Cucsat.G12744 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12744
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein transport protein SEC13 homolog B
Location	ctg1838: 3463754 .. 3465920 (-)
RNA-Seq Expression	Cucsat.G12744
Synteny	Cucsat.G12744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGTAACAAAGGTATAAAACACCATTCCTCATTCAACGTATTTGTGCCTTGTGGGGACGAAAAAGAAAAAAGCGTCAAATTAAGTTACTGGTCGGTCAATTTTTCTTGCGGGTTTCAGTATATCTTCGGATATTTGTATGCAAACCCAGCCGCTAATAAGCAACCAAAACACTCCACGAGGAAAACGGAGCTCAACAGGCAGATCGGCGGGCGAACTCTTGTTCTGCACCGGCGATTTGCTTCTTTGCAGCTTTACAACCCGTCCTATCATCTCAAAGGTAATTCAAATCCCCTCTTCCACTTGCTGCTGAATTTTGCTCTAATCTGTTTGATTTTTCGTCGATAGCCAAATTCCAGATCTACTTCTGTTTTGATATCCGCAGTGTTTAAAGCCTTTTAGTTTATTCGTTTCGTTTACCCTTTTGCTCAAATTGAGGTGGGTCTGTCTTTATTCGTGTCAATAAATCTCGATCTAGTAGTGAATTTGTGTTTTGAGTGAGCGCGTAGAGTTTATGTTATTGTTTGCCTGTAGATATTGAGAGGAGCGTTTATTTTGCAACTGAGTGCAGGATAATTCATTTTTAGCGTTTGATTGGAAGTATTATGCTTCATATGCGTTGTTGTTTTGTTAGATCTGCAATGGGTACCTTTAACCACCGAAGTTGTAAATGAAGAATGTGAAAAGAATCAACCTTTTAATTGTTGTCGTCTATAGTTGTGAAATATTGATTATATTGGCTTTCCTTTTATAACTATGGAATTTTCCTTTTAATTAATTTTGTGAAGTTGCATAGACTTTGCATAGTGTTTTGATATAGATTATTTTCTATCAGAGATAAATATATAAGGATACTTGCTAGAGATTGGAGGAGAAGGGTTAAAGGAATTGGTAGAGTGAAAAGAAATCCTGTACAATGTCTTCGCAAAAGATTGAAACTGGCCATCAAGATATGGTTCATGATGTACAAATGGATTACTATGGCAAACGCATAGCGACAGCTTCCTCTGATTTTACCATTAAAATTGTTGGCGTTAGCAAAGACTCTGGTTCACAAATCTTAGCTACCTTAAATGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCGCACCCTAAGTTTGGTTCAATGGTAGCTTCCAGCTCTTATGATGGTCAAGTGATAATCTGGAAGGAAGGAAATCAAAATCAATGGTCTCAGGCTCATGTTTTTAGTGCACACAAGTCTTCGGTGAACTCTATTGCCTGGGCACCACATGAACTTGGCCTCTGTTTGGCCTGTGGATCATCTGATGGAAGTATATCGGTCTTTATTGCCAGATCTGATGGTGGCTGGGACAATAATCCAATTGAACAAGCCCACCCTGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCTGGTTCCTTAGTTGGATCCAGTTCAGAGGATCCTGTTTGGAAGCTAGCTTCCGGGGGCTTCGATAGTTCAGTGAAGGTTTGGACACTCAAAGATGGAAGCTGGAGGAGGGATTCCTCCCTTTCCCTTCAGATTCACACTGATTGGGTGAGAGATGTGGCTTGGTCGCCAAACCTAGGGCTTCAAAAATCCACCATTGCAAGTGGTTCTCAGGATGGGACAGTGATTATTTGGTCAACAAAGGAAGGAGGGAAATGGGATGCTACACTGGTGAATGATTTTAAGACTCCCATCTGGAAGGTTTCGTGGTCATTGACTGGAGACTTGTTGGCTGTTTCTGATGGGAATAACCATATTACCTTGTGGAAAGAAGGAACCGGTGGTAAATGGCAGCAAGTAACTACAGTTGAACCTTAGGTTATTCATTCTTAGTCTTTATCATTCCATTGTGTTTTGTGTCTTGTCAGTAGCATGTTGCTCGATATTGTTAAACACTTTCCCTGTATTTAGTTCACAATCTTTTGTACTATCATTGCATGTTTTCATAACTTTTAATCAGATTTTGAGGGTGAGAAATGAGTAATATTTTATGCATTTATTTAAATTCCCAGGTTCTGGCCGTTTTATTGATCAACTACTAGAAATAGAATTCTATTCTTTAATGTTTTTCTTTTGAAAGAATAATAGAAAGAAATCAAACTTCTGTTAAGAAAATGGAGAAGGAAAATACATTGCCTTTTACCACAGAAAGAGACGCTTGCA

Coding sequence (CDS)

ATGTCTTCGCAAAAGATTGAAACTGGCCATCAAGATATGGTTCATGATGTACAAATGGATTACTATGGCAAACGCATAGCGACAGCTTCCTCTGATTTTACCATTAAAATTGTTGGCGTTAGCAAAGACTCTGGTTCACAAATCTTAGCTACCTTAAATGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCGCACCCTAAGTTTGGTTCAATGGTAGCTTCCAGCTCTTATGATGGTCAAGTGATAATCTGGAAGGAAGGAAATCAAAATCAATGGTCTCAGGCTCATGTTTTTAGTGCACACAAGTCTTCGGTGAACTCTATTGCCTGGGCACCACATGAACTTGGCCTCTGTTTGGCCTGTGGATCATCTGATGGAAGTATATCGGTCTTTATTGCCAGATCTGATGGTGGCTGGGACAATAATCCAATTGAACAAGCCCACCCTGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCTGGTTCCTTAGTTGGATCCAGTTCAGAGGATCCTGTTTGGAAGCTAGCTTCCGGGGGCTTCGATAGTTCAGTGAAGGTTTGGACACTCAAAGATGGAAGCTGGAGGAGGGATTCCTCCCTTTCCCTTCAGATTCACACTGATTGGGTGAGAGATGTGGCTTGGTCGCCAAACCTAGGGCTTCAAAAATCCACCATTGCAAGTGGTTCTCAGGATGGGACAGTGATTATTTGGTCAACAAAGGAAGGAGGGAAATGGGATGCTACACTGGTGAATGATTTTAAGACTCCCATCTGGAAGGTTTCGTGGTCATTGACTGGAGACTTGTTGGCTGTTTCTGATGGGAATAACCATATTACCTTGTGGAAAGAAGGAACCGGTGGTAAATGGCAGCAAGTAACTACAGTTGAACCTTAG

Protein sequence

MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVWQVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCLACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLASGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIWSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVEP

Homology

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BLAST of Cucsat.G12744 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 4.1e-135
Identity = 222/302 (73.51%), Postives = 260/302 (86.09%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           M  QKIETGH+D+VHDVQMDYYGKRIATASSD TIKI GVS + GSQ LATL GH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           +VAWAHPK+GS++AS SYDGQVI+WKEGNQNQW+Q HVF+ HKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDG+ISVF AR+DGGWD + I+QAHPVGVTSVSW P TAPG+LV S   DPV+KLA
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG D++VKVW L +GSW+ D   +LQ HTDWVRDVAW+PNLGL KSTIASGSQDG VII
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WST-KEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           W+  KEG +W+  ++ DF TP+W+VSWSLTG+LLAVSDGNN++T+WKE   G+W+QVT V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

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BLAST of Cucsat.G12744 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 4.6e-134
Identity = 220/302 (72.85%), Postives = 254/302 (84.11%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           M  QKIETGH D +HDV MDYYGKR+ATASSD TIKI GVS   GSQ LATL GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++AS SYDGQ+I+WKEGNQNQW+QAHVF+ HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD   I+QAHPVGVTSVSW P T PG+LV S   DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGG DS+VKVW   +GSW+ D   +L  HTDWVRDVAW+PNLGL KSTIASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WST-KEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           W+  KEG +W+ T++ DFKTP+W+VSWSLTG+LLAVSDGNN++T+WKE   G+W+QVT V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

