Cucsat.G12741 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12741
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ubiquitin receptor RAD23
Location	ctg1838: 3440683 .. 3446888 (-)
RNA-Seq Expression	Cucsat.G12741
Synteny	Cucsat.G12741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTTCTCTGATTACTCTCCATTCCCAATCTAGGGTTTTCTTTTCCTATTTTTCCCTTTCTCAATTTCTCCTCCTCCTCGCCATGAAGCTTACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAACCTACAGACACAGTCAGTTTTTTTCTCTTCCTTCTCACCTTCTTTTTTTTAATCTTCAATTCACTCACTTCTTTATGTTTCCTTTTTCATATTACCAAAATTTTAGGGTATTCAATTTCTGTTGCTCTTTTGCTGGATTATGTAAATTTGTCTATGAATTTTATATATGTAGTGATTTCTTTAGGGGTTCATCATTCCATTCCACCAATTAAATCACTGGTATTTCAGATTGTTGCATTCAAGGTTTTCCTTCCAGATTATTTTTTACTGTGTTTATCTTTTCTGTTTCTTCCTTAATTGTATTACTAGTTATGAACTTTTTTGAATGAGTTGCTCAGAAAACCCGTTTTTTTTTTTTTTTATATATATATATATTTCGAAAGTCAATTTCTTCTGCCCCTATGGGGACTAGTTACAATGTCCATTTGAATTGAAATTTCAGTCTTCTCGTGCCATGCACTATTTGGTTTTTTTTCGCCTAAATTTCTTATTATTTATTTATTTGAGTGTTCTATTTCTTTTAATTCCAACTATTCTTTGTAGGTCGTTATTATTTAGTGCTTCCAATTGCCAATATTTAAATGGCACCTTGATAGGTTATATGCCTAAGGTTGGCCTTGTTTAGCCTCAAGGTTTATTCCTTTATGGTTTTTTATTTTTTATTTTTTTTATAGAGGTTTATTCCATTTTGATTGATATTTAGTGAAGCTTTGTCCTTTTAGGTTTAGGATTTTTATGCTGCAAGCAAGGGCTAGAAGAGGATATCAAAGTACTCCGTATAAAATATCTTTTGTGGTTTAAAAATAATACAGAATGAGTTGTGTTTATTTAGCACATTAGTATCCTTACCACTAAGGCTTATGAAAGCACTTAAAAGGGAAAAATTAACAAAAGAATGTTCGTATTAGTGACAATGATGTTGAATTGATGCATAGTCTTTATTAAGAAACTAAAATTTGTGGACGCTTAGCTTTTTTGCTTTCGTACTTTTATATAATCATTATATTTGATAATTGTAATATGATTTAAATTTTTATGGTAATTCTTCAGATTGGGGGTTTGTGTTTCATCTCTTTGTTAGCAAAAGTGTTGAGTGGTTGTTGTCTGCCTTTCAGTACAGCGATGATGTCATAAAAATCAGATGAAAGTCATAAATAATTTAGAAACAAATAAACTAAATGAGTGGTTGTTGTCTGTCTGCTTGTTTCCTTTTCTTTTTTGTTATTTTGAATGATTTTATTTGCCTATTCTAGATCTTATACAAGTAGATAATGGACTGCGATTTTGGGAAGACAATTATTGGGCTTGCTCCTGCTTTGTCTTTGTTTTGGACTCTTTTATTTGGAACTTGTCTTTTAGGTGGCATATGAGACACGAGGAAAGTTAGGGCTAGGCATATCTGATATCATCTGTAATCTATGTGCGAAATTATCGTCTAACATCCAGACAAACTGGTATTTGGTTGGACTTTAGTTAAAATCTTTGTTCTTTGGATATTCAGGGTTTTGTTTGGAAAGTTTCTTTTAGTGAAATTTATTCAATTGATAAAATTTACAAGAGCTGCTACCTCATGCCCCCCAATCTTCTCGTGGTAGTGTTGGGCTTCTTTTTGTAGGCCTGTTTTGGTATACCCTTGTACATTCTCTTTCATTTTCCTCAATAAAATGAAAAGCCCCCTACTCCTTTGAAATACCTTCTCCACGTCCATGAAAGGAAAGGGGACACTTAACACTTGTTTGGTCACAATTACATTGATCAAAGCTCATAGCTAAATTGTGGAACACTGTGCCGGTTTATTTTCCTTTAACTTATACTCACTCCTCAAAGGCTTATTTAGACTCTAGATTATCTTGATTACTTGATGGATGGAGTTTTTGCTACTTTTATGAACTAGCAGAAGTCAGGAGGTAGGATTATAATGCATGGCATGAGATTTGAGACTGGTTGAACAACCCCCCCCCAAGCTTTGTATTATGTTTCTTTTGAGAAGTACATTGTCTTTTGAATAGCTGAGTGTACGTTGGTGATACGTCAATCGAGCTGGAAATTTTTACTTTTGCACGAGTTAAAATATTTCTTAATATATGAAGTAGTTTGTATTTTATTTCTTTTATTGAATGTTTTACGTTTGTCCATCTAACTAGGTATTGGGTGTAAAGAAGAACATTGAGAATGTACAAGGAAAAGATAGTTATCCTTGCAGCCAGCAATTGTTAATCCACAATGGGAAAGTTTTAAAAGATGAAACAACGTTGACAGAGAACAAGATTACTGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGGTACGTCGTGTTGTGGCCAACTTGGATAACCTTTCAGAAATTATTAAACTGCCTTTCTGACTATTATCTTGCATCATATTTAAATGGCTATGGTGGACTAATGTACTACACGATAGTCTTCTTTTTCATTGTGCAAATTGCTGATCCAATTCTTTGTGGTATGCCATTAGTAATGTAGAATATTTCAAGATAGTGGATTGATGTTTATATTTTATGAGTTAACATGTCTTTATATAAGACCAATGCTTATACAAGAGCTCTTGATCTTGATTCCATTTTTGTTTATAGTTTCTTCATGTTGCTTAATTCTTTTGATAGGCTTAATCTCTTAATAATAGTTGTTGCCAGTGTCACAGGCGGGTTGTCTCATGAGATTAGTCAAGGTGTGTTTAAACTGGTTTGGACACTCACGGAGATCGGAAAAAAAAAAAACACCATAGTTGTTGTGCAGGAACAGTTTTGTGACTAGTTGTCTAGTAGTCCAATGCTAGGTCTCTGGAATCTGAAGCCTAGATTTGCTTGTTGGAAATAGTGTAAACTTTTATCATTTTGTTTGATGTTAACTACCTATCTGGTGTTAGATAATATCTTTATTTGTCCTGTAAAAGGAGGAGTTATAGTTCTATCAAACTGAGAGCTCTACATTCTCAGAAGTGAAGCATCTCACTTAACGGTTTTAATTTTCAACCGTTGTTAAGTGAAACACCCAATTGAGCTACCATAAATTTAATGTCACAGGAGATTATTTTGTTATTCTCTCCATTATCCTTCTCCTGAATAGTGGTTGCATGTATCTATGGATCTCTGAAGAGTTTTGATTAAACATCAGGCACCCTTTTAATTCATTGCAATCCCTTCTTTTTCTGATGTTTCTTATGTCACATGGTTTTCAACTCTTCCGCTCACTTATATCCTTTATACAGAGTAAAGCACCTGGTTCAACTGGGTCATCATCTACTCAGGTTAAATATATTTCTTTGTTCATTTTATTTTCAGGTCATTATGTTTAATGCACATTTCTCTCTCAACTAATGTTTGTATGTCTACCTGACAGACGACGACTATTGTACCTACAACTACTCCAACACCGAATTCTACTTCAATCCCTGAAGCTCCTGCACAACCAGCGTGAGTCTATTGATGATGCCAACTCAACTTAGTGTCTATTACCCCTTGGCAGCATATCAGCTTGATAATTCTATATATTTCTCTGTGCTTGCTTTTTCAGAGCCTCCAGGAATGTTGCTATTTCAGATGTGCCAACTGCTAAGTATGAACACAGTTTCTGCTTTTTGTTGTATCATTTTGTATTTATGATTTTCTATTCAAAAGTTTTCCTGTTTACTCTTGAAGTTCCTTTATGTGATTAAGACAGATGGTCAAACTTAAATAGGATAAAGTATCTAATATTTTGTCATGTTGCAGTGCTCAAATTGATACATATGGACAAGCTGCGTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACCATTCAAGAAATAATGGATATGGGTGGTGGCAGCTGGGATAGAGAAACAGTCACTCGTGCACTTCGAGCAGCTTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGTATGTTTTACCACTTCACTAATAGATAGTCTTTCAGCTGACTCCTTCCTATTTATTGTTACCGAACTTGGCTTTATATTCAGGGTATTCCAGAAACCGCAGAAGTTGCAGCCCCTGTGGCTCGTCCACCGACTGGCCAGCCTATAGACGCAGGTGGTGCGACTGCTCCTCCTGTTTCTGGAGGTCCCAACTCGTCTCCCCTCAACATGTTTCCGCAGGTAAAATTTTGTCCTTCAAATTTTGTCCTTGTTCTTTTTAAATTTTCATTGAGAGCTAGTGGTTTAGGAGTCCCTTGCTGCTGCTGCTGGTGGGGGTGGAGGAAGCCTTGGATCTCTTGAGTTCCTTAGGAATAACCCACAGGTATGCTTTAATTTTTACTGTCTACCTAGATTTTTGTTGGACTATAGTTTGGAAATTCCTACGGGCTTCTTATCAGTGATCACTTTCCATTGGGCATGATTAAGAACCATTTTGATCATAACGTGTCAGTAATATTTTCTGCCAAGTTATTTAGCCATGATACTTCCTGTTTAAGTGTCTTGTTAATTGAAAAGATGCTCAGTCAAACTTGAGAGAATAAACTTTCCAACAATTGAGGGGCCAAGTTTTAATTAATTGCCCGCATATGATCTGTTTAGGCTTCCCTCCTTCCCCTCCTCTCTTTTTGTTGTTATTGGAAACAATGCTGACAAATTTGATATGTACTGTTACTGTCCCTGTGGATTATAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTGCAGGTCTGTGTTTATCTGATTTCTTTCTCATCAACTTCAAATTTACTTGTTCTTTTGGCTAGATCTAAAGTTGTGAACTTGGGCTTGGTTTCAGGCTATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAACTTTTGAGATTGATCCAGGACCATCAAGCAGAGTTTCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTTGAAGGGCAAGTTTTCTCGCCCATTTGTGGCCATTGATTTTTATTTTCATATTGAAATTTATATGACCTATCCAAATTTTCATTTTCTTCCAGGGATCTGTTTGACCAGCCTGATCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATTGAACGAGTAAGTTGTCTTCACTTATATACTTTGCTCTATCGAGCAACAAAGACTAATCTATTTACCATCTTCTCGCCCTTGCTGGCATTTGTAGTTGGAAGCAATGGGGTTTGATAGGGATCAAGTCATTGAGGCCTTTTTAGCTTGTGATCGCAATGAGGAATTGGCTGCCAACTATCTTTTGGAACATGGTGGCGAATTTGAGGATTAAATGGTGAACTTCATCACATTTGATGAATAGATTTTTTTTTTTTTTTTTCTTCGTTGGTTAGATGGATCCATGGTATCTGTTAGCATCTAAGGTTCGAAGTTTCTTCTTTCAGTACTTCCAATAATGCTTTTTCTTTAGAACATTTTAAAGTTATTTGGCACATATGAATCATCAAATATAGAACGTTGAGAGAATAGCAATTAGATTAAGGCATGAATGCAGCATAACTATAAGCTCAAAGCTAGTTTGCTCGTGTTAACGTTTCAGGTAACGTCAAGCGTGGCGTAATTAGACATTGGAAAAGGTGGGTTTTCTTGATATCAATTGATTATTCTTTGAACAGAATTGAAGTTATGTTGTTCAATGAGGAAGAAAAATGAGGAAATCCCAACAGAGTCACTGGACGAAAGAGCATAACAGTTCGGCTTATTGTTTATCTGTTTGAATTTGTTTGATAACTTTGGGTTAAAGTTAGATTCATATTATTATTATGATCATTTCTAGGTTAAACATGGTTTATTAATAGAATAGTTTTTGAACAATTTTAAATTATGCTTTTAAGTTTGTCTTCAAATTATGTGTAGACTAATAATTTTAAATTACGTCTTCATATAGTTCGATAAAAGCAAAATGGAATTGAAGGATGGTTTCGTCGTTTTTTGTGTAGTTAATCTGGATGTGTTTCATTTTAATTAGTTCCTATATTTTGTGATGTACTATC

Coding sequence (CDS)

ATGTTTCTTATGTCACATGGTTTTCAACTCTTCCGCTCACTTATATCCTTTATACAGAGTAAAGCACCTGGTTCAACTGGGTCATCATCTACTCAGACGACGACTATTGTACCTACAACTACTCCAACACCGAATTCTACTTCAATCCCTGAAGCTCCTGCACAACCAGCAGCCTCCAGGAATGTTGCTATTTCAGATGTGCCAACTGCTAATGCTCAAATTGATACATATGGACAAGCTGCGTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACCATTCAAGAAATAATGGATATGGGTGGTGGCAGCTGGGATAGAGAAACAGTCACTCGTGCACTTCGAGCAGCTTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGGTATTCCAGAAACCGCAGAAGTTGCAGCCCCTGTGGCTCGTCCACCGACTGGCCAGCCTATAGACGCAGGTGGTGCGACTGCTCCTCCTGTTTCTGGAGGTCCCAACTCGTCTCCCCTCAACATGTTTCCGCAGGAGTCCCTTGCTGCTGCTGCTGGTGGGGGTGGAGGAAGCCTTGGATCTCTTGAGTTCCTTAGGAATAACCCACAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTGCAGGCTATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAACTTTTGAGATTGATCCAGGACCATCAAGCAGAGTTTCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTTGAAGGGGATCTGTTTGACCAGCCTGATCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATTGAACGATTGGAAGCAATGGGGTTTGATAGGGATCAAGTCATTGAGGCCTTTTTAGCTTGTGATCGCAATGAGGAATTGGCTGCCAACTATCTTTTGGAACATGGTGGCGAATTTGAGGATTAA

Protein sequence

MFLMSHGFQLFRSLISFIQSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED

Homology

[Close]

BLAST of Cucsat.G12741 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 474.9 bits (1221), Expect = 7.9e-133
Identity = 261/379 (68.87%), Postives = 304/379 (80.21%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIE+ QGKD+YPC QQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+TE+GFLVVMLSKSK+ GS G +S QT+++    + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 ISDVPTAN---AQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNN 180
            S +P      AQ DTYGQAAS LVSG++LEQ +Q+IM+MGGGSWD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+TAEVA PV   P  Q   +G A   P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEF 300

Query: 301 LQ-------------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACD 360
           LQ             D+FDQP+Q+MPHAINVTPAEQ+AI+RLEAMGFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 360

Query: 361 RNEELAANYLLEHGGEFED 364
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 371

[Close]

BLAST of Cucsat.G12741 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 459.1 bits (1180), Expect = 4.5e-128
Identity = 255/382 (66.75%), Postives = 298/382 (78.01%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V PTDT++ VKKNIE+ Q KD+YPC QQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQ-----TTTIVPTTTPTPNSTSIPEAPAQPAA 120
           ENK+TE+GFLVVMLSKSK   S G SSTQ     T+TI  TT   P++T     P    A
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVP----A 120

Query: 121 SRNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAY 180
           S +  + + PT  AQ DTYGQAAS LVSG+++EQ +Q+IM+MGGGSWD+ETVTRALRAAY
Sbjct: 121 SNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAY 180

Query: 181 NNPERAVDYLYSGIPETAEV-AAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQES 240
           NNPERAVDYLYSGIPET  + A  ++   +G+ +     TAPP SGGPNSSPL++FPQE+
Sbjct: 181 NNPERAVDYLYSGIPETVTIPATNLSGVGSGREL-----TAPPPSGGPNSSPLDLFPQEA 240

Query: 241 LAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQ 300
           ++ AA   GG LG+LEFLR N QFQ LRSMV +NPQILQ MLQELGKQNPQLLRLIQ++Q
Sbjct: 241 VSDAA---GGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 300

Query: 301 AEFLQ-------------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFL 360
           AEFLQ             D+FDQPDQ+MPH++NVTP EQ++IERLEAMGFDR  VIEAFL
Sbjct: 301 AEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFL 360

Query: 361 ACDRNEELAANYLLEHGGEFED 364
           +CDRNEELAANYLLEH  +FED
Sbjct: 361 SCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Cucsat.G12741 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 369.8 bits (948), Expect = 3.6e-101
Identity = 210/381 (55.12%), Postives = 268/381 (70.34%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MK+ VKTL GS+F+IEV+P D V  VK  IE V+G + YP ++Q+LIH GKVLKDETTL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKITEDGFLVVMLSKSKA--PGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRN 120
           EN + E+ F+V+MLSK+KA   G++ +S+   +   P T  TP  ++   +   P +   
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAPTASVPVPTSGTA 120

Query: 121 VAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNP 180
            A +    A+ Q D YGQAASNLV+G  LE T+Q+I+DMGGGSWDR+TV RALRAA+NNP
Sbjct: 121 TAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNP 180

Query: 181 ERAVDYLYSGIPETAEVAAPVARPPTGQ----PIDAGGATAPP--VSGGPNSSPLNMFPQ 240
           ERAV+YLYSGIP  AE+      P TG+    P+      A P   +GGPN++PLN+FPQ
Sbjct: 181 ERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFPQ 240

Query: 241 ESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQD 300
              AA AG G    G+L+FLRN+ QFQALR+MVQANPQILQ MLQELGKQNPQL+RLIQ+
Sbjct: 241 GMPAADAGAGA---GNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQE 300

Query: 301 HQAEFL----------QDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLA 360
           HQA+FL          +++ +Q +  MP A+ VTP E++AIERLE MGFDR  V+E F A
Sbjct: 301 HQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFA 360

Query: 361 CDRNEELAANYLLEHGGEFED 364
           C++NEELAANYLL+H  EFED
Sbjct: 361 CNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Cucsat.G12741 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 365.9 bits (938), Expect = 5.2e-100
Identity = 220/424 (51.89%), Postives = 279/424 (65.80%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MK+ VKTLKG+HF+IEV+P D+V+ VKKNIE+VQG D YP ++Q+LIH GKVLKDETT+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKITEDGFLVVMLSKSK----APGSTGSSSTQTTTIVPTTT------PTPNSTSIPEAP 120
           ENK+ E+ F+V+M++KSK    A  S  + ++Q  +I P+T+       TP S S P AP
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 A-------------QPAASRNVAISDVP-----------------TANAQIDTYGQAASN 180
           A              P A+     + +P                    +Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVA 240
           L +G+NLE TIQ+I+DMGGG+WDRETV  ALRAA+NNPERAV+YLY+GIPE AEV  PVA
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEV-PPVA 240

Query: 241 RPP--TGQPIDAGGATAPPV---SGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNN 300
           RPP   GQP +    T  P    + GPN++PL++FPQ        GG    G+L+FLRN+
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQ---GLPNVGGNPGAGTLDFLRNS 300

Query: 301 PQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQDLFDQP---------- 360
            QFQALR+MVQANPQ+LQ MLQELGKQNP L+RLIQDHQA+FL+ L ++P          
Sbjct: 301 QQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLR-LINEPVEGGGESGNL 360

Query: 361 ------DQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGG 364
                     P AI VT  E++AIERLEAMGF+R  V+E F AC++NEELAANYLL+H  
Sbjct: 361 LGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMH 419

[Close]

BLAST of Cucsat.G12741 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 7.5e-91
Identity = 197/390 (50.51%), Postives = 254/390 (65.13%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MK++VKTLKGS FQIEV     V  VK+ IE  QG+  YP  QQ+LIH GKVLKD+TTL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+ E+ FLV+ML + K   S+  ++++  +     T T  +    +AP  PA +  V 
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVT 120

Query: 121 IS-DVPTANA----------QIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTR 180
           +S   PTA A          + D YGQA SNLV+G+NLE TIQ I++MGGG WDR+ V  
Sbjct: 121 VSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLH 180

Query: 181 ALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPP----VSGGPNSS 240
           AL AA+NNPERAV+YLYSG+PE  ++  P        P  A  AT P     +S GPN+S
Sbjct: 181 ALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSGPNAS 240

