Cucsat.G13197 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGTCCATATAAATATTATGAAAAGAGTGTATATTTGAATAATTAGAAAAGATGATGGTCAGAAAAATAGAACATAAAATCTAACGGACCAAAGAGCACATTATGGGCACAATTCTGGCCTTCTTCTTGTTTTCAAGTTCTAGGTGAGCACAATACATGTACGATTTCATCGATGAGGTATGCAATTTTATTTGAATCCCCAATTTTTCTTTCAAAACCTACTTTTTCCAGAATCCCATTTGGTCCCTTCAATCATTTCTGTCAAAAAAGATGGAGAAAGCCAATAGTGAACGCTCAAACTCGGTTAGAAGACAGAACAAGGGACCTCAAGCTCGACAAACTCGCAACCCAGCTCAAAAAATTTAGGGTCATCCTCAAACTCTACGAGCTCATGAACAATCGGAAACGCGGCCCTTTCGTCTCCTTACAAATCATGTCTCGTTGGAGAAACATTGTTGGTGTCAGAATCGGAATTGGGGAGTTTCTTCATAAGTACCCCCATTTGTTCGACTTATTTCCTCATCCGGTAAGGAGGAATTTATGCTGTAGAATCACTGGAAAGATGACTGCCTTGATGAAACAAGAGGAGAATGTTATTAACGATATGGAAATCGAGACTGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGTGAATGGGACTCTCCATGTTCATGCTTTGAGACTAATCAGCAGGGAATTGGGGTTGCCTGATGGGTTTAGAGAATCGATTCTTGAGAAGTATTCTGATGATTTTAGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATAAGAATGGAGCTATTGCTGAGGTTGAAAAATGGAGGGAGAGAGAGTTTAGAGAGAAATGGCTGAGCGAATTCGATGTCAAATATGCATTTCCTATCAATTTCCCAACTGGGTTTATAATAGAAGGTGGTTTTAGAGAGAAACTGAGGAATTGGCAGAGGCTTCCATATACACAGCCATATGAGAAGAGACAAGGCTTTGGTCATCGTTCTTCTGGGGGGGTTCAGCGCCATGAGAAGCGAGCTGTGGCTGTACTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGACGTGGAGCGACTTGTCCATTTTAGGCGTGATTTCGCCATTGAAGTCAATATCCGCGAGCTTCTACTGAAGCACCCAGGAATATTCTACATATCAACCAAGGGGACCACCCAAATTGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTAGAGCCTAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTGTTTTGTTGGGTCGCCGACACACGAAGCAGTTGGAATCATCCATGGAAATCAAGGAGAATGACAATGCAACCGAAAATGGAGACTGGCTATCTAAAAGTGAAGGAAGTTGGGTCTTGCCAATACTACAGGGCTTCGATTGAGGGATGTGGTTCAAATATATCGTAAAATTGATGGTTTGTGCATTGTTTAAGGGTGAGTGAAGAAGGAACTGTGTTCATGGTAGAAGCAAATTGTTTGTCTGATGATGTTTGAATGAATCCACCCACTCAAGGGGAACAAAGAAACCAGCCTTTAAGGTTATTTCTTTAAACTTCCATTATTCTTTTTTTAAAAAAAAAAAAAATCTATTTGAGGCTCTTGAAAATTTGAAAATATAAGCAATTTCAAAACTATGTGCTGTAATTGACTGAAAGCTCATTTCACCATTTCAAGAATCACACTAACTCACTTCGAATCATTACTTTGTTTGGTGATAAAGAAAATACTTTTTCCTTTGTTGTCATATTTTTATCTAGCTTCCTTCATACTTCGTTTGATTATGTAAATTAAGTAGAATGGCATGAGGTTATGAAAATTTGAAACTCTTCTTTTCTCGAGTGAATGGTATAAAAGGACTCCAATACTTATACTGCATCCGTTGCTGTCTGCATTGACTTTATTTTTACAATTGAAGCTTCCAGCATATTGTTTATTGTTGCGTTGAACAATTGTATTCACTTTATATGGAACCCCTTGATATAAAATGAATCCTCGAAATGAAGATGCGTTCTATTTCTTTATTCATTGACTGTTGCTGGTTTGATTGTTCTAATGTTTGAGTTTTCATTGCTGAACCGATTTAAATATGCTCTGTTCTTGTTCTTTTGGCTTAACTAGTTATGGCCAGAACTTCAGACATGTTACTCACGTAGCCTTTGTTTCATATTTCTTGATACCTTAATTTGCTTGTGCTACTATTTGGGAGCACTTTGCTAAAGTATTTTTTTTTTTTAAATGGTTAAAAGCACCCTTTTTTTAAGAAAAAAGCATTCTTAAAACATTCTCAAATGGGGACCCTTTTAAGGTTTTCGTGATGGAGAATGGTTGTGTCTTTTGTCCATGTTAGTTTTATCTCTACTAACATAAATGGTAAAACCAACAGACAACACTGAAGTTCTTGCTGCTGCTTAAGAGCCGGGCTTTAACAACTATTCTTGTAGGACTCGAGCTTGTATGAAGCAGCATACCCATGGACAAAGCTGGCTGATCTAAAAAGCATATGGAGGTAACCACTCTTCAAAACTGACACTGGTTTCAAAAATAAAGCAATCGGGAGACCACAAATTCGAGACCCTTTTTTTCCTTTTCTTTCTCTGGATTTGAAACCAAGCACCCATTAGGAAAAATAAAAGAATATACAAGAACCTACAAAAAAAGGACTCCAATCCAAAAAAAATCTATTAACCTGTCCATGAAGACACATTAAACCTCACAGCCACCCAGACCTCCCCAAAAGACTTCTCCATCCCTCTAAAACTTTTACTGTTCCTCTCAAGTCACACTCTAAAAGATAGCACATTGACAAGTCTACCAAAAAACCTCTTCCTTTTATCTTGATAGGAGGACAATGAATTCGACCCTTTTTATTTCACCTTTATTTGAATGGTAGCAAGTCATCTCTGGATTACGAGCTGGAGTGAAGTTTGGATGCAGAAAGCCATGTCAATGAAAATGAAGTTTGGATGCAGAAAGCCTATTGAGGAATGCAGGTGGACAAAAAGTCTTTTGACACTCCAAGAAATTTGGTTATTTTGTTTGAGACAAACGTGGGCAACTGAATAGAAACAACCAGAAGGAATAGTGTTGTATGATGAAATGATGAACTTGTTGAAAAAAGGACTACAAGTTTCTTGAGCCTGCTTCCCTCAATCAAACCATCACATTGTCTTCAATTCAAGGGATTTACTATGAGGATCAAAGGAAAAGGACATGCTTCTGTTTTCTTCACTTGCATTATGTTTGATGCTCTTCAGATTATAATAAAGAAGAGGTATGTGCTGTTCAACTTTAACTGTATAAGTTTCTTTCTATGCTATGGCTTAATGGTGAAGGGAGCTTTTTAGTTATATCTGGTATGTTTGGAAATATTGATACAAGAATCTCGTCTTCTTAAATTTGGTGATTTTCTATCCTATTCTGATCTCTCCCATATGGCTGAAAATCAAATCTTTTGTCCTATTTATGGTTAGTTGGGAGCTTGATATATGTGGCTTTAGAGGAATAGATGCAGATATGAGACACGAATACAACATGAACACAATGACCCATCATTTTTTATAAAACCTAGGACACGAAAAAGACACATTTATTAAACCCTAAATTTTCAAA ATGAGGTATGCAATTTTATTTGAATCCCCAATTTTTCTTTCAAAACCTACTTTTTCCAGAATCCCATTTGGTCCCTTCAATCATTTCTGTCAAAAAAGATGGAGAAAGCCAATAGTGAACGCTCAAACTCGGTTAGAAGACAGAACAAGGGACCTCAAGCTCGACAAACTCGCAACCCAGCTCAAAAAATTTAGGGTCATCCTCAAACTCTACGAGCTCATGAACAATCGGAAACGCGGCCCTTTCGTCTCCTTACAAATCATGTCTCGTTGGAGAAACATTGTTGGTGTCAGAATCGGAATTGGGGAGTTTCTTCATAAGTACCCCCATTTGTTCGACTTATTTCCTCATCCGGTAAGGAGGAATTTATGCTGTAGAATCACTGGAAAGATGACTGCCTTGATGAAACAAGAGGAGAATGTTATTAACGATATGGAAATCGAGACTGTACAGCGATTGAAGAAGTTGCTAATGATGTCTGTGAATGGGACTCTCCATGTTCATGCTTTGAGACTAATCAGCAGGGAATTGGGGTTGCCTGATGGGTTTAGAGAATCGATTCTTGAGAAGTATTCTGATGATTTTAGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATAAGAATGGAGCTATTGCTGAGGTTGAAAAATGGAGGGAGAGAGAGTTTAGAGAGAAATGGCTGAGCGAATTCGATGTCAAATATGCATTTCCTATCAATTTCCCAACTGGGTTTATAATAGAAGGTGGTTTTAGAGAGAAACTGAGGAATTGGCAGAGGCTTCCATATACACAGCCATATGAGAAGAGACAAGGCTTTGGTCATCGTTCTTCTGGGGGGGTTCAGCGCCATGAGAAGCGAGCTGTGGCTGTACTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGACGTGGAGCGACTTGTCCATTTTAGGCGTGATTTCGCCATTGAAGTCAATATCCGCGAGCTTCTACTGAAGCACCCAGGAATATTCTACATATCAACCAAGGGGACCACCCAAATTGTTTTCCTTAGAGAGGCTTATGCTAAAGGGTGCTTGGTAGAGCCTAATCCAATATACATTGTTAGAAGGAAGATGCAGGACCTTGTTTTGTTGGGTCGCCGACACACGAAGCAGTTGGAATCATCCATGGAAATCAAGGAGAATGACAATGCAACCGAAAATGGAGACTGGCTATCTAAAAGTGAAGGAAGTTGGGTCTTGCCAATACTACAGGGCTTCGATTGA MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD Homology
BLAST of Cucsat.G13197 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25 Identity = 65/171 (38.01%), Postives = 99/171 (57.89%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy Swiss-Prot
Match: Q7SCY7 (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sym-1 PE=3 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-24 Identity = 62/169 (36.69%), Postives = 98/169 (57.99%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-24 Identity = 59/171 (34.50%), Postives = 98/171 (57.31%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 63/169 (37.28%), Postives = 97/169 (57.40%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 61/169 (36.09%), Postives = 99/169 (58.58%), Query Frame = 0
BLAST of Cucsat.G13197 vs. NCBI nr
Match: XP_011652163.1 (protein sym-1 [Cucumis sativus] >KGN59408.1 hypothetical protein Csa_001167 [Cucumis sativus]) HSP 1 Score: 590 bits (1520), Expect = 2.24e-212 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of Cucsat.G13197 vs. NCBI nr
Match: XP_008443214.1 (PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [Cucumis melo] >KAA0053913.1 protein SYM1 [Cucumis melo var. makuwa] >TYK25492.1 protein SYM1 [Cucumis melo var. makuwa]) HSP 1 Score: 560 bits (1442), Expect = 1.74e-200 Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0
BLAST of Cucsat.G13197 vs. NCBI nr
Match: XP_038903823.1 (protein sym-1 [Benincasa hispida]) HSP 1 Score: 545 bits (1404), Expect = 1.16e-194 Identity = 274/297 (92.26%), Postives = 282/297 (94.95%), Query Frame = 0
BLAST of Cucsat.G13197 vs. NCBI nr
Match: XP_022934093.1 (protein sym-1-like [Cucurbita moschata] >KAG6580864.1 hypothetical protein SDJN03_20866, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 499 bits (1286), Expect = 1.03e-176 Identity = 253/297 (85.19%), Postives = 268/297 (90.24%), Query Frame = 0
BLAST of Cucsat.G13197 vs. NCBI nr
Match: XP_022983841.1 (protein sym-1 [Cucurbita maxima]) HSP 1 Score: 491 bits (1263), Expect = 3.27e-173 Identity = 248/297 (83.50%), Postives = 265/297 (89.23%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy TrEMBL
Match: A0A0A0LC77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1) HSP 1 Score: 590 bits (1520), Expect = 1.08e-212 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy TrEMBL
Match: A0A1S3B718 (protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1) HSP 1 Score: 560 bits (1442), Expect = 8.42e-201 Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy TrEMBL
Match: A0A5D3DPM1 (Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 PE=3 SV=1) HSP 1 Score: 560 bits (1442), Expect = 8.42e-201 Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy TrEMBL
Match: A0A6J1F6P4 (protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441368 PE=3 SV=1) HSP 1 Score: 499 bits (1286), Expect = 4.97e-177 Identity = 253/297 (85.19%), Postives = 268/297 (90.24%), Query Frame = 0
BLAST of Cucsat.G13197 vs. ExPASy TrEMBL
Match: A0A6J1J3I0 (protein sym-1 OS=Cucurbita maxima OX=3661 GN=LOC111482336 PE=3 SV=1) HSP 1 Score: 491 bits (1263), Expect = 1.58e-173 Identity = 248/297 (83.50%), Postives = 265/297 (89.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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