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BLAST of Cucsat.G12744 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 319.7 bits (818), Expect = 3.5e-86
Identity = 151/300 (50.33%), Postives = 204/300 (68.00%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V ++ G  ++A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G+++AS SYD +VIIWKE N   W + H  S H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGS-SSEDP--VWKLASG 185
           DG+IS+     +G W+   I  AH +G  +VSW P   PGSL+   S + P  + K ASG
Sbjct: 128 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSSVKVW-TLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    L+ H+DWVRDVAW+P++GL  STIAS SQDG V IW
Sbjct: 188 GCDNLIKLWREEEDGQWKEEQ--KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 247

Query: 246 STKE--GGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           +  +  G  W   L++ F   +W VSWS+T ++LAVS G+N +TLWKE   G+W  ++ V
Sbjct: 248 TCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Cucsat.G12744 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.5e-86
Identity = 151/300 (50.33%), Postives = 204/300 (68.00%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V ++ G  ++A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G+++AS SYD +VIIWKE N   W + H  S H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGS-SSEDP--VWKLASG 185
           DG+IS+     +G W+   I  AH +G  +VSW P   PGSL+   S + P  + K ASG
Sbjct: 128 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSSVKVW-TLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    L+ H+DWVRDVAW+P++GL  STIAS SQDG V IW
Sbjct: 188 GCDNLIKLWREEEDGQWKEEQ--KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 247

Query: 246 STKE--GGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           +  +  G  W   L++ F   +W VSWS+T ++LAVS G+N +TLWKE   G+W  ++ V
Sbjct: 248 TCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Cucsat.G12744 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.7e-85
Identity = 149/300 (49.67%), Postives = 203/300 (67.67%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V ++ G  ++A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILVADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G+++AS SYD +VIIWKE N   W + H  + H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGS-SSEDP--VWKLASG 185
           DG+IS+      G W+   I  AH +G  +VSW P   PGSL+   S + P  + K ASG
Sbjct: 128 DGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSSVKVW-TLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    L+ H+DWVRDVAW+P++GL  STIAS SQDG V +W
Sbjct: 188 GCDNLIKLWKEEEDGQWKEEQ--KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVW 247

Query: 246 STKE--GGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           +  +  G  W   L++ F   +W VSWS+T ++LAVS G+N +TLWKE   G+W  ++ V
Sbjct: 248 TCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Cucsat.G12744 vs. NCBI nr
Match: XP_004147452.1 (protein transport protein SEC13 homolog B [Cucumis sativus] >KGN59617.1 hypothetical protein Csa_001102 [Cucumis sativus])

HSP 1 Score: 629 bits (1621), Expect = 1.22e-227
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGP TAPGSLVGSSSEDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPMTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300
           WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE
Sbjct: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300

[Close]

BLAST of Cucsat.G12744 vs. NCBI nr
Match: XP_008443459.1 (PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >KAA0053715.1 protein transport protein SEC13-like protein B [Cucumis melo var. makuwa] >TYK17743.1 protein transport protein SEC13-like protein B [Cucumis melo var. makuwa])

HSP 1 Score: 617 bits (1590), Expect = 6.51e-223
Identity = 293/301 (97.34%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIV VSK+SGSQILATLNGHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVSVSKNSGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSSLSLQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSLSLQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300
           WSTKEGGKWDATL+NDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKE   GKWQQVTTVE
Sbjct: 241 WSTKEGGKWDATLMNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEAASGKWQQVTTVE 300

[Close]

BLAST of Cucsat.G12744 vs. NCBI nr
Match: XP_038905204.1 (protein transport protein SEC13 homolog B [Benincasa hispida])

HSP 1 Score: 590 bits (1521), Expect = 2.15e-212
Identity = 281/302 (93.05%), Postives = 292/302 (96.69%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MSSQKIE GHQDM+HDVQMDYYGKRIATASSDFTIKIV VSK+SGSQ+LATLNGHKGP+W
Sbjct: 1   MSSQKIEIGHQDMIHDVQMDYYGKRIATASSDFTIKIVSVSKNSGSQLLATLNGHKGPIW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDG+ISVFIARSDGGWDNN IE AHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA
Sbjct: 121 ACGSSDGNISVFIARSDGGWDNNQIEHAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWR+DSS  LQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSAVKVWTLKDGSWRKDSS-PLQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WS-TKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           WS TKEGGKWDATL+NDFKTPIWKVSWSLTGDLLAV+DGNNHITLWKE   GKWQQVTTV
Sbjct: 241 WSVTKEGGKWDATLMNDFKTPIWKVSWSLTGDLLAVADGNNHITLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Cucsat.G12744 vs. NCBI nr
Match: XP_022983840.1 (protein transport protein SEC13 homolog B-like [Cucurbita maxima])

HSP 1 Score: 578 bits (1489), Expect = 1.69e-207
Identity = 271/302 (89.74%), Postives = 288/302 (95.36%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MS+QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKI+ VSK+S SQ+LATLNGH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSM+ASSSYDGQVIIWKEGNQNQW QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMIASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+N IEQAHPVGVTSVSWGPTTAPGSLVGS S DPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPTTAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSS +LQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WS-TKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           WS TK+GGKW+ T++NDFKTPIWKVSWSLTGDLLAV+DGNNH TLWKE   GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Cucsat.G12744 vs. NCBI nr
Match: KAG6580995.1 (Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017737.1 Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 576 bits (1484), Expect = 9.75e-207
Identity = 271/302 (89.74%), Postives = 287/302 (95.03%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MS+QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKI+ VSK+S SQ+LATLNGH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQW QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+N IEQAHPVGVTSVSWGP TAPGSLVGS S DPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPITAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSS +LQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WS-TKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           WS TK+GGKW+ T++NDFKTPIWKVSWSLTGDLLAV+DGNNH TLWKE   GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Cucsat.G12744 vs. ExPASy TrEMBL
Match: A0A0A0LG36 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G829070 PE=3 SV=1)

HSP 1 Score: 629 bits (1621), Expect = 5.91e-228
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGP TAPGSLVGSSSEDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPMTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300
           WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE
Sbjct: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300

[Close]

BLAST of Cucsat.G12744 vs. ExPASy TrEMBL
Match: A0A5A7UJ18 (Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00140 PE=3 SV=1)

HSP 1 Score: 617 bits (1590), Expect = 3.15e-223
Identity = 293/301 (97.34%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIV VSK+SGSQILATLNGHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVSVSKNSGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSSLSLQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSLSLQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300
           WSTKEGGKWDATL+NDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKE   GKWQQVTTVE
Sbjct: 241 WSTKEGGKWDATLMNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEAASGKWQQVTTVE 300

[Close]

BLAST of Cucsat.G12744 vs. ExPASy TrEMBL
Match: A0A1S3B8U3 (protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC103487045 PE=3 SV=1)

HSP 1 Score: 617 bits (1590), Expect = 3.15e-223
Identity = 293/301 (97.34%), Postives = 297/301 (98.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIV VSK+SGSQILATLNGHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVSVSKNSGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSSLSLQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSLSLQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSTKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTVE 300
           WSTKEGGKWDATL+NDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKE   GKWQQVTTVE
Sbjct: 241 WSTKEGGKWDATLMNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEAASGKWQQVTTVE 300

[Close]

BLAST of Cucsat.G12744 vs. ExPASy TrEMBL
Match: A0A6J1J720 (protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111482335 PE=3 SV=1)

HSP 1 Score: 578 bits (1489), Expect = 8.17e-208
Identity = 271/302 (89.74%), Postives = 288/302 (95.36%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MS+QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKI+ VSK+S SQ+LATLNGH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSM+ASSSYDGQVIIWKEGNQNQW QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMIASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+N IEQAHPVGVTSVSWGPTTAPGSLVGS S DPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPTTAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSS +LQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WS-TKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           WS TK+GGKW+ T++NDFKTPIWKVSWSLTGDLLAV+DGNNH TLWKE   GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Cucsat.G12744 vs. ExPASy TrEMBL
Match: A0A6J1FB15 (protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111442431 PE=3 SV=1)

HSP 1 Score: 573 bits (1476), Expect = 7.83e-206
Identity = 270/302 (89.40%), Postives = 285/302 (94.37%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIVGVSKDSGSQILATLNGHKGPVW 60
           MS QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKI+ VSK+S SQ+LATLNGH+GPVW
Sbjct: 1   MSEQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWSQAHVFSAHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQW QAHVF+AHKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNPIEQAHPVGVTSVSWGPTTAPGSLVGSSSEDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+N IEQAHPVGVTSVSWGP TAPGSLVGS S DPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPITAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSSVKVWTLKDGSWRRDSSLSLQIHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240
           SGGFDS+VKVWTLKDGSWRRDSS +LQ+HTDWVRDVAWSPNLGLQKSTIASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WS-TKEGGKWDATLVNDFKTPIWKVSWSLTGDLLAVSDGNNHITLWKEGTGGKWQQVTTV 300
           WS TK+GGKW+ T++NDFKTPIWKVSWSLTG LLAV+DGNNH TLWKE   GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGHLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

The following BLAST results are available for this feature:

BLAST of Cucsat.G12744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64740	4.1e-135	73.51	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9SRI1	4.6e-134	72.85	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9D1M0	3.5e-86	50.33	Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3	[more]
Q5XFW8	3.5e-86	50.33	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1	[more]
Q3ZCC9	6.7e-85	49.67	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1	[more]

BLAST of Cucsat.G12744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147452.1	1.22e-227	99.67	protein transport protein SEC13 homolog B [Cucumis sativus] >KGN59617.1 hypothet...	[more]
XP_008443459.1	6.51e-223	97.34	PREDICTED: protein transport protein SEC13 homolog B [Cucumis melo] >KAA0053715....	[more]
XP_038905204.1	2.15e-212	93.05	protein transport protein SEC13 homolog B [Benincasa hispida]	[more]
XP_022983840.1	1.69e-207	89.74	protein transport protein SEC13 homolog B-like [Cucurbita maxima]	[more]
KAG6580995.1	9.75e-207	89.74	Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Cucsat.G12744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG36	5.91e-228	99.67	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A5A7UJ18	3.15e-223	97.34	Protein transport protein SEC13-like protein B OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B8U3	3.15e-223	97.34	protein transport protein SEC13 homolog B OS=Cucumis melo OX=3656 GN=LOC10348704...	[more]
A0A6J1J720	8.17e-208	89.74	protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FB15	7.83e-206	89.40	protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 179..193 score: 36.42 coord: 229..243 score: 36.29 coord: 73..87 score: 32.01
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 45..86 e-value: 7.1E-7 score: 38.8 coord: 199..242 e-value: 3.6E-6 score: 36.5 coord: 2..39 e-value: 0.99 score: 17.0 coord: 92..133 e-value: 7.5E-4 score: 28.8 coord: 250..286 e-value: 1.1 score: 16.7 coord: 141..192 e-value: 0.81 score: 17.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 95..131 e-value: 0.0023 score: 18.7 coord: 47..86 e-value: 2.9E-4 score: 21.6 coord: 148..191 e-value: 0.09 score: 13.7 coord: 205..242 e-value: 2.9E-4 score: 21.6 coord: 5..37 e-value: 0.099 score: 13.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 206..246 score: 11.577833
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 52..86 score: 10.675542
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 99..132 score: 8.837541
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..301 e-value: 6.6E-92 score: 309.8
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..298
None	No IPR available	PANTHER	PTHR11024:SF18	BNAA05G12310D PROTEIN	coord: 1..298
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 52..86 score: 8.966513
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 206..246 score: 9.678328
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 8..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12744.T1	Cucsat.G12744.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090114	COPII-coated vesicle budding
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0031080	nuclear pore outer ring
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity