Cucsat.G13468 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13468
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ethylene-responsive transcription factor SHINE 2-like
Location	ctg1838: 7239120 .. 7241064 (+)
RNA-Seq Expression	Cucsat.G13468
Synteny	Cucsat.G13468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATAATGAGTAATTGGCGAAACAGGATGTTATTCAATTCAAACACTCCATCTTCCTCACTACAATCATAAATGGCGATTTATGATCTAAACCTCCAAATTTCTTCTTCCCTTTTTCCACATTCACACAATTCTCTCATTTCTATAATTTAATCAATTTTTTTACTTTTTGGGTAGCGCCCAAATTTGAAGTTCCATTCCATTTCAATCCGCCATTACACGGAGAAGAAGAAGAAATTAAATAGTTGCAGAATGGGAGAGAGAAATTGTAATTTGGAGGACTCTCATTTAATTTTGGTTGTTAAGAAGCTGTGTCTTTGTGTTGATCTTTCATGGTTGAGCAGGTGAAAGTTTTTAATGGCCAACCCCATTAAAAAAGTACTCTTCTTCCTCTTCTTCTTCTCCTCCTCCTTATTTTTCTTATTCTTCAGTGACTTTCCAATTTCCCACCGACAATTCTATATAAATGGTTGAAATTATTACTCTTTGTACGTTTTCCTACTCTCTCACCTGTTTTTTCTTTTTCCTATCTCTCTCTCTCTCTCTCTTGTTGAAGGCTCTGAATCTCTCTCTAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGTAAAATTCCCTCTTTTATTATCTTGTTTGTTCTTATGCTATAAATATAAGTGCCACTGGTTGCAAATTGCTCTGTTACTCTCATTTTCTGTCTCCTGCCCATAACGTGTTTGTTGATTTGCTTGGAATAAACTTTGGCGTCTGTGGCGGCGGATATTTTTGCAGATTTGTACAACCCAATTGTTGTATGTATGTGGGTTATTTGGCTTGTGTTTGTTGGTTCAAACATGCTTTGAAACCCCATATCTTTTTTTGGTTGTCCGTAATTTGTTTGATGATTTGCCTGAAAGGAGTTGTAGATTTGTATTTCTCTGCTGTAAATGTATGCATTGCTTGTGTTTGTTGGTTCAAATGAAGTTATGAAAAAGTGAATTTTCCCGTTTTCTTTCTTATGCCTTCAACGAAGTTTGATGGCCATTAGGCATGCTTAATTGTTTCTGCTCTACATTGCACATTGAGCCTATATTCTTATATTGTTCATGTGATTATTTCTTTGTAGGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCGGAGGATGCAGCACGAGCGTACGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAAGTACAGGATCTCAACACAAAACTCTACTCCCAAAATTTAAAAATAAAAAAATAACACCCATTAGATTAAAACAAAGAGGCTTAATTAATCTGTGTTTGACTGTCTATGTGTGTATGTATATATTCATATATGTTTTTATTCCTATTTTTCTGTTACTTTCAGCTTATATATAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAGAGACGGAGCTTTTGCATATACATAAGTTTGCTGTTTTATGTCATCTTTTGTAATTCACATATATATATTTGGAAAAGGTATATATAATATAAAGGGAAAAGTTTGAAGATGATGATGAGACT

Coding sequence (CDS)

ATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCGGAGGATGCAGCACGAGCGTACGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAA

Protein sequence

MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS

Homology

[Close]

BLAST of Cucsat.G13468 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHG--------SSPMSPKALSELLSTKLRKCCKNPSPS 60
           M+G+NAKTNFP + +++ E S G          SS  S  +LS +LS KLRKCCK+PSPS
Sbjct: 53  MSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPS 112

Query: 61  LTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGD---- 120
           LTCLRLD  ++HIGVWQKRAG+++ S+WVM +ELG      P S+SQE       D    
Sbjct: 113 LTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELG------PASSSQETTSKASQDAILA 172

Query: 121 -------GDDHQNEIDEEDRIAMQMIEELLNWN 135
                  G   +  +DEE+++A+QMIEELLN N
Sbjct: 173 PTTEVEIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Cucsat.G13468 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 74/139 (53.24%), Postives = 94/139 (67.63%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEAS---HGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLR 60
           MNGQNAKTNFP  K  SEE S       S  MSPK+LSELL+ KLRK CK+ +PSLTCLR
Sbjct: 53  MNGQNAKTNFPVVK--SEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLR 112

Query: 61  LDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNE-- 120
           LD D++HIGVWQKRAG++ +  WVMR+ELG     S            + + ++ + E  
Sbjct: 113 LDTDSSHIGVWQKRAGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAI 172

Query: 121 IDEEDRIAMQMIEELLNWN 135
           I +ED++AM+MIEELLNW+
Sbjct: 173 ISDEDQLAMEMIEELLNWS 189

[Close]

BLAST of Cucsat.G13468 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 73/137 (53.28%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQ+AKTNFP  K +    S    S+  SPK+LSELL+ KLRK CK+ +P LTCLRLD 
Sbjct: 53  MNGQSAKTNFPVIKSNGSN-SLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDN 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNE-IDEE 120
           D++HIGVWQKRAG++ + NWV  +ELG K    P        GD + +    +NE + E+
Sbjct: 113 DSSHIGVWQKRAGSKTSPNWVKLVELGDKVNARP-------GGDIETNKMKVRNEDVQED 172

Query: 121 DRIAMQMIEELLNWNCP 137
           D++AMQMIEELLNW CP
Sbjct: 173 DQMAMQMIEELLNWTCP 181

[Close]

BLAST of Cucsat.G13468 vs. NCBI nr
Match: XP_004136348.1 (ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >XP_011652482.1 ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >KGN60101.1 hypothetical protein Csa_000793 [Cucumis sativus])

HSP 1 Score: 286 bits (732), Expect = 1.30e-96
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC
Sbjct: 53  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEED 120
           DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEED
Sbjct: 113 DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEED 172

Query: 121 RIAMQMIEELLNWNCPLPSTSS 142
           RIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 RIAMQMIEELLNWNCPLPSTSS 194

[Close]

BLAST of Cucsat.G13468 vs. NCBI nr
Match: KAA0038810.1 (ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 255 bits (652), Expect = 1.70e-84
Identity = 133/143 (93.01%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 53  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-QEADGDGDGDGDDHQNEIDEE 120
           D AHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS QEAD      GDDHQNEIDEE
Sbjct: 113 DTAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSCQEAD------GDDHQNEIDEE 172

Query: 121 DRIAMQMIEELLNWNCPLPSTSS 142
           DRIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 DRIAMQMIEELLNWNCPLPSTSS 189

[Close]

BLAST of Cucsat.G13468 vs. NCBI nr
Match: XP_008466408.1 (PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] >XP_008466410.1 PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] >TYK31433.1 ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 252 bits (644), Expect = 2.81e-83
Identity = 132/143 (92.31%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 53  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-QEADGDGDGDGDDHQNEIDEE 120
           D AHIGVWQKRAGTRATSNWVMRIELGKKEVPS ESTS QEAD      GDDHQNEIDEE
Sbjct: 113 DTAHIGVWQKRAGTRATSNWVMRIELGKKEVPSSESTSCQEAD------GDDHQNEIDEE 172

Query: 121 DRIAMQMIEELLNWNCPLPSTSS 142
           DRIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 DRIAMQMIEELLNWNCPLPSTSS 189

[Close]

BLAST of Cucsat.G13468 vs. NCBI nr
Match: XP_038899932.1 (ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida] >XP_038899933.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida] >XP_038899934.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida])

HSP 1 Score: 248 bits (633), Expect = 1.38e-81
Identity = 129/144 (89.58%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 53  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ESTSQEADGDGDGDGDDHQNEI 120
           DNAHIGVWQKRAGTRATSNWVMRIELGKK+VPSP    ESTSQEADGDG      H+N I
Sbjct: 113 DNAHIGVWQKRAGTRATSNWVMRIELGKKDVPSPSPSPESTSQEADGDG------HRNGI 172

Query: 121 DEEDRIAMQMIEELLNWNCPLPST 140
           DEEDRIAMQMIEELLNWNCPLPST
Sbjct: 173 DEEDRIAMQMIEELLNWNCPLPST 190

[Close]

BLAST of Cucsat.G13468 vs. NCBI nr
Match: XP_038899931.1 (ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 248 bits (633), Expect = 2.28e-81
Identity = 129/144 (89.58%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 68  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 127

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ESTSQEADGDGDGDGDDHQNEI 120
           DNAHIGVWQKRAGTRATSNWVMRIELGKK+VPSP    ESTSQEADGDG      H+N I
Sbjct: 128 DNAHIGVWQKRAGTRATSNWVMRIELGKKDVPSPSPSPESTSQEADGDG------HRNGI 187

Query: 121 DEEDRIAMQMIEELLNWNCPLPST 140
           DEEDRIAMQMIEELLNWNCPLPST
Sbjct: 188 DEEDRIAMQMIEELLNWNCPLPST 205

[Close]

BLAST of Cucsat.G13468 vs. ExPASy TrEMBL
Match: A0A0A0LJA8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878210 PE=4 SV=1)

HSP 1 Score: 286 bits (732), Expect = 6.31e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC
Sbjct: 53  MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEED 120
           DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEED
Sbjct: 113 DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEED 172

Query: 121 RIAMQMIEELLNWNCPLPSTSS 142
           RIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 RIAMQMIEELLNWNCPLPSTSS 194

[Close]

BLAST of Cucsat.G13468 vs. ExPASy TrEMBL
Match: A0A5A7T6E0 (Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003670 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 8.24e-85
Identity = 133/143 (93.01%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 53  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-QEADGDGDGDGDDHQNEIDEE 120
           D AHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS QEAD      GDDHQNEIDEE
Sbjct: 113 DTAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSCQEAD------GDDHQNEIDEE 172

Query: 121 DRIAMQMIEELLNWNCPLPSTSS 142
           DRIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 DRIAMQMIEELLNWNCPLPSTSS 189

[Close]

BLAST of Cucsat.G13468 vs. ExPASy TrEMBL
Match: A0A1S3CR71 (ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo OX=3656 GN=LOC103503822 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 1.36e-83
Identity = 132/143 (92.31%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 53  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-QEADGDGDGDGDDHQNEIDEE 120
           D AHIGVWQKRAGTRATSNWVMRIELGKKEVPS ESTS QEAD      GDDHQNEIDEE
Sbjct: 113 DTAHIGVWQKRAGTRATSNWVMRIELGKKEVPSSESTSCQEAD------GDDHQNEIDEE 172

Query: 121 DRIAMQMIEELLNWNCPLPSTSS 142
           DRIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 DRIAMQMIEELLNWNCPLPSTSS 189

[Close]

BLAST of Cucsat.G13468 vs. ExPASy TrEMBL
Match: A0A5D3E5T0 (Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007440 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 1.36e-83
Identity = 132/143 (92.31%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD SEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 53  MNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDS 112

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTS-QEADGDGDGDGDDHQNEIDEE 120
           D AHIGVWQKRAGTRATSNWVMRIELGKKEVPS ESTS QEAD      GDDHQNEIDEE
Sbjct: 113 DTAHIGVWQKRAGTRATSNWVMRIELGKKEVPSSESTSCQEAD------GDDHQNEIDEE 172

Query: 121 DRIAMQMIEELLNWNCPLPSTSS 142
           DRIAMQMIEELLNWNCPLPSTSS
Sbjct: 173 DRIAMQMIEELLNWNCPLPSTSS 189

[Close]

BLAST of Cucsat.G13468 vs. ExPASy TrEMBL
Match: A0A6J1FE08 (ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 4.88e-79
Identity = 125/146 (85.62%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDC 60
           MNGQNAKTNFPASKD S EASHGHGSSPM+PKALSELLSTKLRKCCKNPSPSLTCLRLD 
Sbjct: 30  MNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRLDS 89

Query: 61  DNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSP----ESTSQEADGDGDGDGDDHQNEI 120
           DNAHIGVWQKRAGTRATSNWVMRIELGKKE+PSP    ESTSQE DG        H+N I
Sbjct: 90  DNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDG--------HRNGI 149

Query: 121 DEEDRIAMQMIEELLNWNCPLPSTSS 142
           DEEDRIAMQMIEELLNWNCPLPS SS
Sbjct: 150 DEEDRIAMQMIEELLNWNCPLPSISS 167

The following BLAST results are available for this feature:

BLAST of Cucsat.G13468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	2.7e-28	48.37	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	1.0e-27	53.24	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	1.0e-27	53.28	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Cucsat.G13468 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136348.1	1.30e-96	100.00	ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >XP_011652482...	[more]
KAA0038810.1	1.70e-84	93.01	ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa]	[more]
XP_008466408.1	2.81e-83	92.31	PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] ...	[more]
XP_038899932.1	1.38e-81	89.58	ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hisp...	[more]
XP_038899931.1	2.28e-81	89.58	ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hisp...	[more]

BLAST of Cucsat.G13468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA8	6.31e-97	100.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878210 PE=...	[more]
A0A5A7T6E0	8.24e-85	93.01	Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CR71	1.36e-83	92.31	ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3E5T0	1.36e-83	92.31	Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuw...	[more]
A0A6J1FE08	4.88e-79	85.62	ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschat...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..115
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..140
None	No IPR available	PANTHER	PTHR31194:SF13	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13468.T2	Cucsat.G13468.T2	mRNA
Cucsat.G13468.T1	Cucsat.G13468.T1	mRNA
Cucsat.G13468.T6	Cucsat.G13468.T6	mRNA
Cucsat.G13468.T4	Cucsat.G13468.T4	mRNA
Cucsat.G13468.T3	Cucsat.G13468.T3	mRNA
Cucsat.G13468.T7	Cucsat.G13468.T7	mRNA
Cucsat.G13468.T8	Cucsat.G13468.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity