ E  + G +  I + HLLLG+  E E   
Sbjct: 157 EKIIGRGSGFVA--VEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 216

Query: 206 RKILATLGFD 215
            ++L  LG D
Sbjct: 217 ARVLENLGAD 223

The following BLAST results are available for this feature:

BLAST of Cucsat.G1350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WL3	4.7e-62	56.65	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidops...	[more]
Q8GW78	1.9e-55	71.95	ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidops...	[more]
P31541	3.4e-12	30.64	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ...	[more]
Q9TM05	7.6e-12	35.56	ATP-dependent Clp protease ATP-binding subunit ClpA homolog OS=Cyanidium caldari...	[more]
P31542	1.3e-11	33.33	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]

BLAST of Cucsat.G1350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148125.1	2.88e-163	100.00	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Cucumis sat...	[more]
KAA0033572.1	6.42e-151	94.02	ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] ...	[more]
XP_008439115.1	1.06e-149	93.59	PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-l...	[more]
XP_038877997.1	1.94e-138	87.93	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Beninc...	[more]
XP_022141304.1	2.86e-138	86.32	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momord...	[more]

BLAST of Cucsat.G1350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8F6	1.39e-163	100.00	Clp R domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G177380 PE=4 ...	[more]
A0A5D3E3F8	3.11e-151	94.02	ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3AY13	5.15e-150	93.59	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A6J1CI79	1.38e-138	86.32	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momo...	[more]
A0A6J1E4F8	2.67e-136	86.75	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]

BLAST of Cucsat.G1350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25370.1	3.4e-63	56.65	Double Clp-N motif protein	[more]
AT4G12060.1	1.4e-56	71.95	Double Clp-N motif protein	[more]
AT3G48870.1	1.6e-12	33.58	Clp ATPase	[more]
AT3G48870.2	1.6e-12	33.58	Clp ATPase	[more]
AT5G50920.1	3.5e-12	33.85	CLPC homologue 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004176	Clp, repeat (R) domain	PFAM	PF02861	Clp_N	coord: 101..150 e-value: 3.3E-9 score: 36.7 coord: 185..221 e-value: 8.7E-7 score: 29.0
IPR004176	Clp, repeat (R) domain	PROSITE	PS51903	CLP_R	coord: 84..228 score: 27.592918
IPR036628	Clp, N-terminal domain superfamily	GENE3D	1.10.1780.10		coord: 86..230 e-value: 1.5E-41 score: 143.8
IPR036628	Clp, N-terminal domain superfamily	SUPERFAMILY	81923	Double Clp-N motif	coord: 86..219
IPR044217	ATP-dependent Clp protease ATP-binding subunit CLPT1/2	PANTHER	PTHR47016	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 9..228
None	No IPR available	PANTHER	PTHR47016:SF1	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 9..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1350.T1	Cucsat.G1350.T1	mRNA
Cucsat.G1350.T5	Cucsat.G1350.T5	mRNA
Cucsat.G1350.T3	Cucsat.G1350.T3	mRNA
Cucsat.G1350.T4	Cucsat.G1350.T4	mRNA
Cucsat.G1350.T2	Cucsat.G1350.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009532	plastid stroma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008233	peptidase activity