Query: 241 PLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQ 300
           PL++FPQ    A+    G  LG+L+ LRNN QF+ L S+VQANPQILQ +LQELGKQNPQ
Sbjct: 241 PLDLFPQALPNASTDAAG--LGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQ 300

Query: 301 LLRLIQDHQAEFL------------QDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDR 360
           +L+LIQ++QAEFL            ++L DQ  + MP  I VTP E +AI RLEAMGFDR
Sbjct: 301 ILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDR 360

Query: 361 DQVIEAFLACDRNEELAANYLLEHGGEFED 364
             V++ F AC+++E+LAANYLL+H  EF+D
Sbjct: 361 ALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Cucsat.G12741 vs. NCBI nr
Match: XP_004147454.1 (ubiquitin receptor RAD23b [Cucumis sativus] >KGN59613.1 hypothetical protein Csa_002691 [Cucumis sativus])

HSP 1 Score: 685 bits (1768), Expect = 9.02e-248
Identity = 363/374 (97.06%), Postives = 363/374 (97.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. NCBI nr
Match: XP_008443453.1 (PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo] >XP_008443454.1 PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo])

HSP 1 Score: 676 bits (1743), Expect = 5.82e-244
Identity = 358/374 (95.72%), Postives = 359/374 (95.99%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPC QQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNSTSIPEAP QPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPT QPI+AGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. NCBI nr
Match: XP_038905754.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])

HSP 1 Score: 663 bits (1710), Expect = 5.98e-239
Identity = 352/374 (94.12%), Postives = 356/374 (95.19%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPC QQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPN TSIP+AP QPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNPTSIPQAPTQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPT QPI+ GGATAP VSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIETGGATAP-VSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 373

[Close]

BLAST of Cucsat.G12741 vs. NCBI nr
Match: KAG7017735.1 (Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 649 bits (1673), Expect = 2.69e-233
Identity = 340/374 (90.91%), Postives = 350/374 (93.58%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPC QQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNST IPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+ QPI+ GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. NCBI nr
Match: XP_023527347.1 (ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527348.1 ubiquitin receptor RAD23b-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023527350.1 ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649 bits (1673), Expect = 2.69e-233
Identity = 340/374 (90.91%), Postives = 350/374 (93.58%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPC QQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTT VP TTPTPNSTSIPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPITTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+ QPI+ GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. ExPASy TrEMBL
Match: A0A0A0LCV4 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1)

HSP 1 Score: 685 bits (1768), Expect = 4.37e-248
Identity = 363/374 (97.06%), Postives = 363/374 (97.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. ExPASy TrEMBL
Match: A0A1S3B8V4 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1)

HSP 1 Score: 676 bits (1743), Expect = 2.82e-244
Identity = 358/374 (95.72%), Postives = 359/374 (95.99%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPC QQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNSTSIPEAP QPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPT QPI+AGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. ExPASy TrEMBL
Match: A0A6J1J0D2 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1)

HSP 1 Score: 642 bits (1656), Expect = 5.07e-231
Identity = 336/374 (89.84%), Postives = 349/374 (93.32%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPC QQLLIHNGKVLKD+TTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDDTTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGS+GSSSTQTTT VPTT PTPNST IPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSSGSSSTQTTTNVPTTIPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+ QPI+ GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ- 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ 
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 ----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
                     DLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDR+QVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDREQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 363
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cucsat.G12741 vs. ExPASy TrEMBL
Match: A0A6J1F959 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1)

HSP 1 Score: 637 bits (1643), Expect = 5.03e-229
Identity = 339/376 (90.16%), Postives = 349/376 (92.82%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPC QQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNST IPEAPAQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+ QPI+ GG TAP  SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAP-TSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 --GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300
             GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL
Sbjct: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300

Query: 301 Q-----------DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNE 360
           Q           DLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNE
Sbjct: 301 QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE 360

Query: 361 ELAANYLLEHGGEFED 363
           ELAANYLLEHGGEFED
Sbjct: 361 ELAANYLLEHGGEFED 375

[Close]

BLAST of Cucsat.G12741 vs. ExPASy TrEMBL
Match: A0A5A7UF49 (Ubiquitin receptor RAD23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00110 PE=3 SV=1)

HSP 1 Score: 632 bits (1630), Expect = 2.97e-227
Identity = 336/352 (95.45%), Postives = 337/352 (95.74%), Query Frame = 0


Query: 23  VLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGS 82
           VLGVKKNIENVQGKDSYPC QQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGS
Sbjct: 11  VLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGS 70

Query: 83  TGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVAISDVPTANAQIDTYGQAASNLV 142
           TGSSSTQTTT VPTTTPTPNSTSIPEAP QPAASRNVAISDVPTANAQIDTYGQAASNLV
Sbjct: 71  TGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLV 130

Query: 143 SGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARP 202
           SGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARP
Sbjct: 131 SGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARP 190

Query: 203 PTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALR 262
           PT QPI+AGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALR
Sbjct: 191 PTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALR 250

Query: 263 SMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ-----------DLFDQPDQDMPH 322
           SMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ           DLFDQPDQDMPH
Sbjct: 251 SMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPH 310

Query: 323 AINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 363
           AINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED
Sbjct: 311 AINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 362

The following BLAST results are available for this feature:

BLAST of Cucsat.G12741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	7.9e-133	68.87	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	4.5e-128	66.75	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L30	3.6e-101	55.12	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	5.2e-100	51.89	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	7.5e-91	50.51	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Cucsat.G12741 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147454.1	9.02e-248	97.06	ubiquitin receptor RAD23b [Cucumis sativus] >KGN59613.1 hypothetical protein Csa...	[more]
XP_008443453.1	5.82e-244	95.72	PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo] >XP_008443454.1 PREDICT...	[more]
XP_038905754.1	5.98e-239	94.12	ubiquitin receptor RAD23b-like [Benincasa hispida]	[more]
KAG7017735.1	2.69e-233	90.91	Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023527347.1	2.69e-233	90.91	ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02352...	[more]

BLAST of Cucsat.G12741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCV4	4.37e-248	97.06	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1	[more]
A0A1S3B8V4	2.82e-244	95.72	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1	[more]
A0A6J1J0D2	5.07e-231	89.84	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1	[more]
A0A6J1F959	5.03e-229	90.16	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1	[more]
A0A5A7UF49	2.97e-227	95.45	Ubiquitin receptor RAD23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 147..187 e-value: 1.6E-5 score: 34.4
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 147..185 e-value: 5.5E-15 score: 54.9
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 145..188 score: 12.787865
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 6.6E-22 score: 88.8
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 1.5E-17 score: 63.1
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 19.216
None	No IPR available	GENE3D	1.10.8.10		coord: 140..190 e-value: 3.4E-22 score: 80.0
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 1.0E-26 score: 94.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..116
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..197
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..197
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 141..190 e-value: 1.83902E-32 score: 111.55
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 2.34206E-34 score: 116.888
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..201 e-value: 7.0E-66 score: 220.9
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..85
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 143..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12741.T15	Cucsat.G12741.T15	mRNA
Cucsat.G12741.T17	Cucsat.G12741.T17	mRNA
Cucsat.G12741.T16	Cucsat.G12741.T16	mRNA
Cucsat.G12741.T2	Cucsat.G12741.T2	mRNA
Cucsat.G12741.T4	Cucsat.G12741.T4	mRNA
Cucsat.G12741.T8	Cucsat.G12741.T8	mRNA
Cucsat.G12741.T11	Cucsat.G12741.T11	mRNA
Cucsat.G12741.T14	Cucsat.G12741.T14	mRNA
Cucsat.G12741.T1	Cucsat.G12741.T1	mRNA
Cucsat.G12741.T5	Cucsat.G12741.T5	mRNA
Cucsat.G12741.T7	Cucsat.G12741.T7	mRNA
Cucsat.G12741.T6	Cucsat.G12741.T6	mRNA
Cucsat.G12741.T10	Cucsat.G12741.T10	mRNA
Cucsat.G12741.T3	Cucsat.G12741.T3	mRNA
Cucsat.G12741.T13	Cucsat.G12741.T13	mRNA
Cucsat.G12741.T9	Cucsat.G12741.T9	mRNA
Cucsat.G12741.T12	Cucsat.G12741.T12	